| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is cinA [C]
Identifier: 13470436
GI number: 13470436
Start: 100957
End: 101700
Strand: Reverse
Name: cinA [C]
Synonym: mll0144
Alternate gene names: 13470436
Gene position: 101700-100957 (Counterclockwise)
Preceding gene: 13470439
Following gene: 13470435
Centisome position: 1.45
GC content: 63.71
Gene sequence:
>744_bases ATGACCGAAATCGTTACCGCCGCCATGCTCGTCATCGGCGATGAGATTCTCTCCGGCCGCACCAAGGACAAGAATATCGG CCACCTCGCCGACATGATGACGGCCATCGGCATCGACCTGAAGGAAGTGCGCATTGTTCCCGACGAAGAAGACGAGATCA TCGCGGCGGTGAACGCCGTGCGTGCGCGCTACACCTATGTGTTCACCACCGGCGGCATCGGCCCGACCCATGACGACATC ACCGCCGATTCGGTTGCCAAGGCATTCGGCGTGCCCTGCGAATACGATGCCAAGGCCTATGCGCTGCTGGAGGCAAGCTA TGCGGCGCGCGGCATCGAATACACCGAGGCGCGCAAGCGCATGGCGCGAATGCCGCGCGGCGCCGACCTTATCGACAATC CGGTGTCCGTGGCGCCCGGCTTTCGCATCGGCAACGTCCACGTCATGGCCGGCGTGCCCTCGATCTTCCAGGCCATGCTC GACAATGTCGTGCCGACGCTGAAGACGGGCACGAAGATGCTGTCGGCGACCGTGCACTGTCCGTTCGGCGAAGGCCTTGT CGGTGGACCGTTGGGTGAGATCCAGAAAGCGCATCCGGACACGATCATCGGCTCCTATCCAAAGTATGGCGACGGCAAGT TCTGGACCGAACTGGTCGTTCGCGCCCGCAGCCAGGAAGCGCTGGACGCCGCGCGCGCCGATGTCGAGGCAATGGTGGCG GGGTTCGCCGCCAAGGCGAGCTGA
Upstream 100 bases:
>100_bases GAAACGGGCGCGTCCAGGCATGGATTGTTCACCGCCTGGCGGCATTGCCGACAGCCACGCGCCGCGCTATCTCAGGCAAC CCGTCCTGCCGGAGCCCTCC
Downstream 100 bases:
>100_bases GCGGGTCCAGGCCGGAACAAAGCGTGGCGCGCCGGCGTTGCTTTCACGCGAGTTCAAACACTCGCCAGATTGAGGGATCA CCATGCGCTTCAAGACCATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 247; Mature: 246
Protein sequence:
>247_residues MTEIVTAAMLVIGDEILSGRTKDKNIGHLADMMTAIGIDLKEVRIVPDEEDEIIAAVNAVRARYTYVFTTGGIGPTHDDI TADSVAKAFGVPCEYDAKAYALLEASYAARGIEYTEARKRMARMPRGADLIDNPVSVAPGFRIGNVHVMAGVPSIFQAML DNVVPTLKTGTKMLSATVHCPFGEGLVGGPLGEIQKAHPDTIIGSYPKYGDGKFWTELVVRARSQEALDAARADVEAMVA GFAAKAS
Sequences:
>Translated_247_residues MTEIVTAAMLVIGDEILSGRTKDKNIGHLADMMTAIGIDLKEVRIVPDEEDEIIAAVNAVRARYTYVFTTGGIGPTHDDI TADSVAKAFGVPCEYDAKAYALLEASYAARGIEYTEARKRMARMPRGADLIDNPVSVAPGFRIGNVHVMAGVPSIFQAML DNVVPTLKTGTKMLSATVHCPFGEGLVGGPLGEIQKAHPDTIIGSYPKYGDGKFWTELVVRARSQEALDAARADVEAMVA GFAAKAS >Mature_246_residues TEIVTAAMLVIGDEILSGRTKDKNIGHLADMMTAIGIDLKEVRIVPDEEDEIIAAVNAVRARYTYVFTTGGIGPTHDDIT ADSVAKAFGVPCEYDAKAYALLEASYAARGIEYTEARKRMARMPRGADLIDNPVSVAPGFRIGNVHVMAGVPSIFQAMLD NVVPTLKTGTKMLSATVHCPFGEGLVGGPLGEIQKAHPDTIIGSYPKYGDGKFWTELVVRARSQEALDAARADVEAMVAG FAAKAS
Specific function: Unknown
COG id: COG1058
COG function: function code R; Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CinA family [H]
Homologues:
Organism=Homo sapiens, GI296434309, Length=240, Percent_Identity=30.4166666666667, Blast_Score=109, Evalue=2e-24, Organism=Homo sapiens, GI41872403, Length=240, Percent_Identity=30.4166666666667, Blast_Score=109, Evalue=2e-24, Organism=Homo sapiens, GI41872389, Length=240, Percent_Identity=30.4166666666667, Blast_Score=109, Evalue=2e-24, Organism=Homo sapiens, GI296434312, Length=227, Percent_Identity=28.6343612334802, Blast_Score=92, Evalue=6e-19, Organism=Escherichia coli, GI1788583, Length=170, Percent_Identity=30, Blast_Score=79, Evalue=2e-16, Organism=Caenorhabditis elegans, GI71993974, Length=268, Percent_Identity=28.7313432835821, Blast_Score=106, Evalue=1e-23, Organism=Caenorhabditis elegans, GI71993966, Length=268, Percent_Identity=28.7313432835821, Blast_Score=105, Evalue=1e-23, Organism=Saccharomyces cerevisiae, GI6323832, Length=229, Percent_Identity=33.1877729257642, Blast_Score=114, Evalue=1e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001453 - InterPro: IPR023055 [H]
Pfam domain/function: PF00994 MoCF_biosynth [H]
EC number: NA
Molecular weight: Translated: 26330; Mature: 26198
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEIVTAAMLVIGDEILSGRTKDKNIGHLADMMTAIGIDLKEVRIVPDEEDEIIAAVNAV CCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHEEECCCCCHHHHHHHHHH RARYTYVFTTGGIGPTHDDITADSVAKAFGVPCEYDAKAYALLEASYAARGIEYTEARKR HHEEEEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHH MARMPRGADLIDNPVSVAPGFRIGNVHVMAGVPSIFQAMLDNVVPTLKTGTKMLSATVHC HHHCCCCCCCCCCCCCCCCCCEECCEEEECCCHHHHHHHHHHHHHHHHHCHHHHHEEEEC PFGEGLVGGPLGEIQKAHPDTIIGSYPKYGDGKFWTELVVRARSQEALDAARADVEAMVA CCCCCCCCCCHHHHHHCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH GFAAKAS HHHHCCC >Mature Secondary Structure TEIVTAAMLVIGDEILSGRTKDKNIGHLADMMTAIGIDLKEVRIVPDEEDEIIAAVNAV CHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHEEECCCCCHHHHHHHHHH RARYTYVFTTGGIGPTHDDITADSVAKAFGVPCEYDAKAYALLEASYAARGIEYTEARKR HHEEEEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHH MARMPRGADLIDNPVSVAPGFRIGNVHVMAGVPSIFQAMLDNVVPTLKTGTKMLSATVHC HHHCCCCCCCCCCCCCCCCCCEECCEEEECCCHHHHHHHHHHHHHHHHHCHHHHHEEEEC PFGEGLVGGPLGEIQKAHPDTIIGSYPKYGDGKFWTELVVRARSQEALDAARADVEAMVA CCCCCCCCCCHHHHHHCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH GFAAKAS HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA