| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is 13470691
Identifier: 13470691
GI number: 13470691
Start: 341292
End: 341996
Strand: Reverse
Name: 13470691
Synonym: mll0467
Alternate gene names: NA
Gene position: 341996-341292 (Counterclockwise)
Preceding gene: 13470692
Following gene: 13470689
Centisome position: 4.86
GC content: 60.0
Gene sequence:
>705_bases ATGAGGCAGAAAAAACTGAAGCCTGCCGGCGTTCGGGTCGACGGTTCAAAGCGCATCGACCTGAAGGAAAAGCGAACTAG GCGAAAACAAAACCGGCAGGTCGCGTCTGCCAAATTGCTTCAGGCAGCGCCGGTCGAGGATACGCGGGTCGCGGACGTAT GGCGCCGTGACGAGCTGCGAAGTTCGCTACGCATCAAGGCGGAAGGCCAGGCTCGCCGGATGACGAGGCTTTCCAAAGCG GATGGCGGCAAGGAGGGCATAAGGGTGACCGCGGTTAAGGTCCGCATTTCGGCCCAGAGGTCCGAGACGCAGGCGATCCG GTCGCGGCCTGGCACGTTTGAATGGAGGTATGGTCGTAAGCGTCAAGACGCCTTGTTCCATGCAGGCAGTCACTTGGCGG TGCTATGGGAGCGCGCCGGCATTGCGGTTGCCAGCTCGGCTGATTTCCTGCGCGGTATCGGATCTGGCTACGCCAGCGGG ATATCGGATGGGCGTGTCGCCGCGATCGACAAACTGGACGGATTCGTCAAGGAAATGGGGCGCGTACCGGCCGAGCGCAT GATCGATTATTGCGTGTCGGGGCTGACGACGGCTGAAATCGCCATGAAGCATGGCGCGAAGGAACGTGAGATGGCGCCTG TGCTCCATTTCGACCTTCGCAATTGCGCCGTGCACTTCAAATTTATCAGTGGCAATAGGCGTTGA
Upstream 100 bases:
>100_bases GTCGGCACTATGCCAACGTGATCGTGCCGGAACGCGTGACATCTACCGATGACCTGCCACCCCCTCCGATCCTCCAGACG ATCACAAGAAAGGTTGCTTG
Downstream 100 bases:
>100_bases CTTTCAACGCGAAACCTCGTAATAGATTGCCATTCGCAGAAATGCGCCAAGAACCCGCCCGCGAGGCGGGTTTTTTGTCG GTAGCGATGTGACGCTCAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 234; Mature: 234
Protein sequence:
>234_residues MRQKKLKPAGVRVDGSKRIDLKEKRTRRKQNRQVASAKLLQAAPVEDTRVADVWRRDELRSSLRIKAEGQARRMTRLSKA DGGKEGIRVTAVKVRISAQRSETQAIRSRPGTFEWRYGRKRQDALFHAGSHLAVLWERAGIAVASSADFLRGIGSGYASG ISDGRVAAIDKLDGFVKEMGRVPAERMIDYCVSGLTTAEIAMKHGAKEREMAPVLHFDLRNCAVHFKFISGNRR
Sequences:
>Translated_234_residues MRQKKLKPAGVRVDGSKRIDLKEKRTRRKQNRQVASAKLLQAAPVEDTRVADVWRRDELRSSLRIKAEGQARRMTRLSKA DGGKEGIRVTAVKVRISAQRSETQAIRSRPGTFEWRYGRKRQDALFHAGSHLAVLWERAGIAVASSADFLRGIGSGYASG ISDGRVAAIDKLDGFVKEMGRVPAERMIDYCVSGLTTAEIAMKHGAKEREMAPVLHFDLRNCAVHFKFISGNRR >Mature_234_residues MRQKKLKPAGVRVDGSKRIDLKEKRTRRKQNRQVASAKLLQAAPVEDTRVADVWRRDELRSSLRIKAEGQARRMTRLSKA DGGKEGIRVTAVKVRISAQRSETQAIRSRPGTFEWRYGRKRQDALFHAGSHLAVLWERAGIAVASSADFLRGIGSGYASG ISDGRVAAIDKLDGFVKEMGRVPAERMIDYCVSGLTTAEIAMKHGAKEREMAPVLHFDLRNCAVHFKFISGNRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26183; Mature: 26183
Theoretical pI: Translated: 11.52; Mature: 11.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQKKLKPAGVRVDGSKRIDLKEKRTRRKQNRQVASAKLLQAAPVEDTRVADVWRRDELR CCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH SSLRIKAEGQARRMTRLSKADGGKEGIRVTAVKVRISAQRSETQAIRSRPGTFEWRYGRK HHEEEEECCHHHHHHHHHHCCCCCCCEEEEEEEEEEECHHHHHHHHHCCCCCEEECCCCC RQDALFHAGSHLAVLWERAGIAVASSADFLRGIGSGYASGISDGRVAAIDKLDGFVKEMG HHHHHHHCCCCEEEEEECCCEEEECCHHHHHHHHCHHHCCCCCCCEEHHHHHHHHHHHHC RVPAERMIDYCVSGLTTAEIAMKHGAKEREMAPVLHFDLRNCAVHFKFISGNRR CCCHHHHHHHHHHCCHHHHHHHHCCCCCHHCCHHHHEECCCCEEEEEEECCCCC >Mature Secondary Structure MRQKKLKPAGVRVDGSKRIDLKEKRTRRKQNRQVASAKLLQAAPVEDTRVADVWRRDELR CCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH SSLRIKAEGQARRMTRLSKADGGKEGIRVTAVKVRISAQRSETQAIRSRPGTFEWRYGRK HHEEEEECCHHHHHHHHHHCCCCCCCEEEEEEEEEEECHHHHHHHHHCCCCCEEECCCCC RQDALFHAGSHLAVLWERAGIAVASSADFLRGIGSGYASGISDGRVAAIDKLDGFVKEMG HHHHHHHCCCCEEEEEECCCEEEECCHHHHHHHHCHHHCCCCCCCEEHHHHHHHHHHHHC RVPAERMIDYCVSGLTTAEIAMKHGAKEREMAPVLHFDLRNCAVHFKFISGNRR CCCHHHHHHHHHHCCHHHHHHHHCCCCCHHCCHHHHEECCCCEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA