| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13471279
Identifier: 13471279
GI number: 13471279
Start: 1011513
End: 1012169
Strand: Reverse
Name: 13471279
Synonym: mll1204
Alternate gene names: NA
Gene position: 1012169-1011513 (Counterclockwise)
Preceding gene: 13471280
Following gene: 13471276
Centisome position: 14.39
GC content: 63.32
Gene sequence:
>657_bases ATGGGGGACATCATGGCCGGACAACCGCTCAACCAGCCGGCTGAAATCCCGGCCGAGCTCGACCGCTGGAATTGGGGCGC CTTCTTCCTCAACTGGATCTGGGGCATCGGCAACAGCACTTTCATCGCGCTGCTGGCGCTGATCCCGGTCGTCAATCTCG TCATGATCTTCGTGCTCGGCGCACGCGGCAGCCGCTGGGCCTGGCAGAACCGGGCCTGGCGCGACGCGGAGCAGTTCCGC AAGACGCAGCGCAACTGGGCAATCGCCGGCCTTGCTGTCTGGGTGCTCAGTATCGGGGGCTGTGCAACGGCGGTCGGCAG CATCCCCTTCATGCTCAAAGGCAGCGACGCCTACCACATGACCATGGACGCCGTGCGTTCCGATACCCGCGTCAAGGCTG CCATTGGCGACGGCGTGACCGACAATTTCTGGATCGGCGGCCACCTCAACGTCAGTGCGAATGGCACGGGCGACGCCCAG TTCAGCATTCCCGTCCACGGCGCCAGGGGCAAAGCCACCGTGTTTTCCCATCTGGTCCGCAATGCCGGCACGTGGAGCAT GCGTCTTCTTGTGGTCAGGGTGGATGGAGTGGACACGCCGATCGTGCTGACCAACGAAGATCATGTGCCAATCCCGAACG CTGCGATCGGAATATAG
Upstream 100 bases:
>100_bases TTTTCGCCGGCTGTCGTCAAAGGCTTGAAATAGACCCTGCCGAACTTTGATTTTGCGCATTGTCGAGATCATGGTCTAGA ACCAATCGGTATGCGCACCG
Downstream 100 bases:
>100_bases ACATCGGCCCGGAGCGGGCGCGGCAGAAATGCAAAAACCGCGCTCCATCGGGAACGCGGCTTTGCCAGATACGCATGGCG TTTCGCTACGCAAACACTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 218; Mature: 217
Protein sequence:
>218_residues MGDIMAGQPLNQPAEIPAELDRWNWGAFFLNWIWGIGNSTFIALLALIPVVNLVMIFVLGARGSRWAWQNRAWRDAEQFR KTQRNWAIAGLAVWVLSIGGCATAVGSIPFMLKGSDAYHMTMDAVRSDTRVKAAIGDGVTDNFWIGGHLNVSANGTGDAQ FSIPVHGARGKATVFSHLVRNAGTWSMRLLVVRVDGVDTPIVLTNEDHVPIPNAAIGI
Sequences:
>Translated_218_residues MGDIMAGQPLNQPAEIPAELDRWNWGAFFLNWIWGIGNSTFIALLALIPVVNLVMIFVLGARGSRWAWQNRAWRDAEQFR KTQRNWAIAGLAVWVLSIGGCATAVGSIPFMLKGSDAYHMTMDAVRSDTRVKAAIGDGVTDNFWIGGHLNVSANGTGDAQ FSIPVHGARGKATVFSHLVRNAGTWSMRLLVVRVDGVDTPIVLTNEDHVPIPNAAIGI >Mature_217_residues GDIMAGQPLNQPAEIPAELDRWNWGAFFLNWIWGIGNSTFIALLALIPVVNLVMIFVLGARGSRWAWQNRAWRDAEQFRK TQRNWAIAGLAVWVLSIGGCATAVGSIPFMLKGSDAYHMTMDAVRSDTRVKAAIGDGVTDNFWIGGHLNVSANGTGDAQF SIPVHGARGKATVFSHLVRNAGTWSMRLLVVRVDGVDTPIVLTNEDHVPIPNAAIGI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23689; Mature: 23557
Theoretical pI: Translated: 8.55; Mature: 8.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDIMAGQPLNQPAEIPAELDRWNWGAFFLNWIWGIGNSTFIALLALIPVVNLVMIFVLG CCCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC ARGSRWAWQNRAWRDAEQFRKTQRNWAIAGLAVWVLSIGGCATAVGSIPFMLKGSDAYHM CCCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHCCHHHHHCCCCEEEECCCCEEE TMDAVRSDTRVKAAIGDGVTDNFWIGGHLNVSANGTGDAQFSIPVHGARGKATVFSHLVR EHHHHCCCCEEEEEECCCCCCCEEECCEEEEECCCCCCEEEEEEECCCCCHHHHHHHHHH NAGTWSMRLLVVRVDGVDTPIVLTNEDHVPIPNAAIGI CCCCEEEEEEEEEECCCCCCEEEECCCCCCCCCHHCCC >Mature Secondary Structure GDIMAGQPLNQPAEIPAELDRWNWGAFFLNWIWGIGNSTFIALLALIPVVNLVMIFVLG CCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC ARGSRWAWQNRAWRDAEQFRKTQRNWAIAGLAVWVLSIGGCATAVGSIPFMLKGSDAYHM CCCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHCCHHHHHCCCCEEEECCCCEEE TMDAVRSDTRVKAAIGDGVTDNFWIGGHLNVSANGTGDAQFSIPVHGARGKATVFSHLVR EHHHHCCCCEEEEEECCCCCCCEEECCEEEEECCCCCCEEEEEEECCCCCHHHHHHHHHH NAGTWSMRLLVVRVDGVDTPIVLTNEDHVPIPNAAIGI CCCCEEEEEEEEEECCCCCCEEEECCCCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA