| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13470337
Identifier: 13470337
GI number: 13470337
Start: 8483
End: 8815
Strand: Direct
Name: 13470337
Synonym: mlr0010
Alternate gene names: NA
Gene position: 8483-8815 (Clockwise)
Preceding gene: 13470336
Following gene: 13470338
Centisome position: 0.12
GC content: 57.96
Gene sequence:
>333_bases GTGTTTAACGTGCTTCAGGAACTGGGGACCTGGCTTCACCAGGTCTTCATCAAGCAATTCGATGCGTGGATCCTGCTCGG CTTCGTTGCGCAGTTCTTCTTCACCATGCGCTTTGTCGTGCAATGGCTCGCCTCGGAAAAGGCCAAGCGCAGCGTCGTGC CGGTCGCCTTCTGGTTCTTCTCGCTGTTCGGCGGCGGCCTGCTGCTGATCTATGCCATCCAGCGCCAGGATCCGGTGTTC ATCGCCGGCCAGGCCATGGGCATGTTCATCTACATCAGAAATCTCTGGCTGATCGCCAATGAGCGCAAGGCGGCGATGAC CAAGGTCGATTGA
Upstream 100 bases:
>100_bases GGCATTTTCGACCGCGGCCTGCAGGGCGCGCTCGACCTTGGCGGTGTCTGGTGGCTGCGCCGCCGGCGCCGCAGAATGCC AAAAGTAGAGGAAATCAAGC
Downstream 100 bases:
>100_bases GCACCGTCACTTCCGAGAAACTGGTCACAGAGGCTAAAGCATGGCGTTGAACAGGAACTACATTCTTCTCTTCCTGTTCA GCCTGGTGATGACGCTTTCG
Product: hypothetical protein
Products: NA
Alternate protein names: Lipid A Biosynthesis Domain Protein; Lipid A Biosynthesis; Lipid A Biosynthesis-Like; Lipid A Biosynthesis N-Terminal; Lipid A Biosynthesis Protein; Lipid-A-Disaccharide Synthase Domain-Containing Protein; LAB_N Domain-Containing Protein; Lipid-A-Disaccharide Synthase; Lipid A Disaccharide Synthase; Lipid A Biosynthesis N-Terminal Domain Family; Lipid A Biosynthesis N-Terminal Domain Protein
Number of amino acids: Translated: 110; Mature: 110
Protein sequence:
>110_residues MFNVLQELGTWLHQVFIKQFDAWILLGFVAQFFFTMRFVVQWLASEKAKRSVVPVAFWFFSLFGGGLLLIYAIQRQDPVF IAGQAMGMFIYIRNLWLIANERKAAMTKVD
Sequences:
>Translated_110_residues MFNVLQELGTWLHQVFIKQFDAWILLGFVAQFFFTMRFVVQWLASEKAKRSVVPVAFWFFSLFGGGLLLIYAIQRQDPVF IAGQAMGMFIYIRNLWLIANERKAAMTKVD >Mature_110_residues MFNVLQELGTWLHQVFIKQFDAWILLGFVAQFFFTMRFVVQWLASEKAKRSVVPVAFWFFSLFGGGLLLIYAIQRQDPVF IAGQAMGMFIYIRNLWLIANERKAAMTKVD
Specific function: Unknown
COG id: COG3952
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12845; Mature: 12845
Theoretical pI: Translated: 10.46; Mature: 10.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFNVLQELGTWLHQVFIKQFDAWILLGFVAQFFFTMRFVVQWLASEKAKRSVVPVAFWFF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH SLFGGGLLLIYAIQRQDPVFIAGQAMGMFIYIRNLWLIANERKAAMTKVD HHHCCCEEEEEEECCCCCEEEEHHHHHHHHHHHHHHHEECCCHHHHCCCC >Mature Secondary Structure MFNVLQELGTWLHQVFIKQFDAWILLGFVAQFFFTMRFVVQWLASEKAKRSVVPVAFWFF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH SLFGGGLLLIYAIQRQDPVFIAGQAMGMFIYIRNLWLIANERKAAMTKVD HHHCCCEEEEEEECCCCCEEEEHHHHHHHHHHHHHHHEECCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA