| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is 13470694
Identifier: 13470694
GI number: 13470694
Start: 343597
End: 343815
Strand: Reverse
Name: 13470694
Synonym: msl0470
Alternate gene names: NA
Gene position: 343815-343597 (Counterclockwise)
Preceding gene: 13470696
Following gene: 13470693
Centisome position: 4.89
GC content: 57.99
Gene sequence:
>219_bases GTGCGGCTGGTACGTGAAACTATCGGCATTTTGGAAAAGCGCCGCGGCGCCGCGGCTGATCGTTTCTGGCGTTCGACCGT TCGCCAGCAAATCGGACGAATGCAAGTCTGCGGCCTTCATGACCGCAACGTGATCAACGACCAAATTGAAAAGTTTGCCC TAGTCGTCTTCGACGCGCTGCGCTCGTCGGCGCCTCAACAGGATGGTGATGCGGCATGA
Upstream 100 bases:
>100_bases CGACGGTGACGAAGCACTCCGCCATATGGGAGTTGCGAGCTAAATGGAACAGAACCGAGACAAAGCGGCATCGATCGTTC CGTTTCCACTGCACCGCAAT
Downstream 100 bases:
>100_bases GCGACGAACAGCAAGCCCAGATGCCGCTCGACCTGTCCACGGTCGAGCCGAGCGAACCTGATCAGACCGCCACCAAGCCG CGGAAGACTAATCCATGGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 72; Mature: 72
Protein sequence:
>72_residues MRLVRETIGILEKRRGAAADRFWRSTVRQQIGRMQVCGLHDRNVINDQIEKFALVVFDALRSSAPQQDGDAA
Sequences:
>Translated_72_residues MRLVRETIGILEKRRGAAADRFWRSTVRQQIGRMQVCGLHDRNVINDQIEKFALVVFDALRSSAPQQDGDAA >Mature_72_residues MRLVRETIGILEKRRGAAADRFWRSTVRQQIGRMQVCGLHDRNVINDQIEKFALVVFDALRSSAPQQDGDAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8182; Mature: 8182
Theoretical pI: Translated: 10.68; Mature: 10.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLVRETIGILEKRRGAAADRFWRSTVRQQIGRMQVCGLHDRNVINDQIEKFALVVFDAL CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHH RSSAPQQDGDAA HHCCCCCCCCCC >Mature Secondary Structure MRLVRETIGILEKRRGAAADRFWRSTVRQQIGRMQVCGLHDRNVINDQIEKFALVVFDAL CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHH RSSAPQQDGDAA HHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA