| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13470592
Identifier: 13470592
GI number: 13470592
Start: 241871
End: 243991
Strand: Direct
Name: 13470592
Synonym: mlr0347
Alternate gene names: NA
Gene position: 241871-243991 (Clockwise)
Preceding gene: 13470591
Following gene: 13470594
Centisome position: 3.44
GC content: 64.21
Gene sequence:
>2121_bases GTGGATCCATGCCGAGGCCGGCAGCCGGTTTGGTGCGGGGCTGATTGCCGAGGATCTGCCTCTGGCACTGGTACCCGTGT TGCGCGAACTGGTCGAAGCACGTCGCAAGGTGCCCGTCGAATGAAGCGTTTCGCGCTCGCCGTTGCGGCCGTCATCGCGC TGTTCGCATCGCATGGCGTGCGCGCCGAGCAGCCGGTGACCGTCGTCGATGATCCAGCGGTTCTCGCCACCCTCGATGCC AAGGGTTTTGGCTTTGCCGGCATTTTCGGCGCCGATGGCGCGGACGATCTGAAGACGCTCTATGCCAAGGCGCCGGCCTA TCATGCGATCGTCGACACGGTGGCATCAGACATTGCCACGCTGCGCGCCGAGATGAAGGCCGGCGGGCGCACGCTCTACG AGGTGACCGACGGCAATGTCGGTCGCATCATGGATATGCGCTGGCTGAAGACGGAGGCGGCGCGCTTCCGGCTGGTCGGC GTCGTCAACCGGCTCGACCGGCGTGATTTCGCTGCCTTGGAGGGTGACAAGAGCTGCGGCGAGGTGCGCTTCATCTATCG CCTGGCGTACAGTTTCACGAAGGACGGCAAGGTCCTGGCCTCGCGGCTGCCATTCAACTTCAATGCCGTCTACAGCGCGG CACCCGATGCCGATGGCGGCTGTGTCGGCGTTTCCGGACGCTGGACACCGCAGTTGGATGAGGGCGTCGATGCCGGCTGG CTGACTGGCGGGCCGCTGGAGCGGGCCGGGCTGACCTTCAAGCAGCTTGAACTCAATGCGCAAGTCGTGCGCTTTCCCTC CGGCCAGGAGACCGAATTCGGCGGGCAGGCCGCTTATCTCATGCGGATATTCGGCATCGATGGCGCCGCCGTCGGCGAGA AGCCGCTGGAAAATACGCCGGACACCGCACGGCTCTCGCAAGACGCGGCGCTCAGGAAAAGCCTCGCCGATTATGTCAGC GCCAATGTCGCCTCCGTCGATGTCGGCGTCTACGAACTCCCCAACGAATTTCTGGCGAAGAAGGTCATCTCGTGGTCAAC CTTCGGCAGCGCAAGACAGGCCAACCATCCGTTCTCGCAAATATTCCAACCCAACGAATTCGTATCGCTCGATTATTCCT CGCTGAAGCTGGTGCGCACGCCCGAGGGGCTGGTCGAGCGGCTGGACAATGGTTCCTGCCAGGGCTGTCACCAGGCGGGT TCCACGGCCGGCTTCCACTTCATCGGCCTCGACGACAGGACGACATCGCCGCTCAACCGCATCGAGGTCGGCATCTCGCC GCATCTCCATGCCGAGATTCCCCGGCGCCAGGCCTGGCTGCGTGCAACGCAGGAAGGCAAGGAGCCGAACCGCTATCGGC CGCTGTCCTTCGCGCCGCCCGCCACCTGGACCGAGACCGGCGACATCGACTATGCGCCGGCGAAAATGGCGATGCCGTGC CTGATGCCGGAGGATGCCAAGCGTTTCGGCGCGACCTGGCAATGCGGTGGCGGCACGGTCTGCACGCCGCTGGCGACAGC ATCTGATGTGCGTATCACTCTGGCGCAATGTCTGCTGCCGAAGGACAGTGAAAAGATGTTCTCCGGCCATCCCTGTCTGA CGGGTTCGATCGCCAGCAACCCGTCGCAGCCTTTCAACGATCGCTACAAGATCACCGGCCAGTTCGCCGCCTTCGCGCCG GGGATTTCGCGGACCGCCTATACCTGCCGGCCGCCCAAGATCGGCGTGCCGGCGGGCATTGCCTACCGTGCCTGCGACGA TAAGGATCGCAACTTCGCCGCCTTCAAGAAGGGCAAGCCGATGCCGAACGAAATCTGCGGGCTGGTCGGCGGCAAGAAAT TCGACACTTGCGTGGCGACCAACAATTTCGACCAGTGCCTCGGCGGTGCGGTCAATCGCGGCAACCGACCGGCCTGCTCG GCCGATCATTTCTGCCGCGAGGATTACATGTGCCAGTCGCTGCCGCCGGACACGCCGGGCGACGCTAAAGTGAAAGGCAT CGGCTTCTGCTCGCCGACCTATTTCATCTTCCAGATGCGTATCGACAACCACGCGACACCCTGGGCGAGCGCTACCAGCG CGCCCAGGGACGCGGGGTTCGGCGCGGCCGGGGAGGAATGA
Upstream 100 bases:
>100_bases CGTGGCTTGCCACTGCCGGGTCTGGCGACGTGCTGTCCGGCATATCAGCCGGTCTGCTGGCGCAAGCCATGCCGGCGTTC GAAGCGGCCTGCGCGGCGGT
Downstream 100 bases:
>100_bases GTGTTCGGCGGCTACCTCAGGCAGAGACCTATCGGTCGCCTCACAGCGGGATGTTGTCGTGCTTCTTCCAGGGGTTCTGC ATGTCCTTGTTGCGCAGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 706; Mature: 706
Protein sequence:
>706_residues MDPCRGRQPVWCGADCRGSASGTGTRVARTGRSTSQGARRMKRFALAVAAVIALFASHGVRAEQPVTVVDDPAVLATLDA KGFGFAGIFGADGADDLKTLYAKAPAYHAIVDTVASDIATLRAEMKAGGRTLYEVTDGNVGRIMDMRWLKTEAARFRLVG VVNRLDRRDFAALEGDKSCGEVRFIYRLAYSFTKDGKVLASRLPFNFNAVYSAAPDADGGCVGVSGRWTPQLDEGVDAGW LTGGPLERAGLTFKQLELNAQVVRFPSGQETEFGGQAAYLMRIFGIDGAAVGEKPLENTPDTARLSQDAALRKSLADYVS ANVASVDVGVYELPNEFLAKKVISWSTFGSARQANHPFSQIFQPNEFVSLDYSSLKLVRTPEGLVERLDNGSCQGCHQAG STAGFHFIGLDDRTTSPLNRIEVGISPHLHAEIPRRQAWLRATQEGKEPNRYRPLSFAPPATWTETGDIDYAPAKMAMPC LMPEDAKRFGATWQCGGGTVCTPLATASDVRITLAQCLLPKDSEKMFSGHPCLTGSIASNPSQPFNDRYKITGQFAAFAP GISRTAYTCRPPKIGVPAGIAYRACDDKDRNFAAFKKGKPMPNEICGLVGGKKFDTCVATNNFDQCLGGAVNRGNRPACS ADHFCREDYMCQSLPPDTPGDAKVKGIGFCSPTYFIFQMRIDNHATPWASATSAPRDAGFGAAGEE
Sequences:
>Translated_706_residues MDPCRGRQPVWCGADCRGSASGTGTRVARTGRSTSQGARRMKRFALAVAAVIALFASHGVRAEQPVTVVDDPAVLATLDA KGFGFAGIFGADGADDLKTLYAKAPAYHAIVDTVASDIATLRAEMKAGGRTLYEVTDGNVGRIMDMRWLKTEAARFRLVG VVNRLDRRDFAALEGDKSCGEVRFIYRLAYSFTKDGKVLASRLPFNFNAVYSAAPDADGGCVGVSGRWTPQLDEGVDAGW LTGGPLERAGLTFKQLELNAQVVRFPSGQETEFGGQAAYLMRIFGIDGAAVGEKPLENTPDTARLSQDAALRKSLADYVS ANVASVDVGVYELPNEFLAKKVISWSTFGSARQANHPFSQIFQPNEFVSLDYSSLKLVRTPEGLVERLDNGSCQGCHQAG STAGFHFIGLDDRTTSPLNRIEVGISPHLHAEIPRRQAWLRATQEGKEPNRYRPLSFAPPATWTETGDIDYAPAKMAMPC LMPEDAKRFGATWQCGGGTVCTPLATASDVRITLAQCLLPKDSEKMFSGHPCLTGSIASNPSQPFNDRYKITGQFAAFAP GISRTAYTCRPPKIGVPAGIAYRACDDKDRNFAAFKKGKPMPNEICGLVGGKKFDTCVATNNFDQCLGGAVNRGNRPACS ADHFCREDYMCQSLPPDTPGDAKVKGIGFCSPTYFIFQMRIDNHATPWASATSAPRDAGFGAAGEE >Mature_706_residues MDPCRGRQPVWCGADCRGSASGTGTRVARTGRSTSQGARRMKRFALAVAAVIALFASHGVRAEQPVTVVDDPAVLATLDA KGFGFAGIFGADGADDLKTLYAKAPAYHAIVDTVASDIATLRAEMKAGGRTLYEVTDGNVGRIMDMRWLKTEAARFRLVG VVNRLDRRDFAALEGDKSCGEVRFIYRLAYSFTKDGKVLASRLPFNFNAVYSAAPDADGGCVGVSGRWTPQLDEGVDAGW LTGGPLERAGLTFKQLELNAQVVRFPSGQETEFGGQAAYLMRIFGIDGAAVGEKPLENTPDTARLSQDAALRKSLADYVS ANVASVDVGVYELPNEFLAKKVISWSTFGSARQANHPFSQIFQPNEFVSLDYSSLKLVRTPEGLVERLDNGSCQGCHQAG STAGFHFIGLDDRTTSPLNRIEVGISPHLHAEIPRRQAWLRATQEGKEPNRYRPLSFAPPATWTETGDIDYAPAKMAMPC LMPEDAKRFGATWQCGGGTVCTPLATASDVRITLAQCLLPKDSEKMFSGHPCLTGSIASNPSQPFNDRYKITGQFAAFAP GISRTAYTCRPPKIGVPAGIAYRACDDKDRNFAAFKKGKPMPNEICGLVGGKKFDTCVATNNFDQCLGGAVNRGNRPACS ADHFCREDYMCQSLPPDTPGDAKVKGIGFCSPTYFIFQMRIDNHATPWASATSAPRDAGFGAAGEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 75970; Mature: 75970
Theoretical pI: Translated: 7.99; Mature: 7.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDPCRGRQPVWCGADCRGSASGTGTRVARTGRSTSQGARRMKRFALAVAAVIALFASHGV CCCCCCCCCEEECCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC RAEQPVTVVDDPAVLATLDAKGFGFAGIFGADGADDLKTLYAKAPAYHAIVDTVASDIAT CCCCCEEEECCCEEEEEECCCCCCEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHH LRAEMKAGGRTLYEVTDGNVGRIMDMRWLKTEAARFRLVGVVNRLDRRDFAALEGDKSCG HHHHHHCCCCEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCC EVRFIYRLAYSFTKDGKVLASRLPFNFNAVYSAAPDADGGCVGVSGRWTPQLDEGVDAGW HHHHHHHHHHHHCCCCHHHHHHCCCCCCEEEECCCCCCCCEEECCCCCCCCHHCCCCCCC LTGGPLERAGLTFKQLELNAQVVRFPSGQETEFGGQAAYLMRIFGIDGAAVGEKPLENTP CCCCCHHHHCCEEEEEECCEEEEECCCCCCCCCCCHHEEEEHEECCCCCCCCCCCCCCCC DTARLSQDAALRKSLADYVSANVASVDVGVYELPNEFLAKKVISWSTFGSARQANHPFSQ CHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHCCHHHHHHHHHHHHCCCCCCCCCCCHHH IFQPNEFVSLDYSSLKLVRTPEGLVERLDNGSCQGCHQAGSTAGFHFIGLDDRTTSPLNR HCCCCCEEEECCCCEEEEECCHHHHHHHCCCCCCCHHHCCCCCCEEEEECCCCCCCCHHH IEVGISPHLHAEIPRRQAWLRATQEGKEPNRYRPLSFAPPATWTETGDIDYAPAKMAMPC EEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCC LMPEDAKRFGATWQCGGGTVCTPLATASDVRITLAQCLLPKDSEKMFSGHPCLTGSIASN CCCHHHHHCCCEEECCCCCEECCCCCCCCHHHHHHHHHCCCCCHHHHCCCCCEECCCCCC PSQPFNDRYKITGQFAAFAPGISRTAYTCRPPKIGVPAGIAYRACDDKDRNFAAFKKGKP CCCCCCCCEEEEEEHHHHCCCCCCCEEECCCCCCCCCCCEEEECCCCCCCCEEHHHCCCC MPNEICGLVGGKKFDTCVATNNFDQCLGGAVNRGNRPACSADHFCREDYMCQSLPPDTPG CHHHHHHHCCCCCCCEEEECCCHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHCCCCCCCC DAKVKGIGFCSPTYFIFQMRIDNHATPWASATSAPRDAGFGAAGEE CCEEEEEEECCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MDPCRGRQPVWCGADCRGSASGTGTRVARTGRSTSQGARRMKRFALAVAAVIALFASHGV CCCCCCCCCEEECCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC RAEQPVTVVDDPAVLATLDAKGFGFAGIFGADGADDLKTLYAKAPAYHAIVDTVASDIAT CCCCCEEEECCCEEEEEECCCCCCEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHH LRAEMKAGGRTLYEVTDGNVGRIMDMRWLKTEAARFRLVGVVNRLDRRDFAALEGDKSCG HHHHHHCCCCEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCC EVRFIYRLAYSFTKDGKVLASRLPFNFNAVYSAAPDADGGCVGVSGRWTPQLDEGVDAGW HHHHHHHHHHHHCCCCHHHHHHCCCCCCEEEECCCCCCCCEEECCCCCCCCHHCCCCCCC LTGGPLERAGLTFKQLELNAQVVRFPSGQETEFGGQAAYLMRIFGIDGAAVGEKPLENTP CCCCCHHHHCCEEEEEECCEEEEECCCCCCCCCCCHHEEEEHEECCCCCCCCCCCCCCCC DTARLSQDAALRKSLADYVSANVASVDVGVYELPNEFLAKKVISWSTFGSARQANHPFSQ CHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHCCHHHHHHHHHHHHCCCCCCCCCCCHHH IFQPNEFVSLDYSSLKLVRTPEGLVERLDNGSCQGCHQAGSTAGFHFIGLDDRTTSPLNR HCCCCCEEEECCCCEEEEECCHHHHHHHCCCCCCCHHHCCCCCCEEEEECCCCCCCCHHH IEVGISPHLHAEIPRRQAWLRATQEGKEPNRYRPLSFAPPATWTETGDIDYAPAKMAMPC EEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCC LMPEDAKRFGATWQCGGGTVCTPLATASDVRITLAQCLLPKDSEKMFSGHPCLTGSIASN CCCHHHHHCCCEEECCCCCEECCCCCCCCHHHHHHHHHCCCCCHHHHCCCCCEECCCCCC PSQPFNDRYKITGQFAAFAPGISRTAYTCRPPKIGVPAGIAYRACDDKDRNFAAFKKGKP CCCCCCCCEEEEEEHHHHCCCCCCCEEECCCCCCCCCCCEEEECCCCCCCCEEHHHCCCC MPNEICGLVGGKKFDTCVATNNFDQCLGGAVNRGNRPACSADHFCREDYMCQSLPPDTPG CHHHHHHHCCCCCCCEEEECCCHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHCCCCCCCC DAKVKGIGFCSPTYFIFQMRIDNHATPWASATSAPRDAGFGAAGEE CCEEEEEEECCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA