| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13471214
Identifier: 13471214
GI number: 13471214
Start: 941037
End: 941534
Strand: Direct
Name: 13471214
Synonym: mlr1124
Alternate gene names: NA
Gene position: 941037-941534 (Clockwise)
Preceding gene: 13471213
Following gene: 13471219
Centisome position: 13.37
GC content: 65.86
Gene sequence:
>498_bases ATGCCTAGCAACGTCTTCCGCTTCGACGAAAGCTGGGACATTCCCGAAGGCACGCCGCAGCAAGTGTGGGACGTTCTCTC CGACGCCGAACTGCTGCCGCTCTGGTGGGGCGAGGTCTACAAGGAAGTGGTGCCGCTCGATGGCAAGGGCAAGGCGTCCG TCGGCTCGCGGGCAAGGGCACGGGCGCGGGGCGCCCTGCCCTATGAACTGAACTTCATCATCGAGGCCGCCGAACTCGAG CCTGGCCGGCTGGTCGTCGTGAAAACCTTTGGCGACTTCGACGGGCTGTGGCGGGCCGAACTGTCGCCGTCGGGCAGCGG GACCCATGTCCAACTGACCTGGCAGGTCACGGTCGAGAGGCCGATCCTCAAATTCCTGGCACCTCTGCTGCGGCCGGCCT TCGCCTGGAATCATCGCTGGACAACGCCGCGCGGCGAAGCCGGTCTGCGGCGCTACCTCAGGCTCGCAACAACAGTGCCT CGGCGCGATGAGGCCTAA
Upstream 100 bases:
>100_bases GAAAGTGGTGCGTTATTACGTCAAGCAGATCGTCGCCTGATGCTAGCCTCATAAAGAAGACACCTCTAATATACGCGTTC CACCAAATGGAGGAACCGCG
Downstream 100 bases:
>100_bases TCACCAATTGCGGTTCAACCATTCACGCGCCGGCCGCTCGACGAGGTAGTAGCTGCAGAGCGCGCAGGCAAAGACCCCGA CCAGCATCGGCCATGGGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 165; Mature: 164
Protein sequence:
>165_residues MPSNVFRFDESWDIPEGTPQQVWDVLSDAELLPLWWGEVYKEVVPLDGKGKASVGSRARARARGALPYELNFIIEAAELE PGRLVVVKTFGDFDGLWRAELSPSGSGTHVQLTWQVTVERPILKFLAPLLRPAFAWNHRWTTPRGEAGLRRYLRLATTVP RRDEA
Sequences:
>Translated_165_residues MPSNVFRFDESWDIPEGTPQQVWDVLSDAELLPLWWGEVYKEVVPLDGKGKASVGSRARARARGALPYELNFIIEAAELE PGRLVVVKTFGDFDGLWRAELSPSGSGTHVQLTWQVTVERPILKFLAPLLRPAFAWNHRWTTPRGEAGLRRYLRLATTVP RRDEA >Mature_164_residues PSNVFRFDESWDIPEGTPQQVWDVLSDAELLPLWWGEVYKEVVPLDGKGKASVGSRARARARGALPYELNFIIEAAELEP GRLVVVKTFGDFDGLWRAELSPSGSGTHVQLTWQVTVERPILKFLAPLLRPAFAWNHRWTTPRGEAGLRRYLRLATTVPR RDEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18694; Mature: 18563
Theoretical pI: Translated: 7.70; Mature: 7.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSNVFRFDESWDIPEGTPQQVWDVLSDAELLPLWWGEVYKEVVPLDGKGKASVGSRARA CCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHH RARGALPYELNFIIEAAELEPGRLVVVKTFGDFDGLWRAELSPSGSGTHVQLTWQVTVER HHCCCCCEEEEEEEEECCCCCCCEEEEEECCCCCCEEEEECCCCCCCCEEEEEEEEEECH PILKFLAPLLRPAFAWNHRWTTPRGEAGLRRYLRLATTVPRRDEA HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure PSNVFRFDESWDIPEGTPQQVWDVLSDAELLPLWWGEVYKEVVPLDGKGKASVGSRARA CCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHH RARGALPYELNFIIEAAELEPGRLVVVKTFGDFDGLWRAELSPSGSGTHVQLTWQVTVER HHCCCCCEEEEEEEEECCCCCCCEEEEEECCCCCCEEEEECCCCCCCCEEEEEEEEEECH PILKFLAPLLRPAFAWNHRWTTPRGEAGLRRYLRLATTVPRRDEA HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA