Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

Click here to switch to the map view.

The map label for this gene is 13471207

Identifier: 13471207

GI number: 13471207

Start: 934928

End: 936736

Strand: Reverse

Name: 13471207

Synonym: mll1116

Alternate gene names: NA

Gene position: 936736-934928 (Counterclockwise)

Preceding gene: 13471208

Following gene: 13471203

Centisome position: 13.31

GC content: 54.06

Gene sequence:

>1809_bases
ATGTTTGCAGTCATACGCGCTCATTTTACAGCCACTCCAGTGAGCGACGTCTGGTCCGACGCCGAAATGCGGAACTGGCT
TGACCCTACAATACCTTACAGCGTCGCCCACTATTGGTCCCAAACATCTTTCTCGCAAATCGATTTAAGTTATCAACTGT
TGCCGATACTTCAGCTTGCTGACCCACGCAATGACCCGAATTTCGGCATGACGGCCCGGCAAAGGCTTGTGAATGCTGTC
CTCGCCGGGGCCACTAACGAGTGGGACCCAGATTGGTCCACTTTCGCCCACGTCGTTATCTGGTTTCCTGCCGCGATAGA
TCTTCACGGTGGCGGCAGCTATAGCGTCAAACGCAAGGACGGCACCGGCGAACGAAGCATCGTCGTTGCGGTCGTCAACA
AGGGGGCGCGGTTCGACACGATCTGTCAGGAGTTTGGACACAATTTCGGATTTCAGCATGAACGAAATCAAGCGGGAGGC
GAATACGGCAGTCCCTATTCCACGATGAGTTCCTCTGTATTCCCCGACAACGCCTTCGAGCGCCCTGCCTCTCCACAGCT
TCCGGCAGGTCTTGCGCCTTTCGACGGCAGCCCTCCGCCTACGACGGATGTCATGCGTATAGCCGGTCCGTATGTTACTC
CATTGCAGTTCTTCGTGAATCGGACCGGAGACTTCGTGCATGCCGATTCGGTTGAAGAGCTCCCGGCCACATTCCAAGAT
GCCCATATCAATGTATACCTCCGAGCGCTCGATGTAGGAGTAACGTCTTGGCCAACACGCCGTAAGGTCTTGGCAGTCGT
TCCGCCCGCATACGGGGACGCAAATGGATATGGAATCGAAATTCGCAGACCGCGCGAGTACGACCAAGGTCTCAACGAGA
CTCCAGCACCCGGTATTTCAGGTGTCGCAGGCGCCGTGATTCATTCTTTTGATCCTTCCACCAAACTCATTACCTATGTT
GGTTGCATACCGTTTGCTGGCCTTGAAGGTGATCGAGACTATCGGATCGGAAATTTGGTCATCCGACTCAACAATTTCAA
CGACGACTCCGATTTTGTAGGCGTTACTGTTGGTGGGACCAAATTGGGCGAAGCCGCGATTCAGTTCGCACCGGCGCAGA
TGTCGTCAACCGTTACCTACACGACAGATTGGGAGTGGGTGTATGCAACTCCGTGCAGAATGTTTCCTGAAAACTCATAC
GCCCAGCGCAGCCACCTAAAATCCACCAAAGTCGTCCTGGCTGCTCTCTCTCAGGGGTATGAAGCGCCGGGATACGTTTG
GACAATTAATGACGTGGCAGTTGACCCTGAGCAGATCAGTATGGAAGTTTCGGTCAATGTGCGGTCCGGCGATCCAGGTC
TAGGCAGGCAGTTTCGAAGTGAAAGCATCACCGTAAAGTATCGAATTATAGATAACCGCCTGGAGTTCGAATCCGATGCG
CCGTATTCGGAGTTCAGCCTGAGTGTGTCTGCAACGGTGAGCGAAACGCTAACCGCCGCTGCCGCGTCCACGCCCGCTCG
CTCCGTATCAACAGACGTTACATTCCAGAACGCAGAGATTGAATGGTCGCTGTCATACCTCGAAAAAATGGTGCAGTGCT
GGCGCGAGCACATCTACCAGTGGACCCCCGAGGACATGTTCGGCATTCCCACGGGCAACGGTGCCGTTGCCGTCAAAATA
CGCCAGTTCAAACAGCTCCACGACCACCTACTGGGGACGAATCCTGAACTCGCGGAAACTCTCACGAGAGAAGTCCTAAA
ACTGGGAAATATTACTAGGGATGATCTTTTTGCCCAGCCTGGCCCCTAA

Upstream 100 bases:

>100_bases
GCTTGCAAATCACGTCACTTTACACAAAACTTGACCATCGAGGCCAGTCATCCTGTGGATGTCGGTTTAGTTAATTCAAA
ATGAATGAGGAGGGTAGGCG

Downstream 100 bases:

>100_bases
GAGTCCGACTCGAAACTCATGTATGGCGTGCCAGGCGCCGGATGAGGAGCATGGTTGAGGCGGCGTAGAGGAAGGCTTCG
GCGGAGGCGATGATGCCTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 602; Mature: 602

Protein sequence:

>602_residues
MFAVIRAHFTATPVSDVWSDAEMRNWLDPTIPYSVAHYWSQTSFSQIDLSYQLLPILQLADPRNDPNFGMTARQRLVNAV
LAGATNEWDPDWSTFAHVVIWFPAAIDLHGGGSYSVKRKDGTGERSIVVAVVNKGARFDTICQEFGHNFGFQHERNQAGG
EYGSPYSTMSSSVFPDNAFERPASPQLPAGLAPFDGSPPPTTDVMRIAGPYVTPLQFFVNRTGDFVHADSVEELPATFQD
AHINVYLRALDVGVTSWPTRRKVLAVVPPAYGDANGYGIEIRRPREYDQGLNETPAPGISGVAGAVIHSFDPSTKLITYV
GCIPFAGLEGDRDYRIGNLVIRLNNFNDDSDFVGVTVGGTKLGEAAIQFAPAQMSSTVTYTTDWEWVYATPCRMFPENSY
AQRSHLKSTKVVLAALSQGYEAPGYVWTINDVAVDPEQISMEVSVNVRSGDPGLGRQFRSESITVKYRIIDNRLEFESDA
PYSEFSLSVSATVSETLTAAAASTPARSVSTDVTFQNAEIEWSLSYLEKMVQCWREHIYQWTPEDMFGIPTGNGAVAVKI
RQFKQLHDHLLGTNPELAETLTREVLKLGNITRDDLFAQPGP

Sequences:

>Translated_602_residues
MFAVIRAHFTATPVSDVWSDAEMRNWLDPTIPYSVAHYWSQTSFSQIDLSYQLLPILQLADPRNDPNFGMTARQRLVNAV
LAGATNEWDPDWSTFAHVVIWFPAAIDLHGGGSYSVKRKDGTGERSIVVAVVNKGARFDTICQEFGHNFGFQHERNQAGG
EYGSPYSTMSSSVFPDNAFERPASPQLPAGLAPFDGSPPPTTDVMRIAGPYVTPLQFFVNRTGDFVHADSVEELPATFQD
AHINVYLRALDVGVTSWPTRRKVLAVVPPAYGDANGYGIEIRRPREYDQGLNETPAPGISGVAGAVIHSFDPSTKLITYV
GCIPFAGLEGDRDYRIGNLVIRLNNFNDDSDFVGVTVGGTKLGEAAIQFAPAQMSSTVTYTTDWEWVYATPCRMFPENSY
AQRSHLKSTKVVLAALSQGYEAPGYVWTINDVAVDPEQISMEVSVNVRSGDPGLGRQFRSESITVKYRIIDNRLEFESDA
PYSEFSLSVSATVSETLTAAAASTPARSVSTDVTFQNAEIEWSLSYLEKMVQCWREHIYQWTPEDMFGIPTGNGAVAVKI
RQFKQLHDHLLGTNPELAETLTREVLKLGNITRDDLFAQPGP
>Mature_602_residues
MFAVIRAHFTATPVSDVWSDAEMRNWLDPTIPYSVAHYWSQTSFSQIDLSYQLLPILQLADPRNDPNFGMTARQRLVNAV
LAGATNEWDPDWSTFAHVVIWFPAAIDLHGGGSYSVKRKDGTGERSIVVAVVNKGARFDTICQEFGHNFGFQHERNQAGG
EYGSPYSTMSSSVFPDNAFERPASPQLPAGLAPFDGSPPPTTDVMRIAGPYVTPLQFFVNRTGDFVHADSVEELPATFQD
AHINVYLRALDVGVTSWPTRRKVLAVVPPAYGDANGYGIEIRRPREYDQGLNETPAPGISGVAGAVIHSFDPSTKLITYV
GCIPFAGLEGDRDYRIGNLVIRLNNFNDDSDFVGVTVGGTKLGEAAIQFAPAQMSSTVTYTTDWEWVYATPCRMFPENSY
AQRSHLKSTKVVLAALSQGYEAPGYVWTINDVAVDPEQISMEVSVNVRSGDPGLGRQFRSESITVKYRIIDNRLEFESDA
PYSEFSLSVSATVSETLTAAAASTPARSVSTDVTFQNAEIEWSLSYLEKMVQCWREHIYQWTPEDMFGIPTGNGAVAVKI
RQFKQLHDHLLGTNPELAETLTREVLKLGNITRDDLFAQPGP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 66423; Mature: 66423

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFAVIRAHFTATPVSDVWSDAEMRNWLDPTIPYSVAHYWSQTSFSQIDLSYQLLPILQLA
CEEEEEEEECCCCHHHHHCCHHHHHCCCCCCCHHHHHHHCCCCCEEECCEEEEEEHHHHC
DPRNDPNFGMTARQRLVNAVLAGATNEWDPDWSTFAHVVIWFPAAIDLHGGGSYSVKRKD
CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHEEEEEEEEEEEEECCCCCEEEEECC
GTGERSIVVAVVNKGARFDTICQEFGHNFGFQHERNQAGGEYGSPYSTMSSSVFPDNAFE
CCCCCEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCC
RPASPQLPAGLAPFDGSPPPTTDVMRIAGPYVTPLQFFVNRTGDFVHADSVEELPATFQD
CCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHCCCCEEECCCHHHHCCCCCC
AHINVYLRALDVGVTSWPTRRKVLAVVPPAYGDANGYGIEIRRPREYDQGLNETPAPGIS
CEEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCEEEEEECCHHHHCCCCCCCCCCCC
GVAGAVIHSFDPSTKLITYVGCIPFAGLEGDRDYRIGNLVIRLNNFNDDSDFVGVTVGGT
HHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEEEEEEECCCCCCCEEEEEECCC
KLGEAAIQFAPAQMSSTVTYTTDWEWVYATPCRMFPENSYAQRSHLKSTKVVLAALSQGY
HHCCHHHEECCCHHCCEEEEEECCCEEEECCCEECCCCCHHHHHHHHHHHHHHHHHHCCC
EAPGYVWTINDVAVDPEQISMEVSVNVRSGDPGLGRQFRSESITVKYRIIDNRLEFESDA
CCCCEEEEECCEEECHHHEEEEEEEEEECCCCCCCHHHCCCCEEEEEEEECCEECCCCCC
PYSEFSLSVSATVSETLTAAAASTPARSVSTDVTFQNAEIEWSLSYLEKMVQCWREHIYQ
CCCCEEEEEEEHHHHHHHHHHCCCCCCCCCCCEEEECCEEEEEHHHHHHHHHHHHHHHCC
WTPEDMFGIPTGNGAVAVKIRQFKQLHDHLLGTNPELAETLTREVLKLGNITRDDLFAQP
CCCCHHCCCCCCCCEEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHCCCCC
GP
CC
>Mature Secondary Structure
MFAVIRAHFTATPVSDVWSDAEMRNWLDPTIPYSVAHYWSQTSFSQIDLSYQLLPILQLA
CEEEEEEEECCCCHHHHHCCHHHHHCCCCCCCHHHHHHHCCCCCEEECCEEEEEEHHHHC
DPRNDPNFGMTARQRLVNAVLAGATNEWDPDWSTFAHVVIWFPAAIDLHGGGSYSVKRKD
CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHEEEEEEEEEEEEECCCCCEEEEECC
GTGERSIVVAVVNKGARFDTICQEFGHNFGFQHERNQAGGEYGSPYSTMSSSVFPDNAFE
CCCCCEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCC
RPASPQLPAGLAPFDGSPPPTTDVMRIAGPYVTPLQFFVNRTGDFVHADSVEELPATFQD
CCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHCCCCEEECCCHHHHCCCCCC
AHINVYLRALDVGVTSWPTRRKVLAVVPPAYGDANGYGIEIRRPREYDQGLNETPAPGIS
CEEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCEEEEEECCHHHHCCCCCCCCCCCC
GVAGAVIHSFDPSTKLITYVGCIPFAGLEGDRDYRIGNLVIRLNNFNDDSDFVGVTVGGT
HHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEEEEEEECCCCCCCEEEEEECCC
KLGEAAIQFAPAQMSSTVTYTTDWEWVYATPCRMFPENSYAQRSHLKSTKVVLAALSQGY
HHCCHHHEECCCHHCCEEEEEECCCEEEECCCEECCCCCHHHHHHHHHHHHHHHHHHCCC
EAPGYVWTINDVAVDPEQISMEVSVNVRSGDPGLGRQFRSESITVKYRIIDNRLEFESDA
CCCCEEEEECCEEECHHHEEEEEEEEEECCCCCCCHHHCCCCEEEEEEEECCEECCCCCC
PYSEFSLSVSATVSETLTAAAASTPARSVSTDVTFQNAEIEWSLSYLEKMVQCWREHIYQ
CCCCEEEEEEEHHHHHHHHHHCCCCCCCCCCCEEEECCEEEEEHHHHHHHHHHHHHHHCC
WTPEDMFGIPTGNGAVAVKIRQFKQLHDHLLGTNPELAETLTREVLKLGNITRDDLFAQP
CCCCHHCCCCCCCCEEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHCCCCC
GP
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA