| Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
|---|---|
| Accession | NC_002663 |
| Length | 2,257,487 |
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The map label for this gene is srmB [H]
Identifier: 15603705
GI number: 15603705
Start: 2079149
End: 2080477
Strand: Direct
Name: srmB [H]
Synonym: PM1840
Alternate gene names: 15603705
Gene position: 2079149-2080477 (Clockwise)
Preceding gene: 15603703
Following gene: 15603706
Centisome position: 92.1
GC content: 44.24
Gene sequence:
>1329_bases ATGACATTAGCCACTTTTCAAGATTTTGATCTCGCTCCTGCCTTACTGAAAGCACTCGCTAAAAAAGGCTACACTCGTCC AACAGCGATTCAGCAAGAAACGATTCCCGCCGCCATGGAACAACGTGACGTGCTAGGTTCTGCACCAACAGGTACCGGTA AAACAGCCGCCTTTTTACTGCCAGCCATTCAGCACTTACTCGATTATCCACGTCGCAAACCAGGCGCCCCACGTATTTTA ATTTTAACGCCAACTCGTGAACTTGCTATGCAAGTAGCAGAGCAGGCAGAAAGCTTTGCGGAATTCACGAATTTGAGTAT CGCGACCATTACCGGTGGTGTGGCTTACCAAAACCATGGGGAAATTTTTAACAGCAATCAAGATATCGTAGTGGCAACCC CAGGACGCTTATTGCAATACATTAAAGAAGAAAACTTTGATTGTCGTTCCGTCGAAATGCTCATCTTCGATGAAGCGGAT CGCATGCTTCAAATGGGTTTTGGACAAGATGCTGAAAAAATTGCCGCTGAAACTCGCTGGCGTAAACAAACCTTGCTATT TTCCGCCACATTAGAGGGCGAATTACTGGTGGATTTCGCCAGTCGATTATTAACAGAACCCGTGCAAATTGACGCTGAGC CCAGTCGCCGTGAGCGTAAAAAAATTCAGCAATGGTATTATCATGCTGACAGCAATGAACACAAAATCAAATTATTGGCA CGTTTTATTGATGAAGAACAAGTGAGCCGAGGTATTGTGTTCGTACGTCGACGTGAAGAGGTGCGTGAACTGTCCGAAAC TTTGCGTAAACGCGGTATTCGTTCCACCTATTTAGAAGGTGAAATGGCACAAACTCAACGCAATAACGCTATTGATAAAC TTAAAAATGGTATTGTGACGGTCTTAGTAGCAACTGATGTCGCCGCACGTGGGATTGATATCGAAGATGTCAGCCATGTC ATGAACTTCGACTTACCATACAGCGCAGATACCTATTTGCACCGGATTGGACGTACTGCACGCGCAGGTAAAAAAGGCGT AGCGGTGTCTTTTGTGGAAGCCCATGATTATAAATTGTTGGGTAAAATCAAACGTTACACCCAAGAATTACTGAAAGCAC GTATTATCGAAGGCTTAGCCCCTCGCACCAAAGCACCGAAAGAGGGAGAAGTTAAAACGGTCAGTAAAAAGCAAAAAGCC CGCATTAAAGCAAAACGTGAAGAGAAGCAAAAACAAGAGCAAAAGAAAAAAGTGAAACTGCGTCATAAAGATACAAAAAA TATTGGTAAACGTCGCAAATCCAATACCCCCCCTGCTAACGCAGAATAA
Upstream 100 bases:
>100_bases ATATTGACCGCCTTTTGGTATAAATAGCGTCTTCATTTCGCAACACGGACAAAGTGCGCTATAATCTGCCACAATTTTAC AATGATAGAAACCCATACTC
Downstream 100 bases:
>100_bases TCACATCTAAATTGCTAACCCTTTTTTCTGGCTAGATTATTTATCTAATAAGATCAAAGGGTTATTTTTATGTCTAGAAA AAGGGTTTTTAACAGTTTGA
Product: ATP-dependent RNA helicase SrmB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 442; Mature: 441
Protein sequence:
>442_residues MTLATFQDFDLAPALLKALAKKGYTRPTAIQQETIPAAMEQRDVLGSAPTGTGKTAAFLLPAIQHLLDYPRRKPGAPRIL ILTPTRELAMQVAEQAESFAEFTNLSIATITGGVAYQNHGEIFNSNQDIVVATPGRLLQYIKEENFDCRSVEMLIFDEAD RMLQMGFGQDAEKIAAETRWRKQTLLFSATLEGELLVDFASRLLTEPVQIDAEPSRRERKKIQQWYYHADSNEHKIKLLA RFIDEEQVSRGIVFVRRREEVRELSETLRKRGIRSTYLEGEMAQTQRNNAIDKLKNGIVTVLVATDVAARGIDIEDVSHV MNFDLPYSADTYLHRIGRTARAGKKGVAVSFVEAHDYKLLGKIKRYTQELLKARIIEGLAPRTKAPKEGEVKTVSKKQKA RIKAKREEKQKQEQKKKVKLRHKDTKNIGKRRKSNTPPANAE
Sequences:
>Translated_442_residues MTLATFQDFDLAPALLKALAKKGYTRPTAIQQETIPAAMEQRDVLGSAPTGTGKTAAFLLPAIQHLLDYPRRKPGAPRIL ILTPTRELAMQVAEQAESFAEFTNLSIATITGGVAYQNHGEIFNSNQDIVVATPGRLLQYIKEENFDCRSVEMLIFDEAD RMLQMGFGQDAEKIAAETRWRKQTLLFSATLEGELLVDFASRLLTEPVQIDAEPSRRERKKIQQWYYHADSNEHKIKLLA RFIDEEQVSRGIVFVRRREEVRELSETLRKRGIRSTYLEGEMAQTQRNNAIDKLKNGIVTVLVATDVAARGIDIEDVSHV MNFDLPYSADTYLHRIGRTARAGKKGVAVSFVEAHDYKLLGKIKRYTQELLKARIIEGLAPRTKAPKEGEVKTVSKKQKA RIKAKREEKQKQEQKKKVKLRHKDTKNIGKRRKSNTPPANAE >Mature_441_residues TLATFQDFDLAPALLKALAKKGYTRPTAIQQETIPAAMEQRDVLGSAPTGTGKTAAFLLPAIQHLLDYPRRKPGAPRILI LTPTRELAMQVAEQAESFAEFTNLSIATITGGVAYQNHGEIFNSNQDIVVATPGRLLQYIKEENFDCRSVEMLIFDEADR MLQMGFGQDAEKIAAETRWRKQTLLFSATLEGELLVDFASRLLTEPVQIDAEPSRRERKKIQQWYYHADSNEHKIKLLAR FIDEEQVSRGIVFVRRREEVRELSETLRKRGIRSTYLEGEMAQTQRNNAIDKLKNGIVTVLVATDVAARGIDIEDVSHVM NFDLPYSADTYLHRIGRTARAGKKGVAVSFVEAHDYKLLGKIKRYTQELLKARIIEGLAPRTKAPKEGEVKTVSKKQKAR IKAKREEKQKQEQKKKVKLRHKDTKNIGKRRKSNTPPANAE
Specific function: RNA-dependent ATPase activity. Probably interacts with 23S ribosomal RNA [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI224593278, Length=375, Percent_Identity=36.5333333333333, Blast_Score=242, Evalue=6e-64, Organism=Homo sapiens, GI45446747, Length=364, Percent_Identity=36.2637362637363, Blast_Score=237, Evalue=2e-62, Organism=Homo sapiens, GI45446743, Length=364, Percent_Identity=36.2637362637363, Blast_Score=237, Evalue=2e-62, Organism=Homo sapiens, GI20149629, Length=361, Percent_Identity=36.01108033241, Blast_Score=236, Evalue=5e-62, Organism=Homo sapiens, GI51094101, Length=349, Percent_Identity=37.8223495702006, Blast_Score=224, Evalue=2e-58, Organism=Homo sapiens, GI164419743, Length=349, Percent_Identity=37.8223495702006, Blast_Score=224, Evalue=2e-58, Organism=Homo sapiens, GI41327771, Length=394, Percent_Identity=32.741116751269, Blast_Score=221, Evalue=1e-57, Organism=Homo sapiens, GI7661920, Length=362, Percent_Identity=32.5966850828729, Blast_Score=219, Evalue=4e-57, Organism=Homo sapiens, GI31542656, Length=443, Percent_Identity=33.4085778781038, Blast_Score=218, Evalue=7e-57, Organism=Homo sapiens, GI4758138, Length=359, Percent_Identity=34.2618384401114, Blast_Score=216, Evalue=4e-56, Organism=Homo sapiens, GI148613856, Length=358, Percent_Identity=33.7988826815642, Blast_Score=213, Evalue=2e-55, Organism=Homo sapiens, GI38201710, Length=358, Percent_Identity=33.7988826815642, Blast_Score=213, Evalue=2e-55, Organism=Homo sapiens, GI262118318, Length=365, Percent_Identity=35.3424657534247, Blast_Score=211, Evalue=1e-54, Organism=Homo sapiens, GI216548263, Length=365, Percent_Identity=35.3424657534247, Blast_Score=209, Evalue=4e-54, Organism=Homo sapiens, GI262231852, Length=365, Percent_Identity=35.3424657534247, Blast_Score=209, Evalue=4e-54, Organism=Homo sapiens, GI13518015, Length=365, Percent_Identity=35.3424657534247, Blast_Score=209, Evalue=5e-54, Organism=Homo sapiens, GI41327773, Length=370, Percent_Identity=33.2432432432432, Blast_Score=207, Evalue=1e-53, Organism=Homo sapiens, GI222352149, Length=373, Percent_Identity=34.0482573726542, Blast_Score=206, Evalue=4e-53, Organism=Homo sapiens, GI188035877, Length=363, Percent_Identity=35.8126721763085, Blast_Score=205, Evalue=6e-53, Organism=Homo sapiens, GI41327776, Length=361, Percent_Identity=32.9639889196676, Blast_Score=204, Evalue=1e-52, Organism=Homo sapiens, GI21071032, Length=373, Percent_Identity=32.7077747989276, Blast_Score=202, Evalue=4e-52, Organism=Homo sapiens, GI21040371, Length=366, Percent_Identity=31.6939890710383, Blast_Score=202, Evalue=6e-52, Organism=Homo sapiens, GI4758112, Length=366, Percent_Identity=32.5136612021858, Blast_Score=202, Evalue=6e-52, Organism=Homo sapiens, GI18375623, Length=366, Percent_Identity=32.5136612021858, Blast_Score=202, Evalue=6e-52, Organism=Homo sapiens, GI164664518, Length=352, Percent_Identity=32.3863636363636, Blast_Score=200, Evalue=2e-51, Organism=Homo sapiens, GI55749865, Length=362, Percent_Identity=31.767955801105, Blast_Score=197, Evalue=2e-50, Organism=Homo sapiens, GI6005743, Length=377, Percent_Identity=32.8912466843501, Blast_Score=194, Evalue=1e-49, Organism=Homo sapiens, GI8922886, Length=377, Percent_Identity=32.6259946949602, Blast_Score=194, Evalue=2e-49, Organism=Homo sapiens, GI13514831, Length=378, Percent_Identity=35.1851851851852, Blast_Score=192, Evalue=6e-49, Organism=Homo sapiens, GI87196351, Length=368, Percent_Identity=32.8804347826087, Blast_Score=192, Evalue=6e-49, Organism=Homo sapiens, GI301171467, Length=368, Percent_Identity=32.8804347826087, Blast_Score=192, Evalue=6e-49, Organism=Homo sapiens, GI301171475, Length=368, Percent_Identity=32.8804347826087, Blast_Score=192, Evalue=7e-49, Organism=Homo sapiens, GI169881239, Length=371, Percent_Identity=32.8840970350404, Blast_Score=189, Evalue=3e-48, Organism=Homo sapiens, GI13514809, Length=371, Percent_Identity=32.8840970350404, Blast_Score=189, Evalue=3e-48, Organism=Homo sapiens, GI62241022, Length=356, Percent_Identity=33.4269662921348, Blast_Score=183, Evalue=3e-46, Organism=Homo sapiens, GI83700235, Length=363, Percent_Identity=30.8539944903581, Blast_Score=182, Evalue=4e-46, Organism=Homo sapiens, GI38569503, Length=386, Percent_Identity=34.7150259067358, Blast_Score=182, Evalue=7e-46, Organism=Homo sapiens, GI38569505, Length=386, Percent_Identity=34.7150259067358, Blast_Score=181, Evalue=1e-45, Organism=Homo sapiens, GI4503529, Length=364, Percent_Identity=30.4945054945055, Blast_Score=179, Evalue=3e-45, Organism=Homo sapiens, GI50659095, Length=372, Percent_Identity=33.0645161290323, Blast_Score=179, Evalue=5e-45, Organism=Homo sapiens, GI9506931, Length=397, Percent_Identity=30.4785894206549, Blast_Score=176, Evalue=4e-44, Organism=Homo sapiens, GI13129006, Length=366, Percent_Identity=31.9672131147541, Blast_Score=172, Evalue=7e-43, Organism=Homo sapiens, GI62241024, Length=335, Percent_Identity=33.7313432835821, Blast_Score=171, Evalue=1e-42, Organism=Homo sapiens, GI38327634, Length=334, Percent_Identity=33.8323353293413, Blast_Score=170, Evalue=3e-42, Organism=Homo sapiens, GI164419732, Length=364, Percent_Identity=30.7692307692308, Blast_Score=167, Evalue=2e-41, Organism=Homo sapiens, GI41327779, Length=420, Percent_Identity=31.9047619047619, Blast_Score=161, Evalue=9e-40, Organism=Homo sapiens, GI256223453, Length=358, Percent_Identity=29.608938547486, Blast_Score=155, Evalue=5e-38, Organism=Homo sapiens, GI9966805, Length=328, Percent_Identity=31.0975609756098, Blast_Score=148, Evalue=1e-35, Organism=Homo sapiens, GI17505907, Length=408, Percent_Identity=28.4313725490196, Blast_Score=141, Evalue=1e-33, Organism=Homo sapiens, GI154759257, Length=409, Percent_Identity=29.3398533007335, Blast_Score=134, Evalue=2e-31, Organism=Homo sapiens, GI4826686, Length=337, Percent_Identity=28.1899109792285, Blast_Score=125, Evalue=8e-29, Organism=Homo sapiens, GI256773275, Length=423, Percent_Identity=28.8416075650118, Blast_Score=122, Evalue=5e-28, Organism=Homo sapiens, GI20336298, Length=220, Percent_Identity=32.2727272727273, Blast_Score=103, Evalue=2e-22, Organism=Escherichia coli, GI1788930, Length=445, Percent_Identity=64.7191011235955, Blast_Score=552, Evalue=1e-158, Organism=Escherichia coli, GI1787016, Length=379, Percent_Identity=39.5778364116095, Blast_Score=271, Evalue=8e-74, Organism=Escherichia coli, GI87082221, Length=362, Percent_Identity=41.9889502762431, Blast_Score=269, Evalue=2e-73, Organism=Escherichia coli, GI1790214, Length=363, Percent_Identity=38.0165289256198, Blast_Score=242, Evalue=3e-65, Organism=Escherichia coli, GI1787605, Length=343, Percent_Identity=37.6093294460641, Blast_Score=209, Evalue=2e-55, Organism=Caenorhabditis elegans, GI17552642, Length=364, Percent_Identity=36.2637362637363, Blast_Score=237, Evalue=1e-62, Organism=Caenorhabditis elegans, GI17555296, Length=440, Percent_Identity=33.4090909090909, Blast_Score=234, Evalue=6e-62, Organism=Caenorhabditis elegans, GI71995724, Length=364, Percent_Identity=34.0659340659341, Blast_Score=229, Evalue=2e-60, Organism=Caenorhabditis elegans, GI17507121, Length=365, Percent_Identity=33.6986301369863, Blast_Score=228, Evalue=4e-60, Organism=Caenorhabditis elegans, GI86570094, Length=357, Percent_Identity=38.0952380952381, Blast_Score=228, Evalue=5e-60, Organism=Caenorhabditis elegans, GI71999646, Length=349, Percent_Identity=36.3896848137536, Blast_Score=224, Evalue=1e-58, Organism=Caenorhabditis elegans, GI71999644, Length=349, Percent_Identity=36.3896848137536, Blast_Score=224, Evalue=1e-58, Organism=Caenorhabditis elegans, GI17510559, Length=386, Percent_Identity=33.9378238341969, Blast_Score=223, Evalue=1e-58, Organism=Caenorhabditis elegans, GI17510307, Length=363, Percent_Identity=34.7107438016529, Blast_Score=218, Evalue=3e-57, Organism=Caenorhabditis elegans, GI17510309, Length=363, Percent_Identity=34.7107438016529, Blast_Score=218, Evalue=4e-57, Organism=Caenorhabditis elegans, GI71995514, Length=363, Percent_Identity=35.2617079889807, Blast_Score=218, Evalue=4e-57, Organism=Caenorhabditis elegans, GI71987143, Length=362, Percent_Identity=32.0441988950276, Blast_Score=218, Evalue=7e-57, Organism=Caenorhabditis elegans, GI32565321, Length=426, Percent_Identity=32.1596244131455, Blast_Score=217, Evalue=9e-57, Organism=Caenorhabditis elegans, GI115533224, Length=346, Percent_Identity=36.1271676300578, Blast_Score=215, Evalue=4e-56, Organism=Caenorhabditis elegans, GI17509811, Length=374, Percent_Identity=33.6898395721925, Blast_Score=202, Evalue=3e-52, Organism=Caenorhabditis elegans, GI17507879, Length=386, Percent_Identity=34.9740932642487, Blast_Score=201, Evalue=5e-52, Organism=Caenorhabditis elegans, GI17507877, Length=381, Percent_Identity=34.9081364829396, Blast_Score=201, Evalue=9e-52, Organism=Caenorhabditis elegans, GI17537549, Length=363, Percent_Identity=33.3333333333333, Blast_Score=196, Evalue=3e-50, Organism=Caenorhabditis elegans, GI17507881, Length=384, Percent_Identity=33.0729166666667, Blast_Score=194, Evalue=9e-50, Organism=Caenorhabditis elegans, GI17507945, Length=361, Percent_Identity=32.1329639889197, Blast_Score=193, Evalue=1e-49, Organism=Caenorhabditis elegans, GI17552114, Length=382, Percent_Identity=31.413612565445, Blast_Score=193, Evalue=2e-49, Organism=Caenorhabditis elegans, GI71995718, Length=366, Percent_Identity=33.0601092896175, Blast_Score=190, Evalue=1e-48, Organism=Caenorhabditis elegans, GI71982858, Length=366, Percent_Identity=31.6939890710383, Blast_Score=189, Evalue=2e-48, Organism=Caenorhabditis elegans, GI115532548, Length=376, Percent_Identity=31.3829787234043, Blast_Score=179, Evalue=2e-45, Organism=Caenorhabditis elegans, GI115532546, Length=376, Percent_Identity=31.3829787234043, Blast_Score=179, Evalue=3e-45, Organism=Caenorhabditis elegans, GI17507641, Length=399, Percent_Identity=32.0802005012531, Blast_Score=172, Evalue=4e-43, Organism=Caenorhabditis elegans, GI17556951, Length=385, Percent_Identity=31.9480519480519, Blast_Score=172, Evalue=4e-43, Organism=Caenorhabditis elegans, GI25148203, Length=475, Percent_Identity=27.5789473684211, Blast_Score=171, Evalue=6e-43, Organism=Caenorhabditis elegans, GI17536099, Length=381, Percent_Identity=30.4461942257218, Blast_Score=171, Evalue=9e-43, Organism=Caenorhabditis elegans, GI17536101, Length=381, Percent_Identity=30.4461942257218, Blast_Score=170, Evalue=1e-42, Organism=Caenorhabditis elegans, GI17505370, Length=333, Percent_Identity=34.2342342342342, Blast_Score=168, Evalue=5e-42, Organism=Caenorhabditis elegans, GI17536103, Length=385, Percent_Identity=30.3896103896104, Blast_Score=168, Evalue=6e-42, Organism=Caenorhabditis elegans, GI17508543, Length=374, Percent_Identity=28.8770053475936, Blast_Score=165, Evalue=5e-41, Organism=Caenorhabditis elegans, GI32564046, Length=377, Percent_Identity=32.6259946949602, Blast_Score=164, Evalue=7e-41, Organism=Caenorhabditis elegans, GI193208216, Length=384, Percent_Identity=31.25, Blast_Score=158, Evalue=5e-39, Organism=Caenorhabditis elegans, GI71990816, Length=385, Percent_Identity=31.6883116883117, Blast_Score=154, Evalue=9e-38, Organism=Caenorhabditis elegans, GI193206561, Length=379, Percent_Identity=28.2321899736148, Blast_Score=150, Evalue=2e-36, Organism=Caenorhabditis elegans, GI17553716, Length=358, Percent_Identity=26.2569832402235, Blast_Score=141, Evalue=9e-34, Organism=Caenorhabditis elegans, GI25148291, Length=434, Percent_Identity=24.4239631336406, Blast_Score=120, Evalue=1e-27, Organism=Caenorhabditis elegans, GI25148205, Length=402, Percent_Identity=26.1194029850746, Blast_Score=120, Evalue=1e-27, Organism=Caenorhabditis elegans, GI71982862, Length=195, Percent_Identity=33.8461538461538, Blast_Score=113, Evalue=3e-25, Organism=Caenorhabditis elegans, GI71997889, Length=373, Percent_Identity=24.9329758713137, Blast_Score=107, Evalue=2e-23, Organism=Caenorhabditis elegans, GI17565430, Length=376, Percent_Identity=25, Blast_Score=100, Evalue=2e-21, Organism=Caenorhabditis elegans, GI71987152, Length=89, Percent_Identity=44.9438202247191, Blast_Score=88, Evalue=1e-17, Organism=Saccharomyces cerevisiae, GI6323021, Length=354, Percent_Identity=38.9830508474576, Blast_Score=247, Evalue=3e-66, Organism=Saccharomyces cerevisiae, GI6321856, Length=370, Percent_Identity=35.1351351351351, Blast_Score=214, Evalue=2e-56, Organism=Saccharomyces cerevisiae, GI6324217, Length=365, Percent_Identity=32.0547945205479, Blast_Score=213, Evalue=5e-56, Organism=Saccharomyces cerevisiae, GI6320224, Length=372, Percent_Identity=32.5268817204301, Blast_Score=213, Evalue=6e-56, Organism=Saccharomyces cerevisiae, GI6320041, Length=364, Percent_Identity=34.6153846153846, Blast_Score=209, Evalue=8e-55, Organism=Saccharomyces cerevisiae, GI6325138, Length=371, Percent_Identity=32.8840970350404, Blast_Score=199, Evalue=8e-52, Organism=Saccharomyces cerevisiae, GI6320119, Length=390, Percent_Identity=33.5897435897436, Blast_Score=197, Evalue=2e-51, Organism=Saccharomyces cerevisiae, GI6322427, Length=354, Percent_Identity=35.5932203389831, Blast_Score=197, Evalue=3e-51, Organism=Saccharomyces cerevisiae, GI6323947, Length=369, Percent_Identity=34.4173441734417, Blast_Score=197, Evalue=4e-51, Organism=Saccharomyces cerevisiae, GI6321360, Length=368, Percent_Identity=32.8804347826087, Blast_Score=197, Evalue=4e-51, Organism=Saccharomyces cerevisiae, GI6322912, Length=361, Percent_Identity=32.6869806094183, Blast_Score=195, Evalue=1e-50, Organism=Saccharomyces cerevisiae, GI6322323, Length=361, Percent_Identity=32.6869806094183, Blast_Score=195, Evalue=1e-50, Organism=Saccharomyces cerevisiae, GI6320449, Length=391, Percent_Identity=32.4808184143223, Blast_Score=192, Evalue=1e-49, Organism=Saccharomyces cerevisiae, GI6324778, Length=361, Percent_Identity=31.3019390581717, Blast_Score=191, Evalue=2e-49, Organism=Saccharomyces cerevisiae, GI6321963, Length=438, Percent_Identity=32.1917808219178, Blast_Score=186, Evalue=8e-48, Organism=Saccharomyces cerevisiae, GI6324620, Length=381, Percent_Identity=29.3963254593176, Blast_Score=183, Evalue=6e-47, Organism=Saccharomyces cerevisiae, GI6319618, Length=411, Percent_Identity=31.6301703163017, Blast_Score=182, Evalue=7e-47, Organism=Saccharomyces cerevisiae, GI6323306, Length=414, Percent_Identity=28.743961352657, Blast_Score=170, Evalue=4e-43, Organism=Saccharomyces cerevisiae, GI6321267, Length=371, Percent_Identity=31.5363881401617, Blast_Score=168, Evalue=2e-42, Organism=Saccharomyces cerevisiae, GI6320173, Length=212, Percent_Identity=42.9245283018868, Blast_Score=166, Evalue=6e-42, Organism=Saccharomyces cerevisiae, GI6319714, Length=447, Percent_Identity=28.1879194630872, Blast_Score=153, Evalue=4e-38, Organism=Saccharomyces cerevisiae, GI6321111, Length=369, Percent_Identity=30.3523035230352, Blast_Score=152, Evalue=1e-37, Organism=Saccharomyces cerevisiae, GI6320400, Length=363, Percent_Identity=30.5785123966942, Blast_Score=149, Evalue=1e-36, Organism=Saccharomyces cerevisiae, GI6324366, Length=355, Percent_Identity=25.9154929577465, Blast_Score=118, Evalue=2e-27, Organism=Saccharomyces cerevisiae, GI6322876, Length=162, Percent_Identity=28.3950617283951, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI21356161, Length=377, Percent_Identity=36.604774535809, Blast_Score=250, Evalue=1e-66, Organism=Drosophila melanogaster, GI24662330, Length=368, Percent_Identity=36.1413043478261, Blast_Score=236, Evalue=3e-62, Organism=Drosophila melanogaster, GI24584399, Length=351, Percent_Identity=37.037037037037, Blast_Score=229, Evalue=2e-60, Organism=Drosophila melanogaster, GI24645031, Length=365, Percent_Identity=33.4246575342466, Blast_Score=223, Evalue=1e-58, Organism=Drosophila melanogaster, GI28574962, Length=350, Percent_Identity=35.4285714285714, Blast_Score=223, Evalue=2e-58, Organism=Drosophila melanogaster, GI28575014, Length=355, Percent_Identity=37.1830985915493, Blast_Score=221, Evalue=9e-58, Organism=Drosophila melanogaster, GI24585582, Length=361, Percent_Identity=34.0720221606648, Blast_Score=219, Evalue=3e-57, Organism=Drosophila melanogaster, GI21355075, Length=372, Percent_Identity=32.7956989247312, Blast_Score=216, Evalue=2e-56, Organism=Drosophila melanogaster, GI24642151, Length=386, Percent_Identity=34.1968911917098, Blast_Score=214, Evalue=1e-55, Organism=Drosophila melanogaster, GI24644483, Length=385, Percent_Identity=34.025974025974, Blast_Score=213, Evalue=2e-55, Organism=Drosophila melanogaster, GI24644479, Length=385, Percent_Identity=34.025974025974, Blast_Score=213, Evalue=2e-55, Organism=Drosophila melanogaster, GI24644487, Length=385, Percent_Identity=34.025974025974, Blast_Score=213, Evalue=2e-55, Organism=Drosophila melanogaster, GI45551833, Length=385, Percent_Identity=34.025974025974, Blast_Score=213, Evalue=2e-55, Organism=Drosophila melanogaster, GI24644485, Length=385, Percent_Identity=34.025974025974, Blast_Score=213, Evalue=2e-55, Organism=Drosophila melanogaster, GI281361218, Length=385, Percent_Identity=34.025974025974, Blast_Score=213, Evalue=2e-55, Organism=Drosophila melanogaster, GI24644481, Length=385, Percent_Identity=34.025974025974, Blast_Score=213, Evalue=2e-55, Organism=Drosophila melanogaster, GI24584994, Length=384, Percent_Identity=33.8541666666667, Blast_Score=209, Evalue=3e-54, Organism=Drosophila melanogaster, GI18857967, Length=377, Percent_Identity=31.5649867374005, Blast_Score=206, Evalue=2e-53, Organism=Drosophila melanogaster, GI17985987, Length=372, Percent_Identity=34.6774193548387, Blast_Score=200, Evalue=1e-51, Organism=Drosophila melanogaster, GI24583279, Length=363, Percent_Identity=31.404958677686, Blast_Score=197, Evalue=1e-50, Organism=Drosophila melanogaster, GI24583281, Length=363, Percent_Identity=31.404958677686, Blast_Score=197, Evalue=1e-50, Organism=Drosophila melanogaster, GI17977678, Length=358, Percent_Identity=31.8435754189944, Blast_Score=197, Evalue=1e-50, Organism=Drosophila melanogaster, GI24581954, Length=364, Percent_Identity=32.4175824175824, Blast_Score=197, Evalue=2e-50, Organism=Drosophila melanogaster, GI24581952, Length=364, Percent_Identity=32.4175824175824, Blast_Score=197, Evalue=2e-50, Organism=Drosophila melanogaster, GI24581956, Length=364, Percent_Identity=32.4175824175824, Blast_Score=197, Evalue=2e-50, Organism=Drosophila melanogaster, GI17136814, Length=387, Percent_Identity=33.3333333333333, Blast_Score=190, Evalue=2e-48, Organism=Drosophila melanogaster, GI24666101, Length=439, Percent_Identity=31.4350797266515, Blast_Score=187, Evalue=2e-47, Organism=Drosophila melanogaster, GI281365720, Length=311, Percent_Identity=34.4051446945338, Blast_Score=182, Evalue=3e-46, Organism=Drosophila melanogaster, GI24582080, Length=361, Percent_Identity=31.3019390581717, Blast_Score=182, Evalue=4e-46, Organism=Drosophila melanogaster, GI24582078, Length=361, Percent_Identity=31.3019390581717, Blast_Score=182, Evalue=4e-46, Organism=Drosophila melanogaster, GI17136248, Length=361, Percent_Identity=31.3019390581717, Blast_Score=182, Evalue=4e-46, Organism=Drosophila melanogaster, GI24582075, Length=361, Percent_Identity=31.3019390581717, Blast_Score=182, Evalue=4e-46, Organism=Drosophila melanogaster, GI24642822, Length=361, Percent_Identity=33.5180055401662, Blast_Score=176, Evalue=4e-44, Organism=Drosophila melanogaster, GI28571808, Length=361, Percent_Identity=31.0249307479224, Blast_Score=171, Evalue=8e-43, Organism=Drosophila melanogaster, GI28571809, Length=361, Percent_Identity=31.0249307479224, Blast_Score=171, Evalue=8e-43, Organism=Drosophila melanogaster, GI20130173, Length=456, Percent_Identity=26.9736842105263, Blast_Score=165, Evalue=6e-41, Organism=Drosophila melanogaster, GI24643725, Length=396, Percent_Identity=30.3030303030303, Blast_Score=157, Evalue=1e-38, Organism=Drosophila melanogaster, GI21355559, Length=364, Percent_Identity=31.3186813186813, Blast_Score=156, Evalue=3e-38, Organism=Drosophila melanogaster, GI17647335, Length=359, Percent_Identity=27.5766016713092, Blast_Score=155, Evalue=4e-38, Organism=Drosophila melanogaster, GI17136666, Length=418, Percent_Identity=29.6650717703349, Blast_Score=138, Evalue=6e-33, Organism=Drosophila melanogaster, GI19920478, Length=354, Percent_Identity=29.3785310734463, Blast_Score=130, Evalue=2e-30, Organism=Drosophila melanogaster, GI24668515, Length=352, Percent_Identity=27.5568181818182, Blast_Score=118, Evalue=7e-27, Organism=Drosophila melanogaster, GI24640164, Length=373, Percent_Identity=24.9329758713137, Blast_Score=116, Evalue=3e-26, Organism=Drosophila melanogaster, GI18859659, Length=200, Percent_Identity=32.5, Blast_Score=93, Evalue=3e-19, Organism=Drosophila melanogaster, GI28571338, Length=200, Percent_Identity=32.5, Blast_Score=93, Evalue=3e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 50051; Mature: 49920
Theoretical pI: Translated: 10.29; Mature: 10.29
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLATFQDFDLAPALLKALAKKGYTRPTAIQQETIPAAMEQRDVLGSAPTGTGKTAAFLL CCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH PAIQHLLDYPRRKPGAPRILILTPTRELAMQVAEQAESFAEFTNLSIATITGGVAYQNHG HHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCEEEEEECCEEECCCC EIFNSNQDIVVATPGRLLQYIKEENFDCRSVEMLIFDEADRMLQMGFGQDAEKIAAETRW CEECCCCCEEEECHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHCCCCCHHHHHHHHHH RKQTLLFSATLEGELLVDFASRLLTEPVQIDAEPSRRERKKIQQWYYHADSNEHKIKLLA HHHHEEEEECCCCHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHH RFIDEEQVSRGIVFVRRREEVRELSETLRKRGIRSTYLEGEMAQTQRNNAIDKLKNGIVT HHHHHHHHHCCCEEEHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHCCCEEE VLVATDVAARGIDIEDVSHVMNFDLPYSADTYLHRIGRTARAGKKGVAVSFVEAHDYKLL EEEEHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHH GKIKRYTQELLKARIIEGLAPRTKAPKEGEVKTVSKKQKARIKAKREEKQKQEQKKKVKL HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RHKDTKNIGKRRKSNTPPANAE HCCCHHHHHHHCCCCCCCCCCC >Mature Secondary Structure TLATFQDFDLAPALLKALAKKGYTRPTAIQQETIPAAMEQRDVLGSAPTGTGKTAAFLL CCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH PAIQHLLDYPRRKPGAPRILILTPTRELAMQVAEQAESFAEFTNLSIATITGGVAYQNHG HHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCEEEEEECCEEECCCC EIFNSNQDIVVATPGRLLQYIKEENFDCRSVEMLIFDEADRMLQMGFGQDAEKIAAETRW CEECCCCCEEEECHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHCCCCCHHHHHHHHHH RKQTLLFSATLEGELLVDFASRLLTEPVQIDAEPSRRERKKIQQWYYHADSNEHKIKLLA HHHHEEEEECCCCHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHH RFIDEEQVSRGIVFVRRREEVRELSETLRKRGIRSTYLEGEMAQTQRNNAIDKLKNGIVT HHHHHHHHHCCCEEEHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHCCCEEE VLVATDVAARGIDIEDVSHVMNFDLPYSADTYLHRIGRTARAGKKGVAVSFVEAHDYKLL EEEEHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHH GKIKRYTQELLKARIIEGLAPRTKAPKEGEVKTVSKKQKARIKAKREEKQKQEQKKKVKL HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RHKDTKNIGKRRKSNTPPANAE HCCCHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]