Click here to switch to the map view.

The map label for this gene is paiB [H]

Identifier: 13470340

GI number: 13470340

Start: 11379

End: 12029

Strand: Reverse

Name: paiB [H]

Synonym: mll0013

Alternate gene names: 13470340

Gene position: 12029-11379 (Counterclockwise)

Preceding gene: 13470341

Following gene: 13470335

Centisome position: 0.17

GC content: 65.13

Gene sequence:

>651_bases
ATGTACGAGCCTCCCCATTTCCAGGAAACGCGGCCCGACGTGCTGCATGGACTGATCAGGGCACATCCGCTCGGCATGCT
GATCTCGAACGGGCCTGACGGCCCGGTCGCCAATGCCATTCCCTTCCTGCTCGACGCCGAAGGGTTGTCGAACGGCAGAC
TGCGGGCTCACCTGGCCAAGGCCAACCCGCACTGGCGCCTCATTGCCGACAATCCGGCGTCGCCCGTGCTGATCGTCTTC
CAGGGCGCCGACGCGTATGTGACGCCTTCCTGGTATGAGACCAAGCGCGAGACCGGCAAGGTGGTGCCGACCTGGAACTA
CGCCATCGTGCAGGTGCGCGGCACCGCAAAGGTGATCGACGACCAGGAGTGGCTGGCACAGCAGATCGCCGATCTGACCG
GCTCCCAGGAAGGCGCGCGCCAGGCGCCCTGGGCAGTGACCGATGCGCCGCCGCCCTTCATCCAGTCGCAGATCAAGGGC
ATCATCGGGCTTGAGATCGAGATCAGCGAGATCCACGGCAAGTGGAAGGTCAGCCAGAACCGCCCCGTCGCAGATCGCGC
CGGCGTGGCACAGGGGCTGGAAAGCGAAGTCGCCGACGCATCCGACATGGCTCGCCTGGTAAGGTCCTACGGCGGCCTGG
ACAGCAATTAA

Upstream 100 bases:

>100_bases
GATCGAGGAATGCGCGGACTATCTCGATCGCCGGCTGGCGGGCGAATTGTCCGATCCGCGGCCCAAGCGGCTGAGATAAG
CAGGAAAGGCGCAATCGCCG

Downstream 100 bases:

>100_bases
TCCGGCAACGACTTATTTTTGCGGGGCAATCAACCGGAACGATGCTTTGCGGACCGGCAACCCCGACGGCGTCGCACGGA
AGATGAAGCCGAGCCGGGCA

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MYEPPHFQETRPDVLHGLIRAHPLGMLISNGPDGPVANAIPFLLDAEGLSNGRLRAHLAKANPHWRLIADNPASPVLIVF
QGADAYVTPSWYETKRETGKVVPTWNYAIVQVRGTAKVIDDQEWLAQQIADLTGSQEGARQAPWAVTDAPPPFIQSQIKG
IIGLEIEISEIHGKWKVSQNRPVADRAGVAQGLESEVADASDMARLVRSYGGLDSN

Sequences:

>Translated_216_residues
MYEPPHFQETRPDVLHGLIRAHPLGMLISNGPDGPVANAIPFLLDAEGLSNGRLRAHLAKANPHWRLIADNPASPVLIVF
QGADAYVTPSWYETKRETGKVVPTWNYAIVQVRGTAKVIDDQEWLAQQIADLTGSQEGARQAPWAVTDAPPPFIQSQIKG
IIGLEIEISEIHGKWKVSQNRPVADRAGVAQGLESEVADASDMARLVRSYGGLDSN
>Mature_216_residues
MYEPPHFQETRPDVLHGLIRAHPLGMLISNGPDGPVANAIPFLLDAEGLSNGRLRAHLAKANPHWRLIADNPASPVLIVF
QGADAYVTPSWYETKRETGKVVPTWNYAIVQVRGTAKVIDDQEWLAQQIADLTGSQEGARQAPWAVTDAPPPFIQSQIKG
IIGLEIEISEIHGKWKVSQNRPVADRAGVAQGLESEVADASDMARLVRSYGGLDSN

Specific function: Involved in the reduction of extracellular and cell- associated protease levels, as well as in the reduced levels of alpha-amylase, levansucrase, alkaline phosphatase and sporulation inhibition, when present in high copy number [H]

COG id: COG2808

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the paiB family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6322780, Length=159, Percent_Identity=34.5911949685535, Blast_Score=92, Evalue=4e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007396
- InterPro:   IPR012349
- InterPro:   IPR009002 [H]

Pfam domain/function: PF04299 FMN_bind_2 [H]

EC number: NA

Molecular weight: Translated: 23540; Mature: 23540

Theoretical pI: Translated: 5.59; Mature: 5.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYEPPHFQETRPDVLHGLIRAHPLGMLISNGPDGPVANAIPFLLDAEGLSNGRLRAHLAK
CCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCHHHCCCCEEECCCCCCCCEEEEEEC
ANPHWRLIADNPASPVLIVFQGADAYVTPSWYETKRETGKVVPTWNYAIVQVRGTAKVID
CCCCEEEEECCCCCCEEEEEECCCCEECCCHHHHHHHCCCEEECCCEEEEEEECCCEEEC
DQEWLAQQIADLTGSQEGARQAPWAVTDAPPPFIQSQIKGIIGLEIEISEIHGKWKVSQN
CHHHHHHHHHHHCCCCCCCCCCCEEECCCCCHHHHHHHCCEECEEEEEEECCCEEEECCC
RPVADRAGVAQGLESEVADASDMARLVRSYGGLDSN
CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MYEPPHFQETRPDVLHGLIRAHPLGMLISNGPDGPVANAIPFLLDAEGLSNGRLRAHLAK
CCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCHHHCCCCEEECCCCCCCCEEEEEEC
ANPHWRLIADNPASPVLIVFQGADAYVTPSWYETKRETGKVVPTWNYAIVQVRGTAKVID
CCCCEEEEECCCCCCEEEEEECCCCEECCCHHHHHHHCCCEEECCCEEEEEEECCCEEEC
DQEWLAQQIADLTGSQEGARQAPWAVTDAPPPFIQSQIKGIIGLEIEISEIHGKWKVSQN
CHHHHHHHHHHHCCCCCCCCCCCEEECCCCCHHHHHHHCCEECEEEEEEECCCEEEECCC
RPVADRAGVAQGLESEVADASDMARLVRSYGGLDSN
CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2108124; 9384377 [H]