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The map label for this gene is scpA [H]

Identifier: 13471185

GI number: 13471185

Start: 908775

End: 909632

Strand: Reverse

Name: scpA [H]

Synonym: mll1088

Alternate gene names: 13471185

Gene position: 909632-908775 (Counterclockwise)

Preceding gene: 13471186

Following gene: 13471184

Centisome position: 12.93

GC content: 64.92

Gene sequence:

>858_bases
GTGACAAAGGCAGTGGCGGAAACATTGGAAAGCAAGGCCGCGAAGGCCGCACCGATGGACCGCCTGTGGGCCGAGAACGA
CGATTCACGCGTCACCGGCGATCCGTCGCTGGTCGTCGACGTGGCCGGCTTCGAAGGCCCGCTCGATCTACTCCTGCACC
TTGCCCGCACCCAGAAGGTCGATCTGGCGCGCATCTCGATCCTGGCGCTGGTCGAGCAGTATCTGGCCTTTGTCGAGACA
GCGAGGGCGCTGCGGCTCGAACTTGCGGCCGACTATCTGGTGATGGCGGCATGGCTCGCCTTCCTCAAGTCGAAGCTGTT
GATCCCCAAGCAGCCGGGCGAAGAGGGCGAAAGCGGCGAGGAACTGGCGGCCGTGCTGCAATTCCGGCTGAAGCGGCTGG
AAGCGATGCGTGATGCGGCGGCGCGTCTGGTCAACCGCAACAGGCTCGGGCGCGACGTGTTCGCGCGCGGCATGCCCGAA
ATGGTCATCATCGAGAAGCGCAACGCCTATTCGGCGTCGCTCTACGATCTGCTGACCGCCTATGCCCAGCAGCGGCAGAA
GCAGGCGGTCACCAATGTGACGATCGCCAGGCGGGGTGTGTGGTCGCTCAAGGATGCGCGCGACATCCTGACCCGGCTGA
TCGGCTCGCTGCGCGACTGGACGGCGCTGGACAGCTTCCTCATCCGATACATGACCAGCCCGGAAGAGCGGCGCACGGCG
ATCGCCAGCTCGTTCGCGGCGACACTGGAACTGGTGCGCGAGCGCAAGATGGATCTGCGCCAGGACGAGGTGTTCGCGCC
GATCTATCTGCGCGATCACCGCGCACCGGCAATCAAGGCAGTCGAGGTGGCATCATGA

Upstream 100 bases:

>100_bases
GCGGGCGCTGACCTATATAAGGAAACGCGACGCGGCCGAGGAAACCGAGATACGCGCCGAATTTGCCACCTATTTCGATG
CGGTGGCCTAACCCAAGGAA

Downstream 100 bases:

>100_bases
GCGAACGCGCCAACGCTTCGGTTATCCCCTTCAAGGTGGACGATGAACTGGAAGGCGATCTCGACCAGACTTCGGCCGAG
AATCCGGTGCAGAACCCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 284

Protein sequence:

>285_residues
MTKAVAETLESKAAKAAPMDRLWAENDDSRVTGDPSLVVDVAGFEGPLDLLLHLARTQKVDLARISILALVEQYLAFVET
ARALRLELAADYLVMAAWLAFLKSKLLIPKQPGEEGESGEELAAVLQFRLKRLEAMRDAAARLVNRNRLGRDVFARGMPE
MVIIEKRNAYSASLYDLLTAYAQQRQKQAVTNVTIARRGVWSLKDARDILTRLIGSLRDWTALDSFLIRYMTSPEERRTA
IASSFAATLELVRERKMDLRQDEVFAPIYLRDHRAPAIKAVEVAS

Sequences:

>Translated_285_residues
MTKAVAETLESKAAKAAPMDRLWAENDDSRVTGDPSLVVDVAGFEGPLDLLLHLARTQKVDLARISILALVEQYLAFVET
ARALRLELAADYLVMAAWLAFLKSKLLIPKQPGEEGESGEELAAVLQFRLKRLEAMRDAAARLVNRNRLGRDVFARGMPE
MVIIEKRNAYSASLYDLLTAYAQQRQKQAVTNVTIARRGVWSLKDARDILTRLIGSLRDWTALDSFLIRYMTSPEERRTA
IASSFAATLELVRERKMDLRQDEVFAPIYLRDHRAPAIKAVEVAS
>Mature_284_residues
TKAVAETLESKAAKAAPMDRLWAENDDSRVTGDPSLVVDVAGFEGPLDLLLHLARTQKVDLARISILALVEQYLAFVETA
RALRLELAADYLVMAAWLAFLKSKLLIPKQPGEEGESGEELAAVLQFRLKRLEAMRDAAARLVNRNRLGRDVFARGMPEM
VIIEKRNAYSASLYDLLTAYAQQRQKQAVTNVTIARRGVWSLKDARDILTRLIGSLRDWTALDSFLIRYMTSPEERRTAI
ASSFAATLELVRERKMDLRQDEVFAPIYLRDHRAPAIKAVEVAS

Specific function: Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing smc and scpB that pull DNA away from mid-cell into both cell halves [H]

COG id: COG1354

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm. Note=Associated with two foci at the outer edges of the nucleoid region in young cells, and at four foci within both cell halves in older cells (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003768 [H]

Pfam domain/function: PF02616 ScpA_ScpB [H]

EC number: NA

Molecular weight: Translated: 31984; Mature: 31853

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKAVAETLESKAAKAAPMDRLWAENDDSRVTGDPSLVVDVAGFEGPLDLLLHLARTQKV
CCHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCH
DLARISILALVEQYLAFVETARALRLELAADYLVMAAWLAFLKSKLLIPKQPGEEGESGE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHH
ELAAVLQFRLKRLEAMRDAAARLVNRNRLGRDVFARGMPEMVIIEKRNAYSASLYDLLTA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCEEEEECCCCHHHHHHHHHHH
YAQQRQKQAVTNVTIARRGVWSLKDARDILTRLIGSLRDWTALDSFLIRYMTSPEERRTA
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
IASSFAATLELVRERKMDLRQDEVFAPIYLRDHRAPAIKAVEVAS
HHHHHHHHHHHHHHHHHCCCHHHCCCCEEEECCCCCCHHHEECCC
>Mature Secondary Structure 
TKAVAETLESKAAKAAPMDRLWAENDDSRVTGDPSLVVDVAGFEGPLDLLLHLARTQKV
CHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCH
DLARISILALVEQYLAFVETARALRLELAADYLVMAAWLAFLKSKLLIPKQPGEEGESGE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHH
ELAAVLQFRLKRLEAMRDAAARLVNRNRLGRDVFARGMPEMVIIEKRNAYSASLYDLLTA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCEEEEECCCCHHHHHHHHHHH
YAQQRQKQAVTNVTIARRGVWSLKDARDILTRLIGSLRDWTALDSFLIRYMTSPEERRTA
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
IASSFAATLELVRERKMDLRQDEVFAPIYLRDHRAPAIKAVEVAS
HHHHHHHHHHHHHHHHHCCCHHHCCCCEEEECCCCCCHHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12704232 [H]