| Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
|---|---|
| Accession | NC_002663 |
| Length | 2,257,487 |
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The map label for this gene is 15603663
Identifier: 15603663
GI number: 15603663
Start: 2024411
End: 2025004
Strand: Reverse
Name: 15603663
Synonym: PM1798
Alternate gene names: NA
Gene position: 2025004-2024411 (Counterclockwise)
Preceding gene: 15603664
Following gene: 15603662
Centisome position: 89.7
GC content: 37.21
Gene sequence:
>594_bases ATGTGCAAGAGATTGGCTAATATAGACTTTCACAGTATAATCAATGATCAATGCACTGGACTGAACAAGGAACTCATTAT GTTAAAGTCACTCTCTCTTATCAGCTTAATCACGCTACTTAGCGCGTGTTCAATGTCTTCTTATGTGCCTTTTATGAATG ATAAAAAAGCGGTGATTGATTTAGATAAAACACAAATTGATCAAAAATCTTATGCGACAGCCTATGAAGCGACGCTTGCT ACCTATAAAGGACGAGTGAATCAAGATTATGATGTGCACTCATTTAGTAGCGGTGCAAATGATTGGTATTTAAATCGTAT TTTATTGCCGATTGACAAAATCAAAGAGAACCTTTATCAAGGTGGGCATGACTCGAATATTCACGCTTACTATAGTGGTG TCGTGTTTGCCTCCGCTTTACAAAGCAACTTTAACAAGCTTAACCCAAATTGTTGGTCATATTTAGATGCGCCTAGTGTC ACACAAGGCATATATGATGCAATGAAAGATCTCCAAAAAGGCAAACAAAGGGCTGAAGATGACCCTTATATTGTCCAAGG TTCTGAACAATTATTAAAACGTTGTGCCCAATAA
Upstream 100 bases:
>100_bases AGCGGTCGATTTCTCAGCGACGCCAGATGCCTTTAAAAATATCAACAACTTAGTCGATCTGCAGACGTAAACCACATCCC CATACTTTATCTGCTAAAAG
Downstream 100 bases:
>100_bases AGTGAAAAACTGTTGATGTGAAAATCAGCAGTTTTTTTCGCTTTTGGCAATAAAGAGAAAGATGACATTTTCTCGACATA TGCATGATCTATAATGAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 197; Mature: 197
Protein sequence:
>197_residues MCKRLANIDFHSIINDQCTGLNKELIMLKSLSLISLITLLSACSMSSYVPFMNDKKAVIDLDKTQIDQKSYATAYEATLA TYKGRVNQDYDVHSFSSGANDWYLNRILLPIDKIKENLYQGGHDSNIHAYYSGVVFASALQSNFNKLNPNCWSYLDAPSV TQGIYDAMKDLQKGKQRAEDDPYIVQGSEQLLKRCAQ
Sequences:
>Translated_197_residues MCKRLANIDFHSIINDQCTGLNKELIMLKSLSLISLITLLSACSMSSYVPFMNDKKAVIDLDKTQIDQKSYATAYEATLA TYKGRVNQDYDVHSFSSGANDWYLNRILLPIDKIKENLYQGGHDSNIHAYYSGVVFASALQSNFNKLNPNCWSYLDAPSV TQGIYDAMKDLQKGKQRAEDDPYIVQGSEQLLKRCAQ >Mature_197_residues MCKRLANIDFHSIINDQCTGLNKELIMLKSLSLISLITLLSACSMSSYVPFMNDKKAVIDLDKTQIDQKSYATAYEATLA TYKGRVNQDYDVHSFSSGANDWYLNRILLPIDKIKENLYQGGHDSNIHAYYSGVVFASALQSNFNKLNPNCWSYLDAPSV TQGIYDAMKDLQKGKQRAEDDPYIVQGSEQLLKRCAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22197; Mature: 22197
Theoretical pI: Translated: 6.91; Mature: 6.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCKRLANIDFHSIINDQCTGLNKELIMLKSLSLISLITLLSACSMSSYVPFMNDKKAVID CCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEE LDKTQIDQKSYATAYEATLATYKGRVNQDYDVHSFSSGANDWYLNRILLPIDKIKENLYQ CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHC GGHDSNIHAYYSGVVFASALQSNFNKLNPNCWSYLDAPSVTQGIYDAMKDLQKGKQRAED CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC DPYIVQGSEQLLKRCAQ CCEEEECHHHHHHHHCC >Mature Secondary Structure MCKRLANIDFHSIINDQCTGLNKELIMLKSLSLISLITLLSACSMSSYVPFMNDKKAVID CCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEE LDKTQIDQKSYATAYEATLATYKGRVNQDYDVHSFSSGANDWYLNRILLPIDKIKENLYQ CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHC GGHDSNIHAYYSGVVFASALQSNFNKLNPNCWSYLDAPSVTQGIYDAMKDLQKGKQRAED CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC DPYIVQGSEQLLKRCAQ CCEEEECHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]