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The map label for this gene is recO [H]

Identifier: 15603732

GI number: 15603732

Start: 2109465

End: 2110175

Strand: Reverse

Name: recO [H]

Synonym: PM1867

Alternate gene names: 15603732

Gene position: 2110175-2109465 (Counterclockwise)

Preceding gene: 15603736

Following gene: 15603731

Centisome position: 93.47

GC content: 42.05

Gene sequence:

>711_bases
ATCGAAAATTGGCAACGGGGTTTTGTCTTACATCGCAAAGCCTATAGTGAAACAAGCTTATTAGTTGAGTTATTCACCGA
AGAAACAGGGCGTCTAACCGTACTTGCCAAAGGTGCGCGAGCAAAACGTTCCGCATTAAAAGGCATCTTACAGCCTTTTA
CCCCTTTGCTATTGCGTTGGAGTGGGCGCAGTGAATTGAAAACATTGACGAAAGTAGAACCTGCTGCCATTGCATTACCG
TTACAACAGACCGCACTTTATAGCGGATTCTATGTTAATGAATTGCTCTGTCGCGTCCTTGAACCCGAAACTGGTTATCC
CCATCTGTTCCAAGACTATTTACGTTGCCTAACTGGCTTGGCAAGCGCAGAACATCTGATTGAGCCTAGTCTGCGTCACT
TTGAATTTCAATTATTACAAACTTTAGGCTACGGCGTCGATTTTTGCCATTGTGCTGGCTCAGGCGAGCTGGTTGATGAA
AATATGACTTATCGTTATCGTGAAGAAAAAGGCTTTATTGCATCGCTCATTAAGGATAATTTAACTTTTTATGGTCGTGA
ATTACTGGCTTTTGACGCAAGACAATTTCACGACAGCGCCACTTTACAGGCGGCTAAACGTTTCACTCGCATCGCGCTTA
AACAGTATTTAGGGAATAAGCCCTTAAAAAGCCGAGAATTATTTACTCAATATATGTTGTATCAAAAATAA

Upstream 100 bases:

>100_bases
TTGTTTTCATTTTAAGCAAGAAAAAACAGAAATCCCCAAATATCCAGTGAAAATCTGCTAAAATAACAGGCGATTTAGTT
AGCAAAAGTTGAGGCAAGTT

Downstream 100 bases:

>100_bases
ACTATGGTATTACACTATACCCCTCATCAATCCGCCCCACGCAACACAACATTCGTTGCGGAAATTCTTGATCTTGATTA
TCAAGGACGTGGTGTAGCCA

Product: DNA repair protein RecO

Products: NA

Alternate protein names: Recombination protein O [H]

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MENWQRGFVLHRKAYSETSLLVELFTEETGRLTVLAKGARAKRSALKGILQPFTPLLLRWSGRSELKTLTKVEPAAIALP
LQQTALYSGFYVNELLCRVLEPETGYPHLFQDYLRCLTGLASAEHLIEPSLRHFEFQLLQTLGYGVDFCHCAGSGELVDE
NMTYRYREEKGFIASLIKDNLTFYGRELLAFDARQFHDSATLQAAKRFTRIALKQYLGNKPLKSRELFTQYMLYQK

Sequences:

>Translated_236_residues
MENWQRGFVLHRKAYSETSLLVELFTEETGRLTVLAKGARAKRSALKGILQPFTPLLLRWSGRSELKTLTKVEPAAIALP
LQQTALYSGFYVNELLCRVLEPETGYPHLFQDYLRCLTGLASAEHLIEPSLRHFEFQLLQTLGYGVDFCHCAGSGELVDE
NMTYRYREEKGFIASLIKDNLTFYGRELLAFDARQFHDSATLQAAKRFTRIALKQYLGNKPLKSRELFTQYMLYQK
>Mature_236_residues
MENWQRGFVLHRKAYSETSLLVELFTEETGRLTVLAKGARAKRSALKGILQPFTPLLLRWSGRSELKTLTKVEPAAIALP
LQQTALYSGFYVNELLCRVLEPETGYPHLFQDYLRCLTGLASAEHLIEPSLRHFEFQLLQTLGYGVDFCHCAGSGELVDE
NMTYRYREEKGFIASLIKDNLTFYGRELLAFDARQFHDSATLQAAKRFTRIALKQYLGNKPLKSRELFTQYMLYQK

Specific function: Involved in DNA repair and recF pathway recombination [H]

COG id: COG1381

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recO family [H]

Homologues:

Organism=Escherichia coli, GI2367140, Length=232, Percent_Identity=64.6551724137931, Blast_Score=308, Evalue=3e-85,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001164
- InterPro:   IPR022572
- InterPro:   IPR016027
- InterPro:   IPR003717 [H]

Pfam domain/function: PF02565 RecO; PF11967 RecO_N [H]

EC number: NA

Molecular weight: Translated: 27143; Mature: 27143

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENWQRGFVLHRKAYSETSLLVELFTEETGRLTVLAKGARAKRSALKGILQPFTPLLLRW
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHEEC
SGRSELKTLTKVEPAAIALPLQQTALYSGFYVNELLCRVLEPETGYPHLFQDYLRCLTGL
CCHHHHHHHHHCCCHHEEECHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
ASAEHLIEPSLRHFEFQLLQTLGYGVDFCHCAGSGELVDENMTYRYREEKGFIASLIKDN
HHHHHHHCHHHHHHHHHHHHHHCCCCCEEEECCCCCEECCCCCEEEHHHHHHHHHHHHHH
LTFYGRELLAFDARQFHDSATLQAAKRFTRIALKQYLGNKPLKSRELFTQYMLYQK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MENWQRGFVLHRKAYSETSLLVELFTEETGRLTVLAKGARAKRSALKGILQPFTPLLLRW
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHEEC
SGRSELKTLTKVEPAAIALPLQQTALYSGFYVNELLCRVLEPETGYPHLFQDYLRCLTGL
CCHHHHHHHHHCCCHHEEECHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
ASAEHLIEPSLRHFEFQLLQTLGYGVDFCHCAGSGELVDENMTYRYREEKGFIASLIKDN
HHHHHHHCHHHHHHHHHHHHHHCCCCCEEEECCCCCEECCCCCEEEHHHHHHHHHHHHHH
LTFYGRELLAFDARQFHDSATLQAAKRFTRIALKQYLGNKPLKSRELFTQYMLYQK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11248100 [H]