| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13470669
Identifier: 13470669
GI number: 13470669
Start: 318704
End: 319630
Strand: Reverse
Name: 13470669
Synonym: mll0441
Alternate gene names: NA
Gene position: 319630-318704 (Counterclockwise)
Preceding gene: 13470670
Following gene: 13470668
Centisome position: 4.54
GC content: 65.05
Gene sequence:
>927_bases ATGGACCTGTCACCAGCAGGCGCCGCATTCGTGCGCGTCGAAGAAGGCGTCGAACTGAAATTCTATCTCGATTCCGTCGG CGTCGGTACGATCGGGATCGGCTTCACCTGGGGCTCTGCCGCCTTTCGTCAATGGTGGGCTGACAACAAGCCCGGCATGA CGTTCGGCATAGGCGCGACCATGACCCGCAACGAAGCCGAAAAGGCGCTGATCTATTGCTTTGCGAACGAGTACGGCAAG GCGGTCAACGCCTTCCTTGGCCACGAGGTGCCGCAGAACGTTTTCGACGGCATGGCGTCGCCGGTCTACAATCTCGGCAC GGGCTCGCTCGGGTGGAAGTGGGCGGCATTCGCCAAGCGCGGCGACTATTCGGCTTGCGCGGCGGTCCTTCGCTCAACCG GCACCACGGCGAAGGGCAAGACGCTGGCCGGCCTGGTGCGCCGTCGCCGGGAAGAGGCGGCCCTGATCGAAAGCGGGATC TATGCGGGCGTTGGCAAGATCCAGGCGGCAACGGACGATCCGGTCGATACCGCCATGCTCGATAGCGTGCTGACCCGTGG CGAGCGCGGCCCGTCGGTCGCGGCACTGGTCAGCAACCTGGCTGCGCTAGGCTACTACAAGGGCAAGCTGGACGATGTTT TCGGCTACGGCACGGAAGCGGCCGTACTGGCGTTCCAGCGTGACCACGGGCTTACAGCAGACGGCTATGCGGGTGAAATC ACGCTTGCGGCCATCACCGCCGCGCTCGCGGCTCCCAAGCCTCCGCAGACCCCGCCAATCGGCGGACCCTCTCAGCAGCC CGCAGCGCCAGCCCGGTCGATGGGCTCGGGCAAGGTCGCGGCCGCCGCCGGCATCGGCGCGCTGATCTATGTCGCCGTGA TCTCTTGGTGGCACGAGATCACCAGGTTCGTTTCCAACCTGTTTTGA
Upstream 100 bases:
>100_bases CGATCCCGATGCTGTCGCCCTTGTGCAGGCTCTCGGGCTGGACCCTGCCGTCATCCTCGCGCCGTAAGCGCTCGACCTCA ACTTCACCGAAGGAAAGACC
Downstream 100 bases:
>100_bases AATCCGCGCCGACCGGTCCCGCCGGTAATCCAGAAAGAAACAATCATGATACGAACCTGTAAAAGAGCCTATTTCCTTTG GCTTTTGGCGGCAGCATTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 308; Mature: 308
Protein sequence:
>308_residues MDLSPAGAAFVRVEEGVELKFYLDSVGVGTIGIGFTWGSAAFRQWWADNKPGMTFGIGATMTRNEAEKALIYCFANEYGK AVNAFLGHEVPQNVFDGMASPVYNLGTGSLGWKWAAFAKRGDYSACAAVLRSTGTTAKGKTLAGLVRRRREEAALIESGI YAGVGKIQAATDDPVDTAMLDSVLTRGERGPSVAALVSNLAALGYYKGKLDDVFGYGTEAAVLAFQRDHGLTADGYAGEI TLAAITAALAAPKPPQTPPIGGPSQQPAAPARSMGSGKVAAAAGIGALIYVAVISWWHEITRFVSNLF
Sequences:
>Translated_308_residues MDLSPAGAAFVRVEEGVELKFYLDSVGVGTIGIGFTWGSAAFRQWWADNKPGMTFGIGATMTRNEAEKALIYCFANEYGK AVNAFLGHEVPQNVFDGMASPVYNLGTGSLGWKWAAFAKRGDYSACAAVLRSTGTTAKGKTLAGLVRRRREEAALIESGI YAGVGKIQAATDDPVDTAMLDSVLTRGERGPSVAALVSNLAALGYYKGKLDDVFGYGTEAAVLAFQRDHGLTADGYAGEI TLAAITAALAAPKPPQTPPIGGPSQQPAAPARSMGSGKVAAAAGIGALIYVAVISWWHEITRFVSNLF >Mature_308_residues MDLSPAGAAFVRVEEGVELKFYLDSVGVGTIGIGFTWGSAAFRQWWADNKPGMTFGIGATMTRNEAEKALIYCFANEYGK AVNAFLGHEVPQNVFDGMASPVYNLGTGSLGWKWAAFAKRGDYSACAAVLRSTGTTAKGKTLAGLVRRRREEAALIESGI YAGVGKIQAATDDPVDTAMLDSVLTRGERGPSVAALVSNLAALGYYKGKLDDVFGYGTEAAVLAFQRDHGLTADGYAGEI TLAAITAALAAPKPPQTPPIGGPSQQPAAPARSMGSGKVAAAAGIGALIYVAVISWWHEITRFVSNLF
Specific function: Unknown
COG id: COG3772
COG function: function code R; Phage-related lysozyme (muraminidase)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32236; Mature: 32236
Theoretical pI: Translated: 7.49; Mature: 7.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLSPAGAAFVRVEEGVELKFYLDSVGVGTIGIGFTWGSAAFRQWWADNKPGMTFGIGAT CCCCCCCCEEEEECCCCEEEEEECCCCCCEEEEEEECHHHHHHHHHCCCCCCEEEECCCC MTRNEAEKALIYCFANEYGKAVNAFLGHEVPQNVFDGMASPVYNLGTGSLGWKWAAFAKR CCCCCHHHEEEEEEHHHHHHHHHHHHCCCCHHHHHHHHHCCHHCCCCCCCCCHHHHHHHC GDYSACAAVLRSTGTTAKGKTLAGLVRRRREEAALIESGIYAGVGKIQAATDDPVDTAML CCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHH DSVLTRGERGPSVAALVSNLAALGYYKGKLDDVFGYGTEAAVLAFQRDHGLTADGYAGEI HHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCEEEEEECCCCCCCCCCCCHH TLAAITAALAAPKPPQTPPIGGPSQQPAAPARSMGSGKVAAAAGIGALIYVAVISWWHEI HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH TRFVSNLF HHHHHHCC >Mature Secondary Structure MDLSPAGAAFVRVEEGVELKFYLDSVGVGTIGIGFTWGSAAFRQWWADNKPGMTFGIGAT CCCCCCCCEEEEECCCCEEEEEECCCCCCEEEEEEECHHHHHHHHHCCCCCCEEEECCCC MTRNEAEKALIYCFANEYGKAVNAFLGHEVPQNVFDGMASPVYNLGTGSLGWKWAAFAKR CCCCCHHHEEEEEEHHHHHHHHHHHHCCCCHHHHHHHHHCCHHCCCCCCCCCHHHHHHHC GDYSACAAVLRSTGTTAKGKTLAGLVRRRREEAALIESGIYAGVGKIQAATDDPVDTAML CCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHH DSVLTRGERGPSVAALVSNLAALGYYKGKLDDVFGYGTEAAVLAFQRDHGLTADGYAGEI HHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCEEEEEECCCCCCCCCCCCHH TLAAITAALAAPKPPQTPPIGGPSQQPAAPARSMGSGKVAAAAGIGALIYVAVISWWHEI HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH TRFVSNLF HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA