| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is tauC [C]
Identifier: 13471349
GI number: 13471349
Start: 1091350
End: 1092198
Strand: Reverse
Name: tauC [C]
Synonym: mll1292
Alternate gene names: 13471349
Gene position: 1092198-1091350 (Counterclockwise)
Preceding gene: 13471350
Following gene: 161621451
Centisome position: 15.52
GC content: 63.72
Gene sequence:
>849_bases ATGACGGTCATTGACGGCACGTTGAAACTCGACCCCGAGGAAGCGCGCCGTGTGCGTCAGGAGCGGCTCGAGCGGGTCGG CCGCTGGGTGTTGCCGCTGGCGATCATGATCCTGGCGATCTGGCTGTGGGATCGCATCTGCGTGTGGGACGAGATCCCGC AATATATCCTGCCGCGCCCCGGCGTGGTGCTGCAGACGCTCTACAACGATGCCGGCCTGCTGTTCTCCTCGCTGCTGGTC ACCTTGCGCATCACCTTCCTCAGCCTGGCCTTGGCCGTCATCGGCGGCGTTGGCCTGTCGGTGCTGTTCGCGCAATCGAA ATGGGTGGAGATGTCGTTCTTCCCGTTCGCCATCGTGCTGCAGGTGACGCCGATCGTGGCGATCTTTCCGCTGATCAACA TCTATGTGAACAACCAGACAACCAAGCTTCTGCTGTGCGCCTGGATCGTCGCCTTCTTTCCGATCCTGTCCAACACCACG CTCGGCCTGAATTCGGTCGACCGCAATCTGCGCGACCTGTTCAAGCTCAACGGCGCGACGCGCTGGCAGCAGCTGCGCTA TCTCAGGCTGCCGGCGGCGATGCCGTATTTCCTCGGCGGGCTGAAGATCGCCGGCGGCCTGTCGCTGATCGGCGCCGTGG TGGCCGAGTTCGTCGCCGGGGCCACCGGCCAGTCGTCCGGGCTCGCCTCGCGCATTATCGAGGCCGGCTACCGCCTCAAC GCGCCGAGACTGTTCGCGGCGCTGTTCCTGATCTCGCTGACCGGCATCCTGATCTTCCTCGTGCTGTCGCTGATTTCGCA TCTTATTCTCAGGCGCTGGCACGAAAGCGCGCTGAAGCAGGAGCGGTAG
Upstream 100 bases:
>100_bases CGCGACGAGGCGTTTCGCACCTCGCCCGACTATGCAGCCCTTTGCCGCCAGGCTTCCGACGTGCTGGTCAATGCCATCAA TTCAACAGCGGGCCCGCATC
Downstream 100 bases:
>100_bases TGCCTTGATTCCGGACTCAGCTTCATACCGGCTCACCAACGCCCGCCTTCACGCCTCGCTGACGCCGGGGCTCACTGCGA CCTATGACGGCGATGGCTTT
Product: ATP-binding protein of ABC transporter
Products: taurine [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 282; Mature: 281
Protein sequence:
>282_residues MTVIDGTLKLDPEEARRVRQERLERVGRWVLPLAIMILAIWLWDRICVWDEIPQYILPRPGVVLQTLYNDAGLLFSSLLV TLRITFLSLALAVIGGVGLSVLFAQSKWVEMSFFPFAIVLQVTPIVAIFPLINIYVNNQTTKLLLCAWIVAFFPILSNTT LGLNSVDRNLRDLFKLNGATRWQQLRYLRLPAAMPYFLGGLKIAGGLSLIGAVVAEFVAGATGQSSGLASRIIEAGYRLN APRLFAALFLISLTGILIFLVLSLISHLILRRWHESALKQER
Sequences:
>Translated_282_residues MTVIDGTLKLDPEEARRVRQERLERVGRWVLPLAIMILAIWLWDRICVWDEIPQYILPRPGVVLQTLYNDAGLLFSSLLV TLRITFLSLALAVIGGVGLSVLFAQSKWVEMSFFPFAIVLQVTPIVAIFPLINIYVNNQTTKLLLCAWIVAFFPILSNTT LGLNSVDRNLRDLFKLNGATRWQQLRYLRLPAAMPYFLGGLKIAGGLSLIGAVVAEFVAGATGQSSGLASRIIEAGYRLN APRLFAALFLISLTGILIFLVLSLISHLILRRWHESALKQER >Mature_281_residues TVIDGTLKLDPEEARRVRQERLERVGRWVLPLAIMILAIWLWDRICVWDEIPQYILPRPGVVLQTLYNDAGLLFSSLLVT LRITFLSLALAVIGGVGLSVLFAQSKWVEMSFFPFAIVLQVTPIVAIFPLINIYVNNQTTKLLLCAWIVAFFPILSNTTL GLNSVDRNLRDLFKLNGATRWQQLRYLRLPAAMPYFLGGLKIAGGLSLIGAVVAEFVAGATGQSSGLASRIIEAGYRLNA PRLFAALFLISLTGILIFLVLSLISHLILRRWHESALKQER
Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0600
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 31513; Mature: 31382
Theoretical pI: Translated: 10.43; Mature: 10.43
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVIDGTLKLDPEEARRVRQERLERVGRWVLPLAIMILAIWLWDRICVWDEIPQYILPRP CCEECCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GVVLQTLYNDAGLLFSSLLVTLRITFLSLALAVIGGVGLSVLFAQSKWVEMSFFPFAIVL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHH QVTPIVAIFPLINIYVNNQTTKLLLCAWIVAFFPILSNTTLGLNSVDRNLRDLFKLNGAT HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCH RWQQLRYLRLPAAMPYFLGGLKIAGGLSLIGAVVAEFVAGATGQSSGLASRIIEAGYRLN HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCC APRLFAALFLISLTGILIFLVLSLISHLILRRWHESALKQER CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TVIDGTLKLDPEEARRVRQERLERVGRWVLPLAIMILAIWLWDRICVWDEIPQYILPRP CEECCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GVVLQTLYNDAGLLFSSLLVTLRITFLSLALAVIGGVGLSVLFAQSKWVEMSFFPFAIVL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHH QVTPIVAIFPLINIYVNNQTTKLLLCAWIVAFFPILSNTTLGLNSVDRNLRDLFKLNGAT HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCH RWQQLRYLRLPAAMPYFLGGLKIAGGLSLIGAVVAEFVAGATGQSSGLASRIIEAGYRLN HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCC APRLFAALFLISLTGILIFLVLSLISHLILRRWHESALKQER CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: taurine [Periplasm]; ATP; H2O [C]
Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]