| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13471364
Identifier: 13471364
GI number: 13471364
Start: 1102406
End: 1103605
Strand: Reverse
Name: 13471364
Synonym: mll1313
Alternate gene names: NA
Gene position: 1103605-1102406 (Counterclockwise)
Preceding gene: 13471365
Following gene: 13471362
Centisome position: 15.68
GC content: 63.42
Gene sequence:
>1200_bases ATGTCCACCCATGTGCGCCATCCGATCTGGCTCCCGGCCCTCAGGGCCGCGGATGCGCGCACCTTCGCCTCGCTCTATGC GGTCGAATCCTTCGCCCGCGCCACGGTGTCGAGCGTCATCCCAATCCAGGCCTACGAAATCCTGCACAACGAGCAGATCG TCTCGATCCTCTACACCATCGTGGCGCTGCTCGGCCTGTCGGTGACCTTGTTCATGCCGATGCTGATCCGCCGCTTTGCC CGGCGCTGGGTCTACACCGCCGGCGCCTGCCTGCTCGCCATCGGTTCGCTGTTCTTCGTCACCCACACGCTGGCCGGGCA ATTGGCAGGCATGCTGTGTCGGGTGATGGGCGCCAGTGCGCTTTCGATCACGCTCAACCTCTACATCATGGACCACATCC GCAAGACCGACTTCATGCAGGCAGAATCGCTGCGCATGGCGTGGTCGATGTTCGCCTGGACCGGCGGTCCGACGCTCGGC ATCTTCCTCTACACCCGCTTCGGCATCTACGCCGCGCATGGCGCGGTTGCGGTGTTCGCGCTGGCGCTCTTGGCGCTGTT CTGGACCTATCGACTGGGCGACAACCCATCGATCCGACCCGGCAAGACACGGCCGGCGAATCCGCTCGCCAATATCGGCC GCTTCGTCGCGCAGCCGAGATTGAGGCTTGCCTGGCTGATCGCCTTCGGCCGCTCCTGCTTCTGGACGACATTCTTCGTC TATGGGCCACTGTTCATGGTGATCACCGGCGAGGGTAAGCTGGCCGGCGGCCTGCTGGTTTCGGCCGGCAACGCGCTTTT GTTCATGGCGATTTTCTGGGGCAAGGCCGGAAAACGCTTTGGCGGCCGGCGCACCATGACATTCGCCTATTTCGCCATGT CGGCGATGCTTCTGGCGGCGGGTGTCGTCGGCGAAACCGTGCCGCTGCTCACCGGCGCCTTCCTGCTGTGTGGCGCCTTT TTCACCATAGCGCTCGATGCGTTGGGCTCGACCGCCTTCATGCGTTCGGTGCGCTCCTATGAACGGGCGCAGATGGCGGC GGTCTATCGTACTTATCTCGACTTTTCCGAACTCACGCCGCCGCTGGTCTATTCGGTGGTGCTGGCCTTCTTCGGACTGG GCTCGGTGTTCGTCACGCTCGGCCTGCTGGCGGCGGTTTGCGGTTTTGTCACGTGGCGTTACTTGCCGAAGTCTCTCTGA
Upstream 100 bases:
>100_bases TTGACCGACTTCGCTTTTCACGGCCTATGCGTCGGTTTCCTCTTAATCGCCCGGGAACGGCCAAGGCAGATTTGGCCGGT GATTCTGCTTTGGGGAAGCA
Downstream 100 bases:
>100_bases CGATCAGGGCTTTGGTACAAGCGCCGCGTGGCGCTCGCGCACCCAGTTGTGGAAGCGGTGTAGTTCATACTCCTCCGGCA TGAGCACGCCGGCCTGGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 399; Mature: 398
Protein sequence:
>399_residues MSTHVRHPIWLPALRAADARTFASLYAVESFARATVSSVIPIQAYEILHNEQIVSILYTIVALLGLSVTLFMPMLIRRFA RRWVYTAGACLLAIGSLFFVTHTLAGQLAGMLCRVMGASALSITLNLYIMDHIRKTDFMQAESLRMAWSMFAWTGGPTLG IFLYTRFGIYAAHGAVAVFALALLALFWTYRLGDNPSIRPGKTRPANPLANIGRFVAQPRLRLAWLIAFGRSCFWTTFFV YGPLFMVITGEGKLAGGLLVSAGNALLFMAIFWGKAGKRFGGRRTMTFAYFAMSAMLLAAGVVGETVPLLTGAFLLCGAF FTIALDALGSTAFMRSVRSYERAQMAAVYRTYLDFSELTPPLVYSVVLAFFGLGSVFVTLGLLAAVCGFVTWRYLPKSL
Sequences:
>Translated_399_residues MSTHVRHPIWLPALRAADARTFASLYAVESFARATVSSVIPIQAYEILHNEQIVSILYTIVALLGLSVTLFMPMLIRRFA RRWVYTAGACLLAIGSLFFVTHTLAGQLAGMLCRVMGASALSITLNLYIMDHIRKTDFMQAESLRMAWSMFAWTGGPTLG IFLYTRFGIYAAHGAVAVFALALLALFWTYRLGDNPSIRPGKTRPANPLANIGRFVAQPRLRLAWLIAFGRSCFWTTFFV YGPLFMVITGEGKLAGGLLVSAGNALLFMAIFWGKAGKRFGGRRTMTFAYFAMSAMLLAAGVVGETVPLLTGAFLLCGAF FTIALDALGSTAFMRSVRSYERAQMAAVYRTYLDFSELTPPLVYSVVLAFFGLGSVFVTLGLLAAVCGFVTWRYLPKSL >Mature_398_residues STHVRHPIWLPALRAADARTFASLYAVESFARATVSSVIPIQAYEILHNEQIVSILYTIVALLGLSVTLFMPMLIRRFAR RWVYTAGACLLAIGSLFFVTHTLAGQLAGMLCRVMGASALSITLNLYIMDHIRKTDFMQAESLRMAWSMFAWTGGPTLGI FLYTRFGIYAAHGAVAVFALALLALFWTYRLGDNPSIRPGKTRPANPLANIGRFVAQPRLRLAWLIAFGRSCFWTTFFVY GPLFMVITGEGKLAGGLLVSAGNALLFMAIFWGKAGKRFGGRRTMTFAYFAMSAMLLAAGVVGETVPLLTGAFLLCGAFF TIALDALGSTAFMRSVRSYERAQMAAVYRTYLDFSELTPPLVYSVVLAFFGLGSVFVTLGLLAAVCGFVTWRYLPKSL
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43784; Mature: 43652
Theoretical pI: Translated: 10.51; Mature: 10.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTHVRHPIWLPALRAADARTFASLYAVESFARATVSSVIPIQAYEILHNEQIVSILYTI CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH VALLGLSVTLFMPMLIRRFARRWVYTAGACLLAIGSLFFVTHTLAGQLAGMLCRVMGASA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH LSITLNLYIMDHIRKTDFMQAESLRMAWSMFAWTGGPTLGIFLYTRFGIYAAHGAVAVFA HHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH LALLALFWTYRLGDNPSIRPGKTRPANPLANIGRFVAQPRLRLAWLIAFGRSCFWTTFFV HHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHH YGPLFMVITGEGKLAGGLLVSAGNALLFMAIFWGKAGKRFGGRRTMTFAYFAMSAMLLAA HCCEEEEEECCCCCCCCEEEECCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH GVVGETVPLLTGAFLLCGAFFTIALDALGSTAFMRSVRSYERAQMAAVYRTYLDFSELTP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH PLVYSVVLAFFGLGSVFVTLGLLAAVCGFVTWRYLPKSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure STHVRHPIWLPALRAADARTFASLYAVESFARATVSSVIPIQAYEILHNEQIVSILYTI CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH VALLGLSVTLFMPMLIRRFARRWVYTAGACLLAIGSLFFVTHTLAGQLAGMLCRVMGASA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH LSITLNLYIMDHIRKTDFMQAESLRMAWSMFAWTGGPTLGIFLYTRFGIYAAHGAVAVFA HHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH LALLALFWTYRLGDNPSIRPGKTRPANPLANIGRFVAQPRLRLAWLIAFGRSCFWTTFFV HHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHH YGPLFMVITGEGKLAGGLLVSAGNALLFMAIFWGKAGKRFGGRRTMTFAYFAMSAMLLAA HCCEEEEEECCCCCCCCEEEECCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH GVVGETVPLLTGAFLLCGAFFTIALDALGSTAFMRSVRSYERAQMAAVYRTYLDFSELTP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH PLVYSVVLAFFGLGSVFVTLGLLAAVCGFVTWRYLPKSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA