Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

Click here to switch to the map view.

The map label for this gene is 13470669

Identifier: 13470669

GI number: 13470669

Start: 318704

End: 319630

Strand: Reverse

Name: 13470669

Synonym: mll0441

Alternate gene names: NA

Gene position: 319630-318704 (Counterclockwise)

Preceding gene: 13470670

Following gene: 13470668

Centisome position: 4.54

GC content: 65.05

Gene sequence:

>927_bases
ATGGACCTGTCACCAGCAGGCGCCGCATTCGTGCGCGTCGAAGAAGGCGTCGAACTGAAATTCTATCTCGATTCCGTCGG
CGTCGGTACGATCGGGATCGGCTTCACCTGGGGCTCTGCCGCCTTTCGTCAATGGTGGGCTGACAACAAGCCCGGCATGA
CGTTCGGCATAGGCGCGACCATGACCCGCAACGAAGCCGAAAAGGCGCTGATCTATTGCTTTGCGAACGAGTACGGCAAG
GCGGTCAACGCCTTCCTTGGCCACGAGGTGCCGCAGAACGTTTTCGACGGCATGGCGTCGCCGGTCTACAATCTCGGCAC
GGGCTCGCTCGGGTGGAAGTGGGCGGCATTCGCCAAGCGCGGCGACTATTCGGCTTGCGCGGCGGTCCTTCGCTCAACCG
GCACCACGGCGAAGGGCAAGACGCTGGCCGGCCTGGTGCGCCGTCGCCGGGAAGAGGCGGCCCTGATCGAAAGCGGGATC
TATGCGGGCGTTGGCAAGATCCAGGCGGCAACGGACGATCCGGTCGATACCGCCATGCTCGATAGCGTGCTGACCCGTGG
CGAGCGCGGCCCGTCGGTCGCGGCACTGGTCAGCAACCTGGCTGCGCTAGGCTACTACAAGGGCAAGCTGGACGATGTTT
TCGGCTACGGCACGGAAGCGGCCGTACTGGCGTTCCAGCGTGACCACGGGCTTACAGCAGACGGCTATGCGGGTGAAATC
ACGCTTGCGGCCATCACCGCCGCGCTCGCGGCTCCCAAGCCTCCGCAGACCCCGCCAATCGGCGGACCCTCTCAGCAGCC
CGCAGCGCCAGCCCGGTCGATGGGCTCGGGCAAGGTCGCGGCCGCCGCCGGCATCGGCGCGCTGATCTATGTCGCCGTGA
TCTCTTGGTGGCACGAGATCACCAGGTTCGTTTCCAACCTGTTTTGA

Upstream 100 bases:

>100_bases
CGATCCCGATGCTGTCGCCCTTGTGCAGGCTCTCGGGCTGGACCCTGCCGTCATCCTCGCGCCGTAAGCGCTCGACCTCA
ACTTCACCGAAGGAAAGACC

Downstream 100 bases:

>100_bases
AATCCGCGCCGACCGGTCCCGCCGGTAATCCAGAAAGAAACAATCATGATACGAACCTGTAAAAGAGCCTATTTCCTTTG
GCTTTTGGCGGCAGCATTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 308

Protein sequence:

>308_residues
MDLSPAGAAFVRVEEGVELKFYLDSVGVGTIGIGFTWGSAAFRQWWADNKPGMTFGIGATMTRNEAEKALIYCFANEYGK
AVNAFLGHEVPQNVFDGMASPVYNLGTGSLGWKWAAFAKRGDYSACAAVLRSTGTTAKGKTLAGLVRRRREEAALIESGI
YAGVGKIQAATDDPVDTAMLDSVLTRGERGPSVAALVSNLAALGYYKGKLDDVFGYGTEAAVLAFQRDHGLTADGYAGEI
TLAAITAALAAPKPPQTPPIGGPSQQPAAPARSMGSGKVAAAAGIGALIYVAVISWWHEITRFVSNLF

Sequences:

>Translated_308_residues
MDLSPAGAAFVRVEEGVELKFYLDSVGVGTIGIGFTWGSAAFRQWWADNKPGMTFGIGATMTRNEAEKALIYCFANEYGK
AVNAFLGHEVPQNVFDGMASPVYNLGTGSLGWKWAAFAKRGDYSACAAVLRSTGTTAKGKTLAGLVRRRREEAALIESGI
YAGVGKIQAATDDPVDTAMLDSVLTRGERGPSVAALVSNLAALGYYKGKLDDVFGYGTEAAVLAFQRDHGLTADGYAGEI
TLAAITAALAAPKPPQTPPIGGPSQQPAAPARSMGSGKVAAAAGIGALIYVAVISWWHEITRFVSNLF
>Mature_308_residues
MDLSPAGAAFVRVEEGVELKFYLDSVGVGTIGIGFTWGSAAFRQWWADNKPGMTFGIGATMTRNEAEKALIYCFANEYGK
AVNAFLGHEVPQNVFDGMASPVYNLGTGSLGWKWAAFAKRGDYSACAAVLRSTGTTAKGKTLAGLVRRRREEAALIESGI
YAGVGKIQAATDDPVDTAMLDSVLTRGERGPSVAALVSNLAALGYYKGKLDDVFGYGTEAAVLAFQRDHGLTADGYAGEI
TLAAITAALAAPKPPQTPPIGGPSQQPAAPARSMGSGKVAAAAGIGALIYVAVISWWHEITRFVSNLF

Specific function: Unknown

COG id: COG3772

COG function: function code R; Phage-related lysozyme (muraminidase)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32236; Mature: 32236

Theoretical pI: Translated: 7.49; Mature: 7.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLSPAGAAFVRVEEGVELKFYLDSVGVGTIGIGFTWGSAAFRQWWADNKPGMTFGIGAT
CCCCCCCCEEEEECCCCEEEEEECCCCCCEEEEEEECHHHHHHHHHCCCCCCEEEECCCC
MTRNEAEKALIYCFANEYGKAVNAFLGHEVPQNVFDGMASPVYNLGTGSLGWKWAAFAKR
CCCCCHHHEEEEEEHHHHHHHHHHHHCCCCHHHHHHHHHCCHHCCCCCCCCCHHHHHHHC
GDYSACAAVLRSTGTTAKGKTLAGLVRRRREEAALIESGIYAGVGKIQAATDDPVDTAML
CCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHH
DSVLTRGERGPSVAALVSNLAALGYYKGKLDDVFGYGTEAAVLAFQRDHGLTADGYAGEI
HHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCEEEEEECCCCCCCCCCCCHH
TLAAITAALAAPKPPQTPPIGGPSQQPAAPARSMGSGKVAAAAGIGALIYVAVISWWHEI
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
TRFVSNLF
HHHHHHCC
>Mature Secondary Structure
MDLSPAGAAFVRVEEGVELKFYLDSVGVGTIGIGFTWGSAAFRQWWADNKPGMTFGIGAT
CCCCCCCCEEEEECCCCEEEEEECCCCCCEEEEEEECHHHHHHHHHCCCCCCEEEECCCC
MTRNEAEKALIYCFANEYGKAVNAFLGHEVPQNVFDGMASPVYNLGTGSLGWKWAAFAKR
CCCCCHHHEEEEEEHHHHHHHHHHHHCCCCHHHHHHHHHCCHHCCCCCCCCCHHHHHHHC
GDYSACAAVLRSTGTTAKGKTLAGLVRRRREEAALIESGIYAGVGKIQAATDDPVDTAML
CCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHH
DSVLTRGERGPSVAALVSNLAALGYYKGKLDDVFGYGTEAAVLAFQRDHGLTADGYAGEI
HHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCEEEEEECCCCCCCCCCCCHH
TLAAITAALAAPKPPQTPPIGGPSQQPAAPARSMGSGKVAAAAGIGALIYVAVISWWHEI
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
TRFVSNLF
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA