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The map label for this gene is psuG

Identifier: 13470351

GI number: 13470351

Start: 21787

End: 22704

Strand: Reverse

Name: psuG

Synonym: mll0028

Alternate gene names: 13470351

Gene position: 22704-21787 (Counterclockwise)

Preceding gene: 13470352

Following gene: 13470349

Centisome position: 0.32

GC content: 65.9

Gene sequence:

>918_bases
ATGAGCCCCGAAACCGCACGCCCCTTCATCGACATCCACGCACCCGTGGCGCAAGCCCTGGCCGCCGGGCGCCCTGTCGT
GGCGCTGGAAAGCACCATCATCACCCATGGCATGCCCTACCCGGACAATGGCGCCATGGCGGCCAATGTCGAGAAGATCA
TCAGCGACGGCGGCGCCGTGCCGGCGACGATCGCCGTGATCGGTGGACGCATCAAGATCGGCCTTTCCGACGGCGAGCGC
GAATCGCTGGCCATGACCGGTGACGCCATGAAGCTGTCGCGCGCCGACCTCGGCTTCGCCGTCGCGCAAGGACGCACCGG
CGGCACGACCGTCGCCGCCACGATGATCGCGGCTGAAATGGTCGGAATAAAGGTGTTCGCCACCGGCGGCATTGGCGGCG
TGCACAAGGGCGCCGAGAAGAGTTTTGACATCTCGGCCGATCTCGACGAATTGGCGCGCACACCGGTCATCGTCGTCTCG
GCCGGCGCCAAGGCGATCCTCGACATCGAAAAGACGCTGGAAGTGCTGGAGACGCGCGGCGTGCCCGTGGTCGGCCATGG
CTGTGAGACGATGCCGGCCTTCTGGTCGCGACAGTCGCCGTTCCGCGCGCCTCTGACACTTTATAAGCCCGAAGAGATCG
CGCATTTCTTCCGGACGCGGGTCGCGCTGGGGCTCGGCGGCGGCGTGCTGGTCGCCAATCCGGTGCCGGAAAACCACGAA
ATCCCGGCTGAGGAGATGGCCGGCTACATCGAAGCCGCGCAAAAGGCCGCCGAGGCGCTCAACGTGACCGGCAAGGCGGT
GACGCCGTTCCTGCTGGGAAAAATCCTGGAGTTGACCGGCGGCCGCAGCCTCAAGACTAATATCGCGCTGGTCGAAAACA
ATGCGCGGCTGGCGGCCGAGATAGCCAAGGCCCTGTAG

Upstream 100 bases:

>100_bases
GTGCCGAACGCGCAGGAAGTGGCATGAGACCGGCAAATTCATAGTACCGCTGTGTTGCCGGGTGTGCCCCCTACGCCCGC
ACCGCGAGTTGGAGATCCAG

Downstream 100 bases:

>100_bases
TTCACTTCCCTGCGCGCCGCCCTGCCTCATAGGCGCGGCGCGCCCACACCGTCATCTCGTCGGGATCGTCAAAGGCGCTG
TCGGGAATGCTCCAATAGGG

Product: hypothetical protein

Products: NA

Alternate protein names: PsiMP glycosidase

Number of amino acids: Translated: 305; Mature: 304

Protein sequence:

>305_residues
MSPETARPFIDIHAPVAQALAAGRPVVALESTIITHGMPYPDNGAMAANVEKIISDGGAVPATIAVIGGRIKIGLSDGER
ESLAMTGDAMKLSRADLGFAVAQGRTGGTTVAATMIAAEMVGIKVFATGGIGGVHKGAEKSFDISADLDELARTPVIVVS
AGAKAILDIEKTLEVLETRGVPVVGHGCETMPAFWSRQSPFRAPLTLYKPEEIAHFFRTRVALGLGGGVLVANPVPENHE
IPAEEMAGYIEAAQKAAEALNVTGKAVTPFLLGKILELTGGRSLKTNIALVENNARLAAEIAKAL

Sequences:

>Translated_305_residues
MSPETARPFIDIHAPVAQALAAGRPVVALESTIITHGMPYPDNGAMAANVEKIISDGGAVPATIAVIGGRIKIGLSDGER
ESLAMTGDAMKLSRADLGFAVAQGRTGGTTVAATMIAAEMVGIKVFATGGIGGVHKGAEKSFDISADLDELARTPVIVVS
AGAKAILDIEKTLEVLETRGVPVVGHGCETMPAFWSRQSPFRAPLTLYKPEEIAHFFRTRVALGLGGGVLVANPVPENHE
IPAEEMAGYIEAAQKAAEALNVTGKAVTPFLLGKILELTGGRSLKTNIALVENNARLAAEIAKAL
>Mature_304_residues
SPETARPFIDIHAPVAQALAAGRPVVALESTIITHGMPYPDNGAMAANVEKIISDGGAVPATIAVIGGRIKIGLSDGERE
SLAMTGDAMKLSRADLGFAVAQGRTGGTTVAATMIAAEMVGIKVFATGGIGGVHKGAEKSFDISADLDELARTPVIVVSA
GAKAILDIEKTLEVLETRGVPVVGHGCETMPAFWSRQSPFRAPLTLYKPEEIAHFFRTRVALGLGGGVLVANPVPENHEI
PAEEMAGYIEAAQKAAEALNVTGKAVTPFLLGKILELTGGRSLKTNIALVENNARLAAEIAKAL

Specific function: Catalyzes the hydrolysis of pseudouridine 5'-phosphate (PsiMP) to ribose 5-phosphate and uracil

COG id: COG2313

COG function: function code Q; Uncharacterized enzyme involved in pigment biosynthesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pseudouridine-5'-phosphate glycosidase family

Homologues:

Organism=Escherichia coli, GI1788490, Length=304, Percent_Identity=54.9342105263158, Blast_Score=300, Evalue=1e-82,
Organism=Caenorhabditis elegans, GI25147470, Length=298, Percent_Identity=45.9731543624161, Blast_Score=265, Evalue=2e-71,
Organism=Drosophila melanogaster, GI24580669, Length=300, Percent_Identity=49, Blast_Score=265, Evalue=2e-71,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PSUG_RHILO (Q98NQ8)

Other databases:

- EMBL:   BA000012
- RefSeq:   NP_101917.1
- ProteinModelPortal:   Q98NQ8
- SMR:   Q98NQ8
- GeneID:   1224580
- GenomeReviews:   BA000012_GR
- KEGG:   mlo:mll0028
- NMPDR:   fig|266835.1.peg.22
- HOGENOM:   HBG308892
- OMA:   PATIAVM
- ProtClustDB:   CLSK862888
- HAMAP:   MF_01876
- InterPro:   IPR022830
- InterPro:   IPR007342
- PANTHER:   PTHR10584:SF1

Pfam domain/function: PF04227 Indigoidine_A; SSF110581 Indigdn_synthA

EC number: NA

Molecular weight: Translated: 31575; Mature: 31444

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPETARPFIDIHAPVAQALAAGRPVVALESTIITHGMPYPDNGAMAANVEKIISDGGAV
CCCCCCCCEEEEHHHHHHHHHCCCCEEEEEHHHHHCCCCCCCCCCCHHHHHHHHHCCCCC
PATIAVIGGRIKIGLSDGERESLAMTGDAMKLSRADLGFAVAQGRTGGTTVAATMIAAEM
CEEEEEECCEEEEECCCCCCCEEEECCCHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHH
VGIKVFATGGIGGVHKGAEKSFDISADLDELARTPVIVVSAGAKAILDIEKTLEVLETRG
HCEEEEEECCCCCCCCCCCCCCCCCCCHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCC
VPVVGHGCETMPAFWSRQSPFRAPLTLYKPEEIAHFFRTRVALGLGGGVLVANPVPENHE
CCEECCCCCCCHHHHCCCCCCCCCEEEECHHHHHHHHHHHHHHCCCCCEEEECCCCCCCC
IPAEEMAGYIEAAQKAAEALNVTGKAVTPFLLGKILELTGGRSLKTNIALVENNARLAAE
CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEEECCCHHHHH
IAKAL
HHHHC
>Mature Secondary Structure 
SPETARPFIDIHAPVAQALAAGRPVVALESTIITHGMPYPDNGAMAANVEKIISDGGAV
CCCCCCCEEEEHHHHHHHHHCCCCEEEEEHHHHHCCCCCCCCCCCHHHHHHHHHCCCCC
PATIAVIGGRIKIGLSDGERESLAMTGDAMKLSRADLGFAVAQGRTGGTTVAATMIAAEM
CEEEEEECCEEEEECCCCCCCEEEECCCHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHH
VGIKVFATGGIGGVHKGAEKSFDISADLDELARTPVIVVSAGAKAILDIEKTLEVLETRG
HCEEEEEECCCCCCCCCCCCCCCCCCCHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCC
VPVVGHGCETMPAFWSRQSPFRAPLTLYKPEEIAHFFRTRVALGLGGGVLVANPVPENHE
CCEECCCCCCCHHHHCCCCCCCCCEEEECHHHHHHHHHHHHHHCCCCCEEEECCCCCCCC
IPAEEMAGYIEAAQKAAEALNVTGKAVTPFLLGKILELTGGRSLKTNIALVENNARLAAE
CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEEECCCHHHHH
IAKAL
HHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11214968