Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

Click here to switch to the map view.

The map label for this gene is 13470439

Identifier: 13470439

GI number: 13470439

Start: 103311

End: 103550

Strand: Reverse

Name: 13470439

Synonym: msl0146

Alternate gene names: NA

Gene position: 103550-103311 (Counterclockwise)

Preceding gene: 13470440

Following gene: 13470436

Centisome position: 1.47

GC content: 62.5

Gene sequence:

>240_bases
ATGGCGAAGCTGACTTACAAGATCGTCGAGCATGACGGCGGCTGGGCCTATAAGGTCGGTTCGACCTTCTCGGAGACATT
TCCCACCCATCAGGATGCGTTGCGCGCCGCCGAGATCGCCTCGGCCGAGCAGCAGGTGGCAGGCGCGACGGACGGTATCC
AATATGAGGATGCCGACGGCAAATGGCACGAGGAACTGGCCGATGGCCGCGACCGGCCGCAGACCGAAGTGTCCGAATAG

Upstream 100 bases:

>100_bases
TGATCGAGGCCGCCAGGGAATCGGAAGTGCTGGTGCCCGACGACAAGCTATCCGACGACCGGCTGCATTGAGCAGGCGGA
CCTTTCAACCGGAGGTTTTT

Downstream 100 bases:

>100_bases
ACTTTCCGAAGAAGAGAACTTGCCAACAGACTGAGGCAGGGCGCCGGCCGCGGACGTCAGGAGAGACGACGTCCCACGGT
CGACGGCTGCCCGGTGGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 79; Mature: 78

Protein sequence:

>79_residues
MAKLTYKIVEHDGGWAYKVGSTFSETFPTHQDALRAAEIASAEQQVAGATDGIQYEDADGKWHEELADGRDRPQTEVSE

Sequences:

>Translated_79_residues
MAKLTYKIVEHDGGWAYKVGSTFSETFPTHQDALRAAEIASAEQQVAGATDGIQYEDADGKWHEELADGRDRPQTEVSE
>Mature_78_residues
AKLTYKIVEHDGGWAYKVGSTFSETFPTHQDALRAAEIASAEQQVAGATDGIQYEDADGKWHEELADGRDRPQTEVSE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8712; Mature: 8581

Theoretical pI: Translated: 4.26; Mature: 4.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKLTYKIVEHDGGWAYKVGSTFSETFPTHQDALRAAEIASAEQQVAGATDGIQYEDADG
CCCEEEEEEECCCCEEEECCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEECCCC
KWHEELADGRDRPQTEVSE
CHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
AKLTYKIVEHDGGWAYKVGSTFSETFPTHQDALRAAEIASAEQQVAGATDGIQYEDADG
CCEEEEEEECCCCEEEECCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEECCCC
KWHEELADGRDRPQTEVSE
CHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA