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The map label for this gene is ugpA [C]

Identifier: 13470889

GI number: 13470889

Start: 557595

End: 558461

Strand: Reverse

Name: ugpA [C]

Synonym: mll0705

Alternate gene names: 13470889

Gene position: 558461-557595 (Counterclockwise)

Preceding gene: 13470890

Following gene: 13470888

Centisome position: 7.94

GC content: 60.09

Gene sequence:

>867_bases
ATGGACAAGACCTGGAACAACAAGGCCTGGTTCCTGGTGCTGCCGGTGCTGGTGCTGGTGGCCTTCACCGCCGTCATCCC
GCTGATGACGGTCGTCAACTATTCGGTGCAGGACACGTTCGGCAACAATGTCTTCACCTGGGCCGGCACCGAATGGTTCG
AGGACCTGCTGTCGTCCAGCCGCTTCTGGGAAGCGATGGTCCGCAACCTGATCTTTTCCTTCATCATCCTGGCGATCCAG
GTGCCGCTCGGCATCTTCATCGCGCTCAACATGCCAAAGAAGGGCTGGGGCGTGCCGGTCTGCCTGGTGCTGATGTCACT
GCCACTGCTGATCCCGTGGAACGTCGTCGGCACCATCTGGCAGGTGTTCGGACGCAACGACATCGGGCTGCTGGGCTACT
ACGTCAACGCGCTCGGCATCGACTTCAACTACGTTCAGCATGCGTTCGATGCCTGGGTCATCATCATCGTCATGGATGTG
TGGCACTGGACCAGCCTCGTCGTGCTGCTCTGCTATGCTGGCCTGGTTTCCATTCCCGATGCCTTCTACCAGGCGGCCAA
GATCGACGGAGCCTCGCGCTGGGCGGTGTTTCGCTACATCCAGCTGCCGAAGATGCAGCGCGTGCTTTTGATCGCCGTGC
TGCTGCGCTTCATGGACAGTTTTATGATCTACACCGAACCCTTCGTCGTCACCGGCGGCGGGCCGGGCAACTCGACGACC
TTCCTGTCGATCGACCTCGTCAAGACGGCGCTCGGCCAGTTCGACCTTGGCCCGGCTGCCGCCATGTCGCTGGTCTACTT
CCTCATCATCCTGTTGTTGTCATGGGTGTTCTACACTGTGATGACCAACTACGACGCGGAGCGCTGA

Upstream 100 bases:

>100_bases
CGGCGAGGACGAGACTGTTCCAGCCGAGCCGAAGGTGCGGTTCGATCCGGCCGGCATCAACATCTATGCCGATTCCTGGC
GTGTCGAGATGGGGGCCTAG

Downstream 100 bases:

>100_bases
AATGGCTGGCGCCAATGAACGAACCGAGCGCAATGCGATAAACGGGACCGCCTCGGAAGGTCTCGCCAGTGCGCTGTCGC
AGAGCGATCTCGACAGGCGG

Product: permease protein of sugar ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MDKTWNNKAWFLVLPVLVLVAFTAVIPLMTVVNYSVQDTFGNNVFTWAGTEWFEDLLSSSRFWEAMVRNLIFSFIILAIQ
VPLGIFIALNMPKKGWGVPVCLVLMSLPLLIPWNVVGTIWQVFGRNDIGLLGYYVNALGIDFNYVQHAFDAWVIIIVMDV
WHWTSLVVLLCYAGLVSIPDAFYQAAKIDGASRWAVFRYIQLPKMQRVLLIAVLLRFMDSFMIYTEPFVVTGGGPGNSTT
FLSIDLVKTALGQFDLGPAAAMSLVYFLIILLLSWVFYTVMTNYDAER

Sequences:

>Translated_288_residues
MDKTWNNKAWFLVLPVLVLVAFTAVIPLMTVVNYSVQDTFGNNVFTWAGTEWFEDLLSSSRFWEAMVRNLIFSFIILAIQ
VPLGIFIALNMPKKGWGVPVCLVLMSLPLLIPWNVVGTIWQVFGRNDIGLLGYYVNALGIDFNYVQHAFDAWVIIIVMDV
WHWTSLVVLLCYAGLVSIPDAFYQAAKIDGASRWAVFRYIQLPKMQRVLLIAVLLRFMDSFMIYTEPFVVTGGGPGNSTT
FLSIDLVKTALGQFDLGPAAAMSLVYFLIILLLSWVFYTVMTNYDAER
>Mature_288_residues
MDKTWNNKAWFLVLPVLVLVAFTAVIPLMTVVNYSVQDTFGNNVFTWAGTEWFEDLLSSSRFWEAMVRNLIFSFIILAIQ
VPLGIFIALNMPKKGWGVPVCLVLMSLPLLIPWNVVGTIWQVFGRNDIGLLGYYVNALGIDFNYVQHAFDAWVIIIVMDV
WHWTSLVVLLCYAGLVSIPDAFYQAAKIDGASRWAVFRYIQLPKMQRVLLIAVLLRFMDSFMIYTEPFVVTGGGPGNSTT
FLSIDLVKTALGQFDLGPAAAMSLVYFLIILLLSWVFYTVMTNYDAER

Specific function: Probably part of the binding-protein-dependent transport system y4oPQRS. This system probably transports a sugar-like molecule. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=271, Percent_Identity=26.5682656826568, Blast_Score=76, Evalue=3e-15,
Organism=Escherichia coli, GI1787570, Length=233, Percent_Identity=26.1802575107296, Blast_Score=73, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32584; Mature: 32584

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKTWNNKAWFLVLPVLVLVAFTAVIPLMTVVNYSVQDTFGNNVFTWAGTEWFEDLLSSS
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCEEEECCHHHHHHHHCCH
RFWEAMVRNLIFSFIILAIQVPLGIFIALNMPKKGWGVPVCLVLMSLPLLIPWNVVGTIW
HHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHHHHHHHHHHCCHHHHHHHH
QVFGRNDIGLLGYYVNALGIDFNYVQHAFDAWVIIIVMDVWHWTSLVVLLCYAGLVSIPD
HHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
AFYQAAKIDGASRWAVFRYIQLPKMQRVLLIAVLLRFMDSFMIYTEPFVVTGGGPGNSTT
HHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEECCEEEECCCCCCCCE
FLSIDLVKTALGQFDLGPAAAMSLVYFLIILLLSWVFYTVMTNYDAER
EEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MDKTWNNKAWFLVLPVLVLVAFTAVIPLMTVVNYSVQDTFGNNVFTWAGTEWFEDLLSSS
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCEEEECCHHHHHHHHCCH
RFWEAMVRNLIFSFIILAIQVPLGIFIALNMPKKGWGVPVCLVLMSLPLLIPWNVVGTIW
HHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHHHHHHHHHHCCHHHHHHHH
QVFGRNDIGLLGYYVNALGIDFNYVQHAFDAWVIIIVMDVWHWTSLVVLLCYAGLVSIPD
HHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
AFYQAAKIDGASRWAVFRYIQLPKMQRVLLIAVLLRFMDSFMIYTEPFVVTGGGPGNSTT
HHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEECCEEEECCCCCCCCE
FLSIDLVKTALGQFDLGPAAAMSLVYFLIILLLSWVFYTVMTNYDAER
EEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]