| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13470706
Identifier: 13470706
GI number: 13470706
Start: 353719
End: 354537
Strand: Reverse
Name: 13470706
Synonym: mll0482
Alternate gene names: NA
Gene position: 354537-353719 (Counterclockwise)
Preceding gene: 13470707
Following gene: 13470705
Centisome position: 5.04
GC content: 54.33
Gene sequence:
>819_bases ATGATTAAAGATTTCAAGAGGATCGACGGAGCTTCCTCGCGCGGCTCGCTATTCCAATGGAACTACAACGGCTCGGTGAT TTCCGCTTTCTGGCCAAATGAATATTCTACAATGTCGCCCGATATCGATGCTGCCGCTAGCGCTTTGAATAACGGAGTAT TGGCGGCTGGAAATGCGGTCATAGGTGCGGCGGAGAGGCTGAAGAGGACCGACGAAATTCGTGACGTGTCCCTAGAGGCA ATCGCCCGTTACGTGGCCGCTCCCTTCAGGTATTTGCGTGACAGGGCAATTGACGAACGGAACAGCGTCGGCATTTCCCG CAACTCTCTTGCTCAGCCAATCCAAATCCCAAACCCCACGCCCTTCTCAATCGCAGCAGACAGTTTGGAGCGGCAGGAAG TGCGCCGGATGCTTGACGGCTTCGACCAGATTGGAGAGGCGTTCGATTGGGTAATGCAGTCGCCCGGCATCACGGTCCTG AACGCTGTCGCTCCGTCGATTGACCTGACGATATTTTCCAAGGACCAACAGCTTGCCGGATTGATCGTCGAAGAATTCGC AATCAGGAAGTGGGCGCGCACGATCGACAACCCGTCGAACGACAATCTCGCCACGGCTGCAAACCCACTCAAAAACAAGA TGAGCGACGATCTTGTTCGCGATCTAGCGAAGGCTCGGTTGGATGGCTTGAAACTACGCGAGCAAGCGGTCAGCGATGCT GAAAAACTGCTCTTGGCAGTTATTGCCTTTGCCAGCCAAGCCGGAAATCTCACTCCCGATGAAGCGTTCAAAATGCTCAT GGGGCAGAAAGTCGCCTAG
Upstream 100 bases:
>100_bases TCACTTTCCATTTAACAACAATTATTAATACTTGATACGTTCTCTGCAAACGCATACGCCTTTCTACGTGTAACACCAAA GCACCTCGAAAGGGCACGCC
Downstream 100 bases:
>100_bases CAATTCGGACGATTCGTTAGGCGTTCTCCGGTCGGGTTGTTCGAAGGATTTTCCACATGGTCCGACGAGCAATCCGACCG GTCATAAACCTCCCATAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 272; Mature: 272
Protein sequence:
>272_residues MIKDFKRIDGASSRGSLFQWNYNGSVISAFWPNEYSTMSPDIDAAASALNNGVLAAGNAVIGAAERLKRTDEIRDVSLEA IARYVAAPFRYLRDRAIDERNSVGISRNSLAQPIQIPNPTPFSIAADSLERQEVRRMLDGFDQIGEAFDWVMQSPGITVL NAVAPSIDLTIFSKDQQLAGLIVEEFAIRKWARTIDNPSNDNLATAANPLKNKMSDDLVRDLAKARLDGLKLREQAVSDA EKLLLAVIAFASQAGNLTPDEAFKMLMGQKVA
Sequences:
>Translated_272_residues MIKDFKRIDGASSRGSLFQWNYNGSVISAFWPNEYSTMSPDIDAAASALNNGVLAAGNAVIGAAERLKRTDEIRDVSLEA IARYVAAPFRYLRDRAIDERNSVGISRNSLAQPIQIPNPTPFSIAADSLERQEVRRMLDGFDQIGEAFDWVMQSPGITVL NAVAPSIDLTIFSKDQQLAGLIVEEFAIRKWARTIDNPSNDNLATAANPLKNKMSDDLVRDLAKARLDGLKLREQAVSDA EKLLLAVIAFASQAGNLTPDEAFKMLMGQKVA >Mature_272_residues MIKDFKRIDGASSRGSLFQWNYNGSVISAFWPNEYSTMSPDIDAAASALNNGVLAAGNAVIGAAERLKRTDEIRDVSLEA IARYVAAPFRYLRDRAIDERNSVGISRNSLAQPIQIPNPTPFSIAADSLERQEVRRMLDGFDQIGEAFDWVMQSPGITVL NAVAPSIDLTIFSKDQQLAGLIVEEFAIRKWARTIDNPSNDNLATAANPLKNKMSDDLVRDLAKARLDGLKLREQAVSDA EKLLLAVIAFASQAGNLTPDEAFKMLMGQKVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29786; Mature: 29786
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKDFKRIDGASSRGSLFQWNYNGSVISAFWPNEYSTMSPDIDAAASALNNGVLAAGNAV CCCCHHHHCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCHHHHHHHHCCCEEECCCHH IGAAERLKRTDEIRDVSLEAIARYVAAPFRYLRDRAIDERNSVGISRNSLAQPIQIPNPT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHCCCCCCCCCCC PFSIAADSLERQEVRRMLDGFDQIGEAFDWVMQSPGITVLNAVAPSIDLTIFSKDQQLAG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHCCCEEEEEECCCHHHHH LIVEEFAIRKWARTIDNPSNDNLATAANPLKNKMSDDLVRDLAKARLDGLKLREQAVSDA HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EKLLLAVIAFASQAGNLTPDEAFKMLMGQKVA HHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCC >Mature Secondary Structure MIKDFKRIDGASSRGSLFQWNYNGSVISAFWPNEYSTMSPDIDAAASALNNGVLAAGNAV CCCCHHHHCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCHHHHHHHHCCCEEECCCHH IGAAERLKRTDEIRDVSLEAIARYVAAPFRYLRDRAIDERNSVGISRNSLAQPIQIPNPT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHCCCCCCCCCCC PFSIAADSLERQEVRRMLDGFDQIGEAFDWVMQSPGITVLNAVAPSIDLTIFSKDQQLAG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHCCCEEEEEECCCHHHHH LIVEEFAIRKWARTIDNPSNDNLATAANPLKNKMSDDLVRDLAKARLDGLKLREQAVSDA HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EKLLLAVIAFASQAGNLTPDEAFKMLMGQKVA HHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA