| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13470349
Identifier: 13470349
GI number: 13470349
Start: 20875
End: 21372
Strand: Reverse
Name: 13470349
Synonym: mll0025
Alternate gene names: NA
Gene position: 21372-20875 (Counterclockwise)
Preceding gene: 13470351
Following gene: 13470341
Centisome position: 0.3
GC content: 63.45
Gene sequence:
>498_bases ATGCCGCTTCTGCTCAAGGGGTCCTGCCGCTGCAACGCCGTGCGTTTCGAGGTGGAGAGCCACACGCCCGTACCGTTCAT GCTGTGCTACTGCTCGATCTGCCGCAAGCAGCAGGGCGGCGGCGGGTTCGCCATCAATCTCGGCGCCGCCTATGAGACGC TGAACATCAGGGGCAAGAGGAGCCTTGGCGTATACCGTGCCGAGATCGAGGACGACGAGCATCCGCATTGCGAGGTCTCG ACGGGCGAGCGCAATTTCTGCCGCAAATGCGGGTCGGCGCTCTGGCTTTACGACCCGACCTGGCCGGAGTTGGTGCACCC CTTCGCCTCGGCAATCGACAGCGACCTGCCGAAGCCGCCGAGCCGGGTGCATCTGATGCTGAAATACAAGGCCAACTGGG TCGAACCCGTGATCGGCAAGGGCGACAAGACGTTCGACGTCTACCCGGAGGAATCCATCGCCGACTGGCACAAGCTGACG GGCATGTGGGTGGACTAG
Upstream 100 bases:
>100_bases TCATTGTCCATGCCGCGATCATGTCACCGGCATTTGACATTGTCATCGCGCAACCAGAACCATGCTGACAGGTTAAGACC ATTCCATCGGAGTTTTTGTC
Downstream 100 bases:
>100_bases CGTTCGTCGCCCCGTTCACGGGGCGAAGGGAGAGCCTCAGGCCGAGGCGCGTGCTTCAGCGAGCGCCTTGAGGTCGGCCG GCTTCAGTTCGACGGACTCG
Product: hypothetical protein
Products: NA
Alternate protein names: Glutathione-Dependent Formaldehyde Activating Protein
Number of amino acids: Translated: 165; Mature: 164
Protein sequence:
>165_residues MPLLLKGSCRCNAVRFEVESHTPVPFMLCYCSICRKQQGGGGFAINLGAAYETLNIRGKRSLGVYRAEIEDDEHPHCEVS TGERNFCRKCGSALWLYDPTWPELVHPFASAIDSDLPKPPSRVHLMLKYKANWVEPVIGKGDKTFDVYPEESIADWHKLT GMWVD
Sequences:
>Translated_165_residues MPLLLKGSCRCNAVRFEVESHTPVPFMLCYCSICRKQQGGGGFAINLGAAYETLNIRGKRSLGVYRAEIEDDEHPHCEVS TGERNFCRKCGSALWLYDPTWPELVHPFASAIDSDLPKPPSRVHLMLKYKANWVEPVIGKGDKTFDVYPEESIADWHKLT GMWVD >Mature_164_residues PLLLKGSCRCNAVRFEVESHTPVPFMLCYCSICRKQQGGGGFAINLGAAYETLNIRGKRSLGVYRAEIEDDEHPHCEVST GERNFCRKCGSALWLYDPTWPELVHPFASAIDSDLPKPPSRVHLMLKYKANWVEPVIGKGDKTFDVYPEESIADWHKLTG MWVD
Specific function: Unknown
COG id: COG3791
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18646; Mature: 18514
Theoretical pI: Translated: 6.76; Mature: 6.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 4.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLLLKGSCRCNAVRFEVESHTPVPFMLCYCSICRKQQGGGGFAINLGAAYETLNIRGKR CCEEECCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEECCCEEEEEECCCCC SLGVYRAEIEDDEHPHCEVSTGERNFCRKCGSALWLYDPTWPELVHPFASAIDSDLPKPP CCCEEEEECCCCCCCCEEEECCCHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHCCCCCC SRVHLMLKYKANWVEPVIGKGDKTFDVYPEESIADWHKLTGMWVD CCEEEEEEECCCCCCHHHCCCCCEEECCCCHHHHHHHHHCCEECC >Mature Secondary Structure PLLLKGSCRCNAVRFEVESHTPVPFMLCYCSICRKQQGGGGFAINLGAAYETLNIRGKR CEEECCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEECCCEEEEEECCCCC SLGVYRAEIEDDEHPHCEVSTGERNFCRKCGSALWLYDPTWPELVHPFASAIDSDLPKPP CCCEEEEECCCCCCCCEEEECCCHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHCCCCCC SRVHLMLKYKANWVEPVIGKGDKTFDVYPEESIADWHKLTGMWVD CCEEEEEEECCCCCCHHHCCCCCEEECCCCHHHHHHHHHCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA