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The map label for this gene is 13470766

Identifier: 13470766

GI number: 13470766

Start: 409766

End: 410440

Strand: Reverse

Name: 13470766

Synonym: mll0558

Alternate gene names: NA

Gene position: 410440-409766 (Counterclockwise)

Preceding gene: 13470767

Following gene: 13470765

Centisome position: 5.83

GC content: 65.04

Gene sequence:

>675_bases
ATGCACCAACGTGCTGCGCTGGCATCAGGCGATCTCCAGCCGGCCGAGTGCGGCCGCTTGAGCGTGGAACTGGACAGCCT
CGCGGCAACGGTCAGGGCCTGCCGTATCTGCGTTGAAAATCCCGTCGGCAAGCCGCTGCCGCATGAGCCGAGGCCGGTGC
TGCGGCCCTCGTCCAGCGCCCGCATCCTGATTGCCAGCCAGGCGCCGGGAACCAAGGTGCACCTGTCGGGCATGCCGTTC
ACCGATGCCTCGGGCGACCGCCTGCGCAGTTGGCTCGGCGTGACCAGCGACGAATTCTACGACATCGAGAAATTCGCCAT
CGTGCCGATGGGCTTCTGCTTTCCCGGCCAGGATGCCAAGGGTGGTGACCTGCCGCCAAGGCGCGAATGCGCGCCAGCCT
GGCGTGCGCCTTTGATGGCGCTGATGCCGCGGATCGACCTGGTGCTGACGATTGGCATCTACGCGCAGTCCTGGCATATG
GCCGCCGCGCGCCGGCCCTCGCTGACGGAAACGGTGATGGACTGGCGCGCCATCTGGGAGAATTCCGTCGGCGCAAAAGT
GCTGCCGCTGCCACATCCATCCTGGCGCAACAGCGGCTGGTTGAAGCAGAATCCGTGGTTTGAAATGGATTTGCTGCCTT
TCCTGCGCTCGGAAATCCGCTATCGCCTCGGTTAG

Upstream 100 bases:

>100_bases
ACCGGGAATTCGCCGCCGGCGACAGCTATTCGATTGCGGATATCACCGGCCTGATCGCGATCGACTTCATGAAGCCGGCG
CGCATCAAGGTGCCGGAGGA

Downstream 100 bases:

>100_bases
ACATTCAGCAAGAAATCACTCGCTTTCATGGCGATTGGCAGAATTTCTTTCTTGTGAAAGCCCCGAATAAAGGGGAATAT
AGCCAAACTATTCCTCAGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MHQRAALASGDLQPAECGRLSVELDSLAATVRACRICVENPVGKPLPHEPRPVLRPSSSARILIASQAPGTKVHLSGMPF
TDASGDRLRSWLGVTSDEFYDIEKFAIVPMGFCFPGQDAKGGDLPPRRECAPAWRAPLMALMPRIDLVLTIGIYAQSWHM
AAARRPSLTETVMDWRAIWENSVGAKVLPLPHPSWRNSGWLKQNPWFEMDLLPFLRSEIRYRLG

Sequences:

>Translated_224_residues
MHQRAALASGDLQPAECGRLSVELDSLAATVRACRICVENPVGKPLPHEPRPVLRPSSSARILIASQAPGTKVHLSGMPF
TDASGDRLRSWLGVTSDEFYDIEKFAIVPMGFCFPGQDAKGGDLPPRRECAPAWRAPLMALMPRIDLVLTIGIYAQSWHM
AAARRPSLTETVMDWRAIWENSVGAKVLPLPHPSWRNSGWLKQNPWFEMDLLPFLRSEIRYRLG
>Mature_224_residues
MHQRAALASGDLQPAECGRLSVELDSLAATVRACRICVENPVGKPLPHEPRPVLRPSSSARILIASQAPGTKVHLSGMPF
TDASGDRLRSWLGVTSDEFYDIEKFAIVPMGFCFPGQDAKGGDLPPRRECAPAWRAPLMALMPRIDLVLTIGIYAQSWHM
AAARRPSLTETVMDWRAIWENSVGAKVLPLPHPSWRNSGWLKQNPWFEMDLLPFLRSEIRYRLG

Specific function: Unknown

COG id: COG1573

COG function: function code L; Uracil-DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005122 [H]

Pfam domain/function: PF03167 UDG [H]

EC number: NA

Molecular weight: Translated: 24935; Mature: 24935

Theoretical pI: Translated: 8.77; Mature: 8.77

Prosite motif: PS00307 LECTIN_LEGUME_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHQRAALASGDLQPAECGRLSVELDSLAATVRACRICVENPVGKPLPHEPRPVLRPSSSA
CCCCCCCCCCCCCHHCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
RILIASQAPGTKVHLSGMPFTDASGDRLRSWLGVTSDEFYDIEKFAIVPMGFCFPGQDAK
EEEEEECCCCCEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCCCCC
GGDLPPRRECAPAWRAPLMALMPRIDLVLTIGIYAQSWHMAAARRPSLTETVMDWRAIWE
CCCCCCCCCCCCHHHHHHHHHHCHHEEEEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHC
NSVGAKVLPLPHPSWRNSGWLKQNPWFEMDLLPFLRSEIRYRLG
CCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MHQRAALASGDLQPAECGRLSVELDSLAATVRACRICVENPVGKPLPHEPRPVLRPSSSA
CCCCCCCCCCCCCHHCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
RILIASQAPGTKVHLSGMPFTDASGDRLRSWLGVTSDEFYDIEKFAIVPMGFCFPGQDAK
EEEEEECCCCCEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCCCCC
GGDLPPRRECAPAWRAPLMALMPRIDLVLTIGIYAQSWHMAAARRPSLTETVMDWRAIWE
CCCCCCCCCCCCHHHHHHHHHHCHHEEEEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHC
NSVGAKVLPLPHPSWRNSGWLKQNPWFEMDLLPFLRSEIRYRLG
CCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]