| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is sam [H]
Identifier: 13470530
GI number: 13470530
Start: 183915
End: 184802
Strand: Reverse
Name: sam [H]
Synonym: mll0262
Alternate gene names: 13470530
Gene position: 184802-183915 (Counterclockwise)
Preceding gene: 13470545
Following gene: 13470529
Centisome position: 2.63
GC content: 64.75
Gene sequence:
>888_bases ATGCATTTCATCCCTGCCTCGATCCGCGGCCCGCTGTTCATGATCGTTTCGACCGGCTCGTACCTGGTCAACGACACGAT GATGAAACTCGCGACCGCGGGGCTGCCGTCCTACGAGGTGCTGTTCCTGCGCGGTGTGGCGGCAGCGCTCTGGGGCTTCC CGCTGTTGTTCCTGCTGGGCTACGGCAAACAGATCCCGCTGATCTTCGACGGCCATGTGCTGCGCAGGAACCTGCTCGAG CTGGCGGCGATCCTTTGCTATGTCGTGGCGCTCGCCAACATGCAGATCGCGGATTCAACCGCGCTCGGACAAATCACGCC GCTGCTGATGCTGGTCGGTTCCTCGATCCTGTTTGGCGAGCGCATCGGCGGCCAGCGCATGGCGCTGATCGGGCTCGGCT TCATCGGCGCGTTGATGGTGGCGCAGCCGACCATGCAAGGCATTTCGGTCTATGCGCTGCTGGCGCTCGGCAATGCCGCG CTGTCAGCCGCGCGCGACCTTGCCGGCAGACGTGTTTCTGCAGAGGTGCCGGGGATGATCGTGGCGATCTCCGCCGTCGT GGTGGTGCTGATCGGAGCGGGTGCGGCGCATCTGGTTTCCGAGCGCTGGGTGATGCCCGAGGCGCGCCATTTGCTGCTGA TGGCCGGCGCCGGGTTTTTCCTGATCTTCGGCCACTTCTTCATCTTCATGGCCTATCGCGTCGGGCCAACCAGCGCGGTG GCGCCGTTCTATTACTGCTTCACCGTCTGGGCCGTCATTTCGGGGCTGCTGGTGTTCGGCCAGTTCCCCAATGCGCTGGC GGTCTGCGGCATCCTGCTGGTGGTGGCCAGCGGGCTGACCATCGTCTCGCTGGATCAGCGCAAGCGCCGGCTGACCGTCG TCGCCTAG
Upstream 100 bases:
>100_bases CGAGGGCTGCACCCCATGTTCTTGCCGGCCAATTCCTGTCTCGATCACGGCCAGTTGATGGCCCATTGCGGCGGCCGCCG AGGTCTGATCTCCTGACCCC
Downstream 100 bases:
>100_bases CATCGGCAGCCGAGCGCCTGTGTCCAATGTTGCGGAGGCCAGATCGATCGTCTATTCGGCGATGTATCGTCTATCCACGA CGCCATGATCAATCAGCCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 295; Mature: 295
Protein sequence:
>295_residues MHFIPASIRGPLFMIVSTGSYLVNDTMMKLATAGLPSYEVLFLRGVAAALWGFPLLFLLGYGKQIPLIFDGHVLRRNLLE LAAILCYVVALANMQIADSTALGQITPLLMLVGSSILFGERIGGQRMALIGLGFIGALMVAQPTMQGISVYALLALGNAA LSAARDLAGRRVSAEVPGMIVAISAVVVVLIGAGAAHLVSERWVMPEARHLLLMAGAGFFLIFGHFFIFMAYRVGPTSAV APFYYCFTVWAVISGLLVFGQFPNALAVCGILLVVASGLTIVSLDQRKRRLTVVA
Sequences:
>Translated_295_residues MHFIPASIRGPLFMIVSTGSYLVNDTMMKLATAGLPSYEVLFLRGVAAALWGFPLLFLLGYGKQIPLIFDGHVLRRNLLE LAAILCYVVALANMQIADSTALGQITPLLMLVGSSILFGERIGGQRMALIGLGFIGALMVAQPTMQGISVYALLALGNAA LSAARDLAGRRVSAEVPGMIVAISAVVVVLIGAGAAHLVSERWVMPEARHLLLMAGAGFFLIFGHFFIFMAYRVGPTSAV APFYYCFTVWAVISGLLVFGQFPNALAVCGILLVVASGLTIVSLDQRKRRLTVVA >Mature_295_residues MHFIPASIRGPLFMIVSTGSYLVNDTMMKLATAGLPSYEVLFLRGVAAALWGFPLLFLLGYGKQIPLIFDGHVLRRNLLE LAAILCYVVALANMQIADSTALGQITPLLMLVGSSILFGERIGGQRMALIGLGFIGALMVAQPTMQGISVYALLALGNAA LSAARDLAGRRVSAEVPGMIVAISAVVVVLIGAGAAHLVSERWVMPEARHLLLMAGAGFFLIFGHFFIFMAYRVGPTSAV APFYYCFTVWAVISGLLVFGQFPNALAVCGILLVVASGLTIVSLDQRKRRLTVVA
Specific function: Transports S-adenosylmethionine [H]
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the drug/metabolite transporter (DMT) superfamily. 10 TMS drug/metabolite exporter (TC 2.A.7.3) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 31401; Mature: 31401
Theoretical pI: Translated: 9.84; Mature: 9.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHFIPASIRGPLFMIVSTGSYLVNDTMMKLATAGLPSYEVLFLRGVAAALWGFPLLFLLG CCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHC YGKQIPLIFDGHVLRRNLLELAAILCYVVALANMQIADSTALGQITPLLMLVGSSILFGE CCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHH RIGGQRMALIGLGFIGALMVAQPTMQGISVYALLALGNAALSAARDLAGRRVSAEVPGMI HCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH VAISAVVVVLIGAGAAHLVSERWVMPEARHLLLMAGAGFFLIFGHFFIFMAYRVGPTSAV HHHHHHHHHHHCCCHHHHHHHHCCCCHHHHEEEEECCHHHHHHHHHHHHHHHHCCCCHHH APFYYCFTVWAVISGLLVFGQFPNALAVCGILLVVASGLTIVSLDQRKRRLTVVA HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEECCCCCEEEECC >Mature Secondary Structure MHFIPASIRGPLFMIVSTGSYLVNDTMMKLATAGLPSYEVLFLRGVAAALWGFPLLFLLG CCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHC YGKQIPLIFDGHVLRRNLLELAAILCYVVALANMQIADSTALGQITPLLMLVGSSILFGE CCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHH RIGGQRMALIGLGFIGALMVAQPTMQGISVYALLALGNAALSAARDLAGRRVSAEVPGMI HCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH VAISAVVVVLIGAGAAHLVSERWVMPEARHLLLMAGAGFFLIFGHFFIFMAYRVGPTSAV HHHHHHHHHHHCCCHHHHHHHHCCCCHHHHEEEEECCHHHHHHHHHHHHHHHHCCCCHHH APFYYCFTVWAVISGLLVFGQFPNALAVCGILLVVASGLTIVSLDQRKRRLTVVA HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEECCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA