| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13470682
Identifier: 13470682
GI number: 13470682
Start: 332475
End: 333665
Strand: Reverse
Name: 13470682
Synonym: mll0458
Alternate gene names: NA
Gene position: 333665-332475 (Counterclockwise)
Preceding gene: 13470683
Following gene: 13470681
Centisome position: 4.74
GC content: 63.98
Gene sequence:
>1191_bases GTGTTTCGCCTCAATAATCAGCAATCCCTCAGACGGAGCAATCCAATGGACGACATGAACGGAGGCGCTTCGGCGCCCGC CGAGACGAACCCTGTTGCCGCCGAACCGGTTTCGACGCCGAATCCGATCAGCACCGATCCGAAGACGGTCGAGGCCAAGC CGGAACCGAAGGCCGACAAGGCCCCGACCACCCGCGAGGCGCTGAAGGCGGCCGCAGCGAAGGTCGCCGAAAAGGCGAAA GCCGACGAAGGCGACGAGGGCAAGAAGCCGGCGCCGGTACAGTCTCAGCCGAAGACGGGCGAGAAGCCGGCGGACAAGGC CGCGCTGCCCGATCCCAAGCCAACCAAGGGCGCAGAGACCACCACCACGGCAAAGCCGGCCGACACGACCATGAGGGCCG AACCGAAGGCGACCAGCCATCATGAGGCGCCGGCACGCTTCAAGAGCGACGCCGCCGCTATGGCCGAATGGGAGAAAGCC CCGGAGCCGGTCAAGGCCGCTGTTCACCGGTCGATCCGCGAGCTTGAGGCCGGCATCGAGAAGCACCGCGTCTCTGCGGA GGCCTTCGAACAGGTAAAGGACTTCGACGATCTGGCGAAGCGGAACAACACGTCGCTGCGCGATGCAATGACCCGCTACA CCAATCTTGAACGGACCCTGTTGACCAACCCGCTTCAGGGCATCCAGCAGGTTTGCGAATATGCCGGCATTTCGCTGCGC GACCTGGCCGCGTATGTGGTCGGCCAGAAGCCGGAACAGGTGCAAAGCCAGAACGACGCCACGATCCGCGAGCTTCGCCA GCAGGTCGCACAGCTTCAGCAGAGCGTCGGCGGCGTCACCACGTCGATGCAGCAGCAGCATGTCGCCGGCATCGAAGCCC AGGTCGAAAAGTTCAAGGCTGACAATCCCCGGTTCGAAGAGCTGGCGGAAGACATCGCCTTTTTCCTCAAGTCGGGGAAA ACCAAGGATTTGGCCGAAGCATATTCGCTGGCGGAACGGCTCAACCCCGCCGCAGCGAGATCGGTTACAGCAGCGCCTCA GACGCGCACCGCTCCAGACCCTCAGGCTCAGACCCTGAAGGGCCAGAAATCAGTCACAGGCGCGCCCTCGGCCGGCTCAG ACCCGGCGACGAAGCGAGCTTCCACCTCAATCAAGGATTCGCTCCGGCGGGCAATGGCCCAGACCGGCTGA
Upstream 100 bases:
>100_bases GATCCGGCGCGTCTTCGCCGTCGGCAAAAGCCCAAGGTCGACCGCAAGGCGATCAAGGACACGGTGCAAAAGGCAAAAGC CCGGTTCGACCGCGGCGAGC
Downstream 100 bases:
>100_bases TCCGCGTTCATAAAGGAGGGCCGAAATGGCTCTTACTTCAGTCGAAAAAAATCAGGAAATTCTGTCCCTGGCCCTTGAGG ATCGCTCGCAAGGCTACCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 396; Mature: 396
Protein sequence:
>396_residues MFRLNNQQSLRRSNPMDDMNGGASAPAETNPVAAEPVSTPNPISTDPKTVEAKPEPKADKAPTTREALKAAAAKVAEKAK ADEGDEGKKPAPVQSQPKTGEKPADKAALPDPKPTKGAETTTTAKPADTTMRAEPKATSHHEAPARFKSDAAAMAEWEKA PEPVKAAVHRSIRELEAGIEKHRVSAEAFEQVKDFDDLAKRNNTSLRDAMTRYTNLERTLLTNPLQGIQQVCEYAGISLR DLAAYVVGQKPEQVQSQNDATIRELRQQVAQLQQSVGGVTTSMQQQHVAGIEAQVEKFKADNPRFEELAEDIAFFLKSGK TKDLAEAYSLAERLNPAAARSVTAAPQTRTAPDPQAQTLKGQKSVTGAPSAGSDPATKRASTSIKDSLRRAMAQTG
Sequences:
>Translated_396_residues MFRLNNQQSLRRSNPMDDMNGGASAPAETNPVAAEPVSTPNPISTDPKTVEAKPEPKADKAPTTREALKAAAAKVAEKAK ADEGDEGKKPAPVQSQPKTGEKPADKAALPDPKPTKGAETTTTAKPADTTMRAEPKATSHHEAPARFKSDAAAMAEWEKA PEPVKAAVHRSIRELEAGIEKHRVSAEAFEQVKDFDDLAKRNNTSLRDAMTRYTNLERTLLTNPLQGIQQVCEYAGISLR DLAAYVVGQKPEQVQSQNDATIRELRQQVAQLQQSVGGVTTSMQQQHVAGIEAQVEKFKADNPRFEELAEDIAFFLKSGK TKDLAEAYSLAERLNPAAARSVTAAPQTRTAPDPQAQTLKGQKSVTGAPSAGSDPATKRASTSIKDSLRRAMAQTG >Mature_396_residues MFRLNNQQSLRRSNPMDDMNGGASAPAETNPVAAEPVSTPNPISTDPKTVEAKPEPKADKAPTTREALKAAAAKVAEKAK ADEGDEGKKPAPVQSQPKTGEKPADKAALPDPKPTKGAETTTTAKPADTTMRAEPKATSHHEAPARFKSDAAAMAEWEKA PEPVKAAVHRSIRELEAGIEKHRVSAEAFEQVKDFDDLAKRNNTSLRDAMTRYTNLERTLLTNPLQGIQQVCEYAGISLR DLAAYVVGQKPEQVQSQNDATIRELRQQVAQLQQSVGGVTTSMQQQHVAGIEAQVEKFKADNPRFEELAEDIAFFLKSGK TKDLAEAYSLAERLNPAAARSVTAAPQTRTAPDPQAQTLKGQKSVTGAPSAGSDPATKRASTSIKDSLRRAMAQTG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42518; Mature: 42518
Theoretical pI: Translated: 9.23; Mature: 9.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRLNNQQSLRRSNPMDDMNGGASAPAETNPVAAEPVSTPNPISTDPKTVEAKPEPKADK CCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC APTTREALKAAAAKVAEKAKADEGDEGKKPAPVQSQPKTGEKPADKAALPDPKPTKGAET CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TTTAKPADTTMRAEPKATSHHEAPARFKSDAAAMAEWEKAPEPVKAAVHRSIRELEAGIE CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH KHRVSAEAFEQVKDFDDLAKRNNTSLRDAMTRYTNLERTLLTNPLQGIQQVCEYAGISLR HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH DLAAYVVGQKPEQVQSQNDATIRELRQQVAQLQQSVGGVTTSMQQQHVAGIEAQVEKFKA HHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHC DNPRFEELAEDIAFFLKSGKTKDLAEAYSLAERLNPAAARSVTAAPQTRTAPDPQAQTLK CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCHHHHHC GQKSVTGAPSAGSDPATKRASTSIKDSLRRAMAQTG CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MFRLNNQQSLRRSNPMDDMNGGASAPAETNPVAAEPVSTPNPISTDPKTVEAKPEPKADK CCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC APTTREALKAAAAKVAEKAKADEGDEGKKPAPVQSQPKTGEKPADKAALPDPKPTKGAET CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TTTAKPADTTMRAEPKATSHHEAPARFKSDAAAMAEWEKAPEPVKAAVHRSIRELEAGIE CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH KHRVSAEAFEQVKDFDDLAKRNNTSLRDAMTRYTNLERTLLTNPLQGIQQVCEYAGISLR HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH DLAAYVVGQKPEQVQSQNDATIRELRQQVAQLQQSVGGVTTSMQQQHVAGIEAQVEKFKA HHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHC DNPRFEELAEDIAFFLKSGKTKDLAEAYSLAERLNPAAARSVTAAPQTRTAPDPQAQTLK CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCHHHHHC GQKSVTGAPSAGSDPATKRASTSIKDSLRRAMAQTG CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA