| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13470696
Identifier: 13470696
GI number: 13470696
Start: 343873
End: 344838
Strand: Reverse
Name: 13470696
Synonym: mll0472
Alternate gene names: NA
Gene position: 344838-343873 (Counterclockwise)
Preceding gene: 13470697
Following gene: 13470694
Centisome position: 4.9
GC content: 61.39
Gene sequence:
>966_bases ATGAGCATCGCCAACGCTGCCAAGGCGCGACATCGCGCCAACCGAACGGGCAAGATGAAAGTCGGCCGGTGCATCCTGGC CGACAAGCCGAAGCCAACAGGGCCATTTCAGATCAACAATGCGCGCGTGCGTGAACTGGAACGGATCATAGTAAGCCGTT ACGGGGCGATCCTGCCCGAGACCGATGACGCGGACCTTTTCATCGAGGTTGCCGCCTATTCGCTCAACGCTCACTGCCTG AGCAAAGGGCTCGATCTGGACAAGGTCTTGTCTGACTGGTGCCGGCGGTGGGCACCTTGGGCTTTGCAGCGGGCGGGTAC GATCATCCGCCCGATTCTCAATATGCTGGTTGGGCGCCGCTACCAGATGAAGGCCGACGAAGCCGCGCGCAAAATCTGCC TGACGCTGTTGGAGCGGACGGCGCTCGAAATCAGAACGATGGGGGCGAGTGATTTTTCTGCCCGCGTCCGCAAGGGCATT GCCAAGGACGTAAAGCGGTCGGGTGATCGGGCAAGGCAAACAGCCAAGCGGCGCGCTCGCGGTGTCGAACCTCGCGAAAG CTGGCTGGCCAAAAATTCCCTGTCCAAAGGTCGCCCGTGGGATGCCGAGGGGATTTCTCGCGCGCAATGGTATCGGCGCT TTCGTGAGACAGGTCCGTCGCTAGTAGGTGTATCTACCAAAAGCGACACACTTGTCTCATCGGTGCCTGTCGAGCCGTCG CAAGAGGCCCCCTCACGGGGTCCAAGCTCGCTCACGCTCGCAAAAAAATCTTCTCTCAGCGGGGCCGAAGGCCCGCCCGT AGGGCGGAATGCGGCGTTGGTCTCGGGCTCGGCGGGTGTCGTCGTGGCGCTACCGTCAAAGTGCCTTCCTTCCCTCCAAA GCAGAAATGGCGCGGTAGACGCCAACGACGGCGCCGAACAGTGCGACGGTGACGAAGCACTCCGCCATATGGGAGTTGCG AGCTAA
Upstream 100 bases:
>100_bases CGCCGTCCTCCCCCAAATTCGCAGGCTCTTCAACTTGTCGATCGCCGACGCCATCGCGGCCGAGCGACGCGCGAACCTCA TCCGGGCGAGGGCGCACTAG
Downstream 100 bases:
>100_bases ATGGAACAGAACCGAGACAAAGCGGCATCGATCGTTCCGTTTCCACTGCACCGCAATGTGCGGCTGGTACGTGAAACTAT CGGCATTTTGGAAAAGCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 321; Mature: 320
Protein sequence:
>321_residues MSIANAAKARHRANRTGKMKVGRCILADKPKPTGPFQINNARVRELERIIVSRYGAILPETDDADLFIEVAAYSLNAHCL SKGLDLDKVLSDWCRRWAPWALQRAGTIIRPILNMLVGRRYQMKADEAARKICLTLLERTALEIRTMGASDFSARVRKGI AKDVKRSGDRARQTAKRRARGVEPRESWLAKNSLSKGRPWDAEGISRAQWYRRFRETGPSLVGVSTKSDTLVSSVPVEPS QEAPSRGPSSLTLAKKSSLSGAEGPPVGRNAALVSGSAGVVVALPSKCLPSLQSRNGAVDANDGAEQCDGDEALRHMGVA S
Sequences:
>Translated_321_residues MSIANAAKARHRANRTGKMKVGRCILADKPKPTGPFQINNARVRELERIIVSRYGAILPETDDADLFIEVAAYSLNAHCL SKGLDLDKVLSDWCRRWAPWALQRAGTIIRPILNMLVGRRYQMKADEAARKICLTLLERTALEIRTMGASDFSARVRKGI AKDVKRSGDRARQTAKRRARGVEPRESWLAKNSLSKGRPWDAEGISRAQWYRRFRETGPSLVGVSTKSDTLVSSVPVEPS QEAPSRGPSSLTLAKKSSLSGAEGPPVGRNAALVSGSAGVVVALPSKCLPSLQSRNGAVDANDGAEQCDGDEALRHMGVA S >Mature_320_residues SIANAAKARHRANRTGKMKVGRCILADKPKPTGPFQINNARVRELERIIVSRYGAILPETDDADLFIEVAAYSLNAHCLS KGLDLDKVLSDWCRRWAPWALQRAGTIIRPILNMLVGRRYQMKADEAARKICLTLLERTALEIRTMGASDFSARVRKGIA KDVKRSGDRARQTAKRRARGVEPRESWLAKNSLSKGRPWDAEGISRAQWYRRFRETGPSLVGVSTKSDTLVSSVPVEPSQ EAPSRGPSSLTLAKKSSLSGAEGPPVGRNAALVSGSAGVVVALPSKCLPSLQSRNGAVDANDGAEQCDGDEALRHMGVAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34865; Mature: 34734
Theoretical pI: Translated: 10.84; Mature: 10.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIANAAKARHRANRTGKMKVGRCILADKPKPTGPFQINNARVRELERIIVSRYGAILPE CCCCHHHHHHHHHCCCCCEECCEEEECCCCCCCCCEEECCHHHHHHHHHHHHHHCCCCCC TDDADLFIEVAAYSLNAHCLSKGLDLDKVLSDWCRRWAPWALQRAGTIIRPILNMLVGRR CCCCCEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHCCC YQMKADEAARKICLTLLERTALEIRTMGASDFSARVRKGIAKDVKRSGDRARQTAKRRAR CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHC GVEPRESWLAKNSLSKGRPWDAEGISRAQWYRRFRETGPSLVGVSTKSDTLVSSVPVEPS CCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHCCCCCCC QEAPSRGPSSLTLAKKSSLSGAEGPPVGRNAALVSGSAGVVVALPSKCLPSLQSRNGAVD CCCCCCCCCCEEEEHHCCCCCCCCCCCCCCCEEEECCCCEEEECCHHHHHHHHHCCCCCC ANDGAEQCDGDEALRHMGVAS CCCCHHHCCHHHHHHHCCCCC >Mature Secondary Structure SIANAAKARHRANRTGKMKVGRCILADKPKPTGPFQINNARVRELERIIVSRYGAILPE CCCHHHHHHHHHCCCCCEECCEEEECCCCCCCCCEEECCHHHHHHHHHHHHHHCCCCCC TDDADLFIEVAAYSLNAHCLSKGLDLDKVLSDWCRRWAPWALQRAGTIIRPILNMLVGRR CCCCCEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHCCC YQMKADEAARKICLTLLERTALEIRTMGASDFSARVRKGIAKDVKRSGDRARQTAKRRAR CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHC GVEPRESWLAKNSLSKGRPWDAEGISRAQWYRRFRETGPSLVGVSTKSDTLVSSVPVEPS CCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHCCCCCCC QEAPSRGPSSLTLAKKSSLSGAEGPPVGRNAALVSGSAGVVVALPSKCLPSLQSRNGAVD CCCCCCCCCCEEEEHHCCCCCCCCCCCCCCCEEEECCCCEEEECCHHHHHHHHHCCCCCC ANDGAEQCDGDEALRHMGVAS CCCCHHHCCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA