Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

Click here to switch to the map view.

The map label for this gene is 13470478

Identifier: 13470478

GI number: 13470478

Start: 134982

End: 135221

Strand: Direct

Name: 13470478

Synonym: msr8581

Alternate gene names: NA

Gene position: 134982-135221 (Clockwise)

Preceding gene: 13470475

Following gene: 13470479

Centisome position: 1.92

GC content: 65.0

Gene sequence:

>240_bases
ATGGCCATGCAGGACCATGGAGACGCTGTCGCCGACCAGAAGCAGGTCGACATGCGGGTCGAGCAGGCGGGCGACGGGAT
AGGTGTAGGCGGTCAGGCAGACCAACGGGACGCCGCCCTTACGGCGGCGAATCAGCTCCGCGCCGATGCGAATGTCGGTG
GTCGGCAGTTTCGTGGCCAATCGTCACCTCCCTCGGCCCATGGCTGGATTGGATATCCGCATGGGCGCGCTGAGCTTTAG

Upstream 100 bases:

>100_bases
CGGCCGGCATATCGACGACCACGCAGGCCCTGGCCGAGCCGCGCATCACCGCTTGCCCATGCGCGATCATCATCCCCAGC
GAGGCGCCGAGCGTCGTCGC

Downstream 100 bases:

>100_bases
AAAGAGCGCAAAGGCTTGGCAAGCGCACATCCTGTCGCCTCTGCGGATCGCAGGCCTGTGTCGGCACCCCGGCGCGCCAT
TTGCGCGCTCCCCGTGGCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 79; Mature: 78

Protein sequence:

>79_residues
MAMQDHGDAVADQKQVDMRVEQAGDGIGVGGQADQRDAALTAANQLRADANVGGRQFRGQSSPPSAHGWIGYPHGRAEL

Sequences:

>Translated_79_residues
MAMQDHGDAVADQKQVDMRVEQAGDGIGVGGQADQRDAALTAANQLRADANVGGRQFRGQSSPPSAHGWIGYPHGRAEL
>Mature_78_residues
AMQDHGDAVADQKQVDMRVEQAGDGIGVGGQADQRDAALTAANQLRADANVGGRQFRGQSSPPSAHGWIGYPHGRAEL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8269; Mature: 8138

Theoretical pI: Translated: 5.51; Mature: 5.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMQDHGDAVADQKQVDMRVEQAGDGIGVGGQADQRDAALTAANQLRADANVGGRQFRGQ
CCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC
SSPPSAHGWIGYPHGRAEL
CCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AMQDHGDAVADQKQVDMRVEQAGDGIGVGGQADQRDAALTAANQLRADANVGGRQFRGQ
CCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC
SSPPSAHGWIGYPHGRAEL
CCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA