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The map label for this gene is yfgC [H]

Identifier: 13470487

GI number: 13470487

Start: 140932

End: 142386

Strand: Reverse

Name: yfgC [H]

Synonym: mll0209

Alternate gene names: 13470487

Gene position: 142386-140932 (Counterclockwise)

Preceding gene: 13470490

Following gene: 13470486

Centisome position: 2.02

GC content: 63.23

Gene sequence:

>1455_bases
TTGAGGAAGTTTTCCGGTGCCGACTTTTCATCTTTCGCCCGCTCGTCTACCAGTGAACACGTCATGTTGAGCCGACCCAG
ATCGACGATTGCCAGGATCGCGCGTGTTTTCACGACGCTTTCGCTCGGCCTTGCCGTTGCCGTGGCAAGTTCGGTCACCG
CCTTCGCCCAGAGCGTTCCGGTGGTGCGCGATGCCGAGATCGAGGCTTTGGTGCGCGACTATGCACGGCCGATCTTCAAG
GCAGCCGGGCTGGCGAATGACGGCATCGACATCGTGCTGGTCAATGATTCCAGCTTCAACGCTTTTGTCACCGGGCGACG
GCTGTTCATCAACACCGGCGCGCTGATGACGGCGGAAACGCCCAACGAGATCATCGGCGTCATCGCGCACGAGGCCGGCC
ATATCGCCGGCGGCCACCAGCAGAAACTGCGTGACCAGCTCGAGCGCGCCAAGACGATGGCCATCATTGCGACCTTGCTT
GGCGCGGGCGCGATCGTCGCTGGCGCGACCACCAACAGCCGCGGCCTTGCCGGCGCCGGCATGGGCGTGGCCGCCGGCGG
CGGCGAGATGGCACAGCGCAGCATCCTCGCCTATCAGCGCACCGAGGAGATAACGGCCGACCGCTCCGCCATCACCTATC
TCAACGCCACCGGCCAGTCCGGCATGGGCATGCTGAAGACGTTCCGGAGGTTCCAGACCGCGCTGTCGCTGTCGGGTGCG
CAAGTCGATCCCTATCGGATCAGCCATCCGATGCCGCAGGAGCGCATCGCCAATCTCGAAGTGCTGGTGAAGCAGAGCCC
CAATGTCGACAAGCTCGACCCGCCGACGCTGCAGCAGCGCCATGACATGATGCGGGTGAAGATCGCCGTCTACATGGAAG
GCCAGGCCGCCGCGGCGCGGCTGCTGCAAAAGATGAGAGGCAGCCTCGCCGCGCAGTATGGCGACGCCCAATCGACCTAC
CTTTACGGCGACATCGCCGGCGCACTCGCCAAGACCAATGCCCTGATCAAGGCGCAGCCGAAGAATGCCTATTTCCAGGA
GTTGCGCGGCGACATCTTGATGAAGGCGAACAAGCCCAAGGACGCGGCGGAAGCCTACGCCAAGGCGGTCAGCCTCGATC
CGGCGCGGTCCGGCTTGCTGCCTGTCTCGCTCGGCCAGGCGCTGATGGCGGTCGGCACGCCAGACTCGCTGAAGAAAGCC
GTCGTGCAGATCAACAATGGCCTGGGCCGCGACAAGGAAAATTCCGAAGGCTATCGCTACCTGGCCCAGGCTTACGGCGA
GCTGGGTGACATACCGGGCGCCGAGCTGGCCACGGCGGAAGGTCATTTCTATTCCGGTAACTACAAGGATGCGAAGATCT
TCGCCATGCGGGCGCAGCAGCAGATGAAGCGCGGCGAGCCGCGCTGGATACGCGCCCAGGACATCATAAACTACAAATCG
TCAAACAAGATCTAG

Upstream 100 bases:

>100_bases
AGAGCGAAACGACCATTTTATCCCTATCCCGACGGTTGGGCGCGCCACGCCCCCGAATACATGCGCCGCACAAATGCCCG
ATTGATGTGAGGATCACAAG

Downstream 100 bases:

>100_bases
TGAACCTTCCGGTCACGCACTGCGACACAGCCGGACCAGGAAACAGGCAAAAGGAACGAAAACGATGAAAAAGGCACTGC
TGCTGGGCACCACGGGGGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 484; Mature: 484

Protein sequence:

>484_residues
MRKFSGADFSSFARSSTSEHVMLSRPRSTIARIARVFTTLSLGLAVAVASSVTAFAQSVPVVRDAEIEALVRDYARPIFK
AAGLANDGIDIVLVNDSSFNAFVTGRRLFINTGALMTAETPNEIIGVIAHEAGHIAGGHQQKLRDQLERAKTMAIIATLL
GAGAIVAGATTNSRGLAGAGMGVAAGGGEMAQRSILAYQRTEEITADRSAITYLNATGQSGMGMLKTFRRFQTALSLSGA
QVDPYRISHPMPQERIANLEVLVKQSPNVDKLDPPTLQQRHDMMRVKIAVYMEGQAAAARLLQKMRGSLAAQYGDAQSTY
LYGDIAGALAKTNALIKAQPKNAYFQELRGDILMKANKPKDAAEAYAKAVSLDPARSGLLPVSLGQALMAVGTPDSLKKA
VVQINNGLGRDKENSEGYRYLAQAYGELGDIPGAELATAEGHFYSGNYKDAKIFAMRAQQQMKRGEPRWIRAQDIINYKS
SNKI

Sequences:

>Translated_484_residues
MRKFSGADFSSFARSSTSEHVMLSRPRSTIARIARVFTTLSLGLAVAVASSVTAFAQSVPVVRDAEIEALVRDYARPIFK
AAGLANDGIDIVLVNDSSFNAFVTGRRLFINTGALMTAETPNEIIGVIAHEAGHIAGGHQQKLRDQLERAKTMAIIATLL
GAGAIVAGATTNSRGLAGAGMGVAAGGGEMAQRSILAYQRTEEITADRSAITYLNATGQSGMGMLKTFRRFQTALSLSGA
QVDPYRISHPMPQERIANLEVLVKQSPNVDKLDPPTLQQRHDMMRVKIAVYMEGQAAAARLLQKMRGSLAAQYGDAQSTY
LYGDIAGALAKTNALIKAQPKNAYFQELRGDILMKANKPKDAAEAYAKAVSLDPARSGLLPVSLGQALMAVGTPDSLKKA
VVQINNGLGRDKENSEGYRYLAQAYGELGDIPGAELATAEGHFYSGNYKDAKIFAMRAQQQMKRGEPRWIRAQDIINYKS
SNKI
>Mature_484_residues
MRKFSGADFSSFARSSTSEHVMLSRPRSTIARIARVFTTLSLGLAVAVASSVTAFAQSVPVVRDAEIEALVRDYARPIFK
AAGLANDGIDIVLVNDSSFNAFVTGRRLFINTGALMTAETPNEIIGVIAHEAGHIAGGHQQKLRDQLERAKTMAIIATLL
GAGAIVAGATTNSRGLAGAGMGVAAGGGEMAQRSILAYQRTEEITADRSAITYLNATGQSGMGMLKTFRRFQTALSLSGA
QVDPYRISHPMPQERIANLEVLVKQSPNVDKLDPPTLQQRHDMMRVKIAVYMEGQAAAARLLQKMRGSLAAQYGDAQSTY
LYGDIAGALAKTNALIKAQPKNAYFQELRGDILMKANKPKDAAEAYAKAVSLDPARSGLLPVSLGQALMAVGTPDSLKKA
VVQINNGLGRDKENSEGYRYLAQAYGELGDIPGAELATAEGHFYSGNYKDAKIFAMRAQQQMKRGEPRWIRAQDIINYKS
SNKI

Specific function: Unknown

COG id: COG4783

COG function: function code R; Putative Zn-dependent protease, contains TPR repeats

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 4 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI1788840, Length=441, Percent_Identity=23.5827664399093, Blast_Score=78, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915
- InterPro:   IPR011990 [H]

Pfam domain/function: PF01435 Peptidase_M48 [H]

EC number: NA

Molecular weight: Translated: 51986; Mature: 51986

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKFSGADFSSFARSSTSEHVMLSRPRSTIARIARVFTTLSLGLAVAVASSVTAFAQSVP
CCCCCCCCHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
VVRDAEIEALVRDYARPIFKAAGLANDGIDIVLVNDSSFNAFVTGRRLFINTGALMTAET
CCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEECCEEEEECCEEEECCC
PNEIIGVIAHEAGHIAGGHQQKLRDQLERAKTMAIIATLLGAGAIVAGATTNSRGLAGAG
CHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCC
MGVAAGGGEMAQRSILAYQRTEEITADRSAITYLNATGQSGMGMLKTFRRFQTALSLSGA
CCEECCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCC
QVDPYRISHPMPQERIANLEVLVKQSPNVDKLDPPTLQQRHDMMRVKIAVYMEGQAAAAR
CCCCEECCCCCCHHHHCCEEEEEECCCCCCCCCCCHHHHHHHHEEEEEEEEECCHHHHHH
LLQKMRGSLAAQYGDAQSTYLYGDIAGALAKTNALIKAQPKNAYFQELRGDILMKANKPK
HHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHCCCEEEECCCHHHHHHHCCCEEEECCCCH
DAAEAYAKAVSLDPARSGLLPVSLGQALMAVGTPDSLKKAVVQINNGLGRDKENSEGYRY
HHHHHHHHHHCCCCHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHH
LAQAYGELGDIPGAELATAEGHFYSGNYKDAKIFAMRAQQQMKRGEPRWIRAQDIINYKS
HHHHHHHHCCCCCCCEEECCCCEECCCCCCHHHHHHHHHHHHHCCCCCEEEHHHHHCCCC
SNKI
CCCC
>Mature Secondary Structure
MRKFSGADFSSFARSSTSEHVMLSRPRSTIARIARVFTTLSLGLAVAVASSVTAFAQSVP
CCCCCCCCHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
VVRDAEIEALVRDYARPIFKAAGLANDGIDIVLVNDSSFNAFVTGRRLFINTGALMTAET
CCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEECCEEEEECCEEEECCC
PNEIIGVIAHEAGHIAGGHQQKLRDQLERAKTMAIIATLLGAGAIVAGATTNSRGLAGAG
CHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCC
MGVAAGGGEMAQRSILAYQRTEEITADRSAITYLNATGQSGMGMLKTFRRFQTALSLSGA
CCEECCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCC
QVDPYRISHPMPQERIANLEVLVKQSPNVDKLDPPTLQQRHDMMRVKIAVYMEGQAAAAR
CCCCEECCCCCCHHHHCCEEEEEECCCCCCCCCCCHHHHHHHHEEEEEEEEECCHHHHHH
LLQKMRGSLAAQYGDAQSTYLYGDIAGALAKTNALIKAQPKNAYFQELRGDILMKANKPK
HHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHCCCEEEECCCHHHHHHHCCCEEEECCCCH
DAAEAYAKAVSLDPARSGLLPVSLGQALMAVGTPDSLKKAVVQINNGLGRDKENSEGYRY
HHHHHHHHHHCCCCHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHH
LAQAYGELGDIPGAELATAEGHFYSGNYKDAKIFAMRAQQQMKRGEPRWIRAQDIINYKS
HHHHHHHHCCCCCCCEEECCCCEECCCCCCHHHHHHHHHHHHHCCCCCEEEHHHHHCCCC
SNKI
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]