Click here to switch to the map view.

The map label for this gene is pssA [H]

Identifier: 15603721

GI number: 15603721

Start: 2097904

End: 2099280

Strand: Reverse

Name: pssA [H]

Synonym: PM1856

Alternate gene names: 15603721

Gene position: 2099280-2097904 (Counterclockwise)

Preceding gene: 15603723

Following gene: 15603714

Centisome position: 92.99

GC content: 39.94

Gene sequence:

>1377_bases
ATGCTGATAAACAAAACCAAACGAGCAAAACAAAATATCAATCGTTTATTCTGTTTACCCTTACAAGCTGAACACGTTGA
ATTTATTTATAGCGCTGCCGCATTCAAACAGCAAACCCTTCAGCTCATTAAACAAGCAAAATCACGCATTTATGTGACCG
CACTTTATTGGCAACATGACGAAGCGGGTCAAGAAATTTTAGATGAAATCTACCGTGCCAAACAAAACAACCCGTCATTA
GAAATCAAGATTTTAATTGACTGGCACCGTGCACAACGCAATTTACTGGGTGCGGAAAAAAGTATGACTAATGCTGACTG
GTATTGTGAACAACGTGCGAAATATCAAGCAGAGCAAGATTCACCTCTCTTTTTTGGGGTGCCAGTGAACACTCGAGAAG
TCTTTGGTGTGTTACATATTAAAGGCTTTGTGTTTGATGATACGGTCTTATACAGCGGTGCAAGCATTAACAATGTTTAC
TTAAATCAATTTAATAAATACCGTTACGATCGCTACCATAAAATCACGCATCCTGAATTAGCCAACAGCATGGTGAACTT
TATCAACGACTATTTGTTGGATCCGTTAGCTGTTCACCCATTAGATCAGAACACTCGTCCAACAACCAAAGAAATACGCC
CCGCGATTAAAGAATTTCGTAAAACACTCGCTTTTGATGCCCGTTATACGTTAAAAGGCGCGCGTTTCTTGGAGGAAACA
CCTGAACAACTCAGTATTTCTGCGCTTTTTGGCTTGAGTAAATACAGTAACCAATTAAACCAAGTGATCGAGGATCTCTT
CCAAATTGTGGAAGAGGAATTAGTGATTTGTACCCCTTATTTTAATTTTCCGCGTACGCTACAACAAAAAATCCGCCGCT
TGCTGAATAAAGGGAAAAAAGTGGAAATTATTGTCGGTGACAAAACTGCAAATGACTTCTATATCCCGCCTTCAGAACCC
TTTAAAATGGCGGGTGCCTTGCCTTATCTATACGAAAGCAATTTACGCCGTTTTAGCAAAAAGTTTGAATATGAGATTAA
CCAAGGTTTGTTAGTGATTCGGACTTGGAAAGATGGGGATAATTCATACCACTTGAAAGGGGTTTGGGTCGATAACAATT
ATGTGCTCCTCACTGGCAATAATCTAAATCCTCGAGCATGGCGCTTGGATGCGGAGAATGGTTTATTTATCTACGATCCA
AAACAAGAGCTACGCGCACAATTTGAACAAGAACTGGATTACATTCGCCAACATACGCAAGTGTTGCGCCATTATTCTGA
ACTTGACGAAATGAAACAGTATCCGGCCCCCGTACAAAAGTTATTGAAAAAATTTGCCCGTGTAAAAGCGGATAAGCTCG
TGAAGATGATCTTATAA

Upstream 100 bases:

>100_bases
AAAGTGTGAGCATTATAACGAAAAAACCGCATTTTTCTACCAAGTCGCGAGGTAAATATTGTAAACTACAGAGCTAATCA
AACTATAGAGAATGATTTTT

Downstream 100 bases:

>100_bases
TAGTCAATCACTCTGTCGTGGTGATATTTTCTCATTCAAAAAAACATAAAAAAGACCGCACTTTCGCGGTCTTTTTTAAA
CGACACAGTCAGTTAAGAAA

Product: phosphatidylserine synthase

Products: NA

Alternate protein names: Phosphatidylserine synthase [H]

Number of amino acids: Translated: 458; Mature: 458

Protein sequence:

>458_residues
MLINKTKRAKQNINRLFCLPLQAEHVEFIYSAAAFKQQTLQLIKQAKSRIYVTALYWQHDEAGQEILDEIYRAKQNNPSL
EIKILIDWHRAQRNLLGAEKSMTNADWYCEQRAKYQAEQDSPLFFGVPVNTREVFGVLHIKGFVFDDTVLYSGASINNVY
LNQFNKYRYDRYHKITHPELANSMVNFINDYLLDPLAVHPLDQNTRPTTKEIRPAIKEFRKTLAFDARYTLKGARFLEET
PEQLSISALFGLSKYSNQLNQVIEDLFQIVEEELVICTPYFNFPRTLQQKIRRLLNKGKKVEIIVGDKTANDFYIPPSEP
FKMAGALPYLYESNLRRFSKKFEYEINQGLLVIRTWKDGDNSYHLKGVWVDNNYVLLTGNNLNPRAWRLDAENGLFIYDP
KQELRAQFEQELDYIRQHTQVLRHYSELDEMKQYPAPVQKLLKKFARVKADKLVKMIL

Sequences:

>Translated_458_residues
MLINKTKRAKQNINRLFCLPLQAEHVEFIYSAAAFKQQTLQLIKQAKSRIYVTALYWQHDEAGQEILDEIYRAKQNNPSL
EIKILIDWHRAQRNLLGAEKSMTNADWYCEQRAKYQAEQDSPLFFGVPVNTREVFGVLHIKGFVFDDTVLYSGASINNVY
LNQFNKYRYDRYHKITHPELANSMVNFINDYLLDPLAVHPLDQNTRPTTKEIRPAIKEFRKTLAFDARYTLKGARFLEET
PEQLSISALFGLSKYSNQLNQVIEDLFQIVEEELVICTPYFNFPRTLQQKIRRLLNKGKKVEIIVGDKTANDFYIPPSEP
FKMAGALPYLYESNLRRFSKKFEYEINQGLLVIRTWKDGDNSYHLKGVWVDNNYVLLTGNNLNPRAWRLDAENGLFIYDP
KQELRAQFEQELDYIRQHTQVLRHYSELDEMKQYPAPVQKLLKKFARVKADKLVKMIL
>Mature_458_residues
MLINKTKRAKQNINRLFCLPLQAEHVEFIYSAAAFKQQTLQLIKQAKSRIYVTALYWQHDEAGQEILDEIYRAKQNNPSL
EIKILIDWHRAQRNLLGAEKSMTNADWYCEQRAKYQAEQDSPLFFGVPVNTREVFGVLHIKGFVFDDTVLYSGASINNVY
LNQFNKYRYDRYHKITHPELANSMVNFINDYLLDPLAVHPLDQNTRPTTKEIRPAIKEFRKTLAFDARYTLKGARFLEET
PEQLSISALFGLSKYSNQLNQVIEDLFQIVEEELVICTPYFNFPRTLQQKIRRLLNKGKKVEIIVGDKTANDFYIPPSEP
FKMAGALPYLYESNLRRFSKKFEYEINQGLLVIRTWKDGDNSYHLKGVWVDNNYVLLTGNNLNPRAWRLDAENGLFIYDP
KQELRAQFEQELDYIRQHTQVLRHYSELDEMKQYPAPVQKLLKKFARVKADKLVKMIL

Specific function: Unknown

COG id: COG1502

COG function: function code I; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes

Gene ontology:

Cell location: Cytoplasm. Cell inner membrane; Peripheral membrane protein; Cytoplasmic side [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PLD phosphodiesterase domains [H]

Homologues:

Organism=Escherichia coli, GI87082134, Length=439, Percent_Identity=49.6583143507973, Blast_Score=439, Evalue=1e-124,
Organism=Caenorhabditis elegans, GI25143331, Length=459, Percent_Identity=22.0043572984749, Blast_Score=77, Evalue=3e-14,
Organism=Saccharomyces cerevisiae, GI6319842, Length=379, Percent_Identity=25.065963060686, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI28572961, Length=469, Percent_Identity=24.5202558635394, Blast_Score=82, Evalue=5e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016270
- InterPro:   IPR001736 [H]

Pfam domain/function: PF00614 PLDc [H]

EC number: =2.7.8.8 [H]

Molecular weight: Translated: 53840; Mature: 53840

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: PS50035 PLD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLINKTKRAKQNINRLFCLPLQAEHVEFIYSAAAFKQQTLQLIKQAKSRIYVTALYWQHD
CCCCCHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCC
EAGQEILDEIYRAKQNNPSLEIKILIDWHRAQRNLLGAEKSMTNADWYCEQRAKYQAEQD
HHHHHHHHHHHHHCCCCCCEEEEEEEEEHHHHHHHHCCHHCCCCCHHHHHHHHHCCCCCC
SPLFFGVPVNTREVFGVLHIKGFVFDDTVLYSGASINNVYLNQFNKYRYDRYHKITHPEL
CCEEEECCCCHHHHHEEEEEEEEEEECHHEECCCCCCHHHHHHHHHHHHHHHHCCCCHHH
ANSMVNFINDYLLDPLAVHPLDQNTRPTTKEIRPAIKEFRKTLAFDARYTLKGARFLEET
HHHHHHHHHHHHCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC
PEQLSISALFGLSKYSNQLNQVIEDLFQIVEEELVICTPYFNFPRTLQQKIRRLLNKGKK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHCCCCE
VEIIVGDKTANDFYIPPSEPFKMAGALPYLYESNLRRFSKKFEYEINQGLLVIRTWKDGD
EEEEECCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHCEEECCCEEEEEEEECCC
NSYHLKGVWVDNNYVLLTGNNLNPRAWRLDAENGLFIYDPKQELRAQFEQELDYIRQHTQ
CCEEEEEEEEECCEEEEECCCCCCCEEEEECCCCEEEECCHHHHHHHHHHHHHHHHHHHH
VLRHYSELDEMKQYPAPVQKLLKKFARVKADKLVKMIL
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MLINKTKRAKQNINRLFCLPLQAEHVEFIYSAAAFKQQTLQLIKQAKSRIYVTALYWQHD
CCCCCHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCC
EAGQEILDEIYRAKQNNPSLEIKILIDWHRAQRNLLGAEKSMTNADWYCEQRAKYQAEQD
HHHHHHHHHHHHHCCCCCCEEEEEEEEEHHHHHHHHCCHHCCCCCHHHHHHHHHCCCCCC
SPLFFGVPVNTREVFGVLHIKGFVFDDTVLYSGASINNVYLNQFNKYRYDRYHKITHPEL
CCEEEECCCCHHHHHEEEEEEEEEEECHHEECCCCCCHHHHHHHHHHHHHHHHCCCCHHH
ANSMVNFINDYLLDPLAVHPLDQNTRPTTKEIRPAIKEFRKTLAFDARYTLKGARFLEET
HHHHHHHHHHHHCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC
PEQLSISALFGLSKYSNQLNQVIEDLFQIVEEELVICTPYFNFPRTLQQKIRRLLNKGKK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHCCCCE
VEIIVGDKTANDFYIPPSEPFKMAGALPYLYESNLRRFSKKFEYEINQGLLVIRTWKDGD
EEEEECCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHCEEECCCEEEEEEEECCC
NSYHLKGVWVDNNYVLLTGNNLNPRAWRLDAENGLFIYDPKQELRAQFEQELDYIRQHTQ
CCEEEEEEEEECCEEEEECCCCCCCEEEEECCCCEEEECCHHHHHHHHHHHHHHHHHHHH
VLRHYSELDEMKQYPAPVQKLLKKFARVKADKLVKMIL
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]