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The map label for this gene is rseB [H]

Identifier: 15603652

GI number: 15603652

Start: 2011413

End: 2012366

Strand: Reverse

Name: rseB [H]

Synonym: PM1787

Alternate gene names: 15603652

Gene position: 2012366-2011413 (Counterclockwise)

Preceding gene: 15603653

Following gene: 15603651

Centisome position: 89.14

GC content: 39.1

Gene sequence:

>954_bases
ATGTTTAAAGCACTGCAAAAATCTCTCACCTTTTTCTTGCTCGCGCTCTGCTCATTTAACACATTTGCAGAAGAAAGCCT
GTCGGCCAAACAAATTCTACTCAAAATGCCAGAAGCGCGCGAAAAACTCAGCTATGAAATTGCTTTTGTAAAAACAACAC
CCGCCAATATGGATTCTTTACGTTATCGTCATCTTCATATTGATGGTAAATCCTATGCGCAGTTAGTGACTCTAGACGGT
GTCCAACAAGAAATTGTGCTCAGGGATAATTTAGTCAGCTATTTCCAGCCGAATTTCCAACCTTTTACGATTCATAGCGC
CCAAATCATTGACAGTTTACCGGCACTGATGAATGCCAATTTTGAACGGTTAGAAAAATACTATGATTTTGTCAAAATGG
GGCGCAATCGTGTTGCTAACCGCCTTGTGCAAACAATTCGTATTTTGCCAAAAGATGATTTCCGTTACCAATATGTCGCC
TTTATTGATGAAGAAAATCATTTGCTACTACAAAGTGACATTCTCGATCGCGATGGTAACTTATTAGATCAATTTCGTGT
CGTCAATCTGTATATTGGCGATGGCTTACAAGGTTTAGCCGAATATCTCGAAAATATTGTGTTCCCACCATTACTGATTG
ATAAAAAAGAAGAGACAACGCCAACATTCCACTGGCAAACCAGCTGGTTACCACAGGGGTTTGTCAAGATAAATCAAGCT
GTGGGATTAGACGATGAACGCCATATTGAAAGCCAATTATACAGTGACGGGTTATTCTCTTTTACGCTTTATGTGTCTGA
TCCGATTGCTGAGGTCAATTTAGATAATACGTGGAAACAAGGAACTTATACGATTTACAGTGAAATGATCAATGGCAAAG
AAATTACCTTTGTTGGTCAATTACCGATTTCCACCGCAAAACGTATCGTGCAAGATATTCAGTTCAAAAAGTAA

Upstream 100 bases:

>100_bases
CTCTTTAATCTTAAATCAGCAAAACACACAAAAATAATGTTTTTCGTTAATTCACCTTCACCACCTTTATAGGTGGTGAA
TTTGTTTTATGGTGGCAACT

Downstream 100 bases:

>100_bases
GGCATAACATGTTAAAAGAAACAGCCATTGTGATTGACTACCAATCCGGCATGGCAAAAGTAAAATGTCAATCACAAAGT
GCTTGTGGAGCTTGTGCAGC

Product: periplasmic negative regulator of sigmaE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MFKALQKSLTFFLLALCSFNTFAEESLSAKQILLKMPEAREKLSYEIAFVKTTPANMDSLRYRHLHIDGKSYAQLVTLDG
VQQEIVLRDNLVSYFQPNFQPFTIHSAQIIDSLPALMNANFERLEKYYDFVKMGRNRVANRLVQTIRILPKDDFRYQYVA
FIDEENHLLLQSDILDRDGNLLDQFRVVNLYIGDGLQGLAEYLENIVFPPLLIDKKEETTPTFHWQTSWLPQGFVKINQA
VGLDDERHIESQLYSDGLFSFTLYVSDPIAEVNLDNTWKQGTYTIYSEMINGKEITFVGQLPISTAKRIVQDIQFKK

Sequences:

>Translated_317_residues
MFKALQKSLTFFLLALCSFNTFAEESLSAKQILLKMPEAREKLSYEIAFVKTTPANMDSLRYRHLHIDGKSYAQLVTLDG
VQQEIVLRDNLVSYFQPNFQPFTIHSAQIIDSLPALMNANFERLEKYYDFVKMGRNRVANRLVQTIRILPKDDFRYQYVA
FIDEENHLLLQSDILDRDGNLLDQFRVVNLYIGDGLQGLAEYLENIVFPPLLIDKKEETTPTFHWQTSWLPQGFVKINQA
VGLDDERHIESQLYSDGLFSFTLYVSDPIAEVNLDNTWKQGTYTIYSEMINGKEITFVGQLPISTAKRIVQDIQFKK
>Mature_317_residues
MFKALQKSLTFFLLALCSFNTFAEESLSAKQILLKMPEAREKLSYEIAFVKTTPANMDSLRYRHLHIDGKSYAQLVTLDG
VQQEIVLRDNLVSYFQPNFQPFTIHSAQIIDSLPALMNANFERLEKYYDFVKMGRNRVANRLVQTIRILPKDDFRYQYVA
FIDEENHLLLQSDILDRDGNLLDQFRVVNLYIGDGLQGLAEYLENIVFPPLLIDKKEETTPTFHWQTSWLPQGFVKINQA
VGLDDERHIESQLYSDGLFSFTLYVSDPIAEVNLDNTWKQGTYTIYSEMINGKEITFVGQLPISTAKRIVQDIQFKK

Specific function: Seems to modulate the activity of rpoE (sigma-E) [H]

COG id: COG3026

COG function: function code T; Negative regulator of sigma E activity

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rseB family [H]

Homologues:

Organism=Escherichia coli, GI1788924, Length=312, Percent_Identity=37.8205128205128, Blast_Score=237, Evalue=9e-64,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005588 [H]

Pfam domain/function: PF03888 MucB_RseB [H]

EC number: NA

Molecular weight: Translated: 36748; Mature: 36748

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKALQKSLTFFLLALCSFNTFAEESLSAKQILLKMPEAREKLSYEIAFVKTTPANMDSL
CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHCEEEEEEEEECCCCCCCC
RYRHLHIDGKSYAQLVTLDGVQQEIVLRDNLVSYFQPNFQPFTIHSAQIIDSLPALMNAN
EEEEEEECCCHHEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHCCC
FERLEKYYDFVKMGRNRVANRLVQTIRILPKDDFRYQYVAFIDEENHLLLQSDILDRDGN
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCEEEECCCCCCCCC
LLDQFRVVNLYIGDGLQGLAEYLENIVFPPLLIDKKEETTPTFHWQTSWLPQGFVKINQA
HHHHEEEEEEEECCCHHHHHHHHHHHCCCCEEECCCCCCCCEEEEECCCCCCHHHHHHHH
VGLDDERHIESQLYSDGLFSFTLYVSDPIAEVNLDNTWKQGTYTIYSEMINGKEITFVGQ
CCCCHHHHHHHHHHCCCCEEEEEEECCCCEECCCCCCCCCCHHHHHHHHCCCCEEEEEEC
LPISTAKRIVQDIQFKK
CCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MFKALQKSLTFFLLALCSFNTFAEESLSAKQILLKMPEAREKLSYEIAFVKTTPANMDSL
CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHCEEEEEEEEECCCCCCCC
RYRHLHIDGKSYAQLVTLDGVQQEIVLRDNLVSYFQPNFQPFTIHSAQIIDSLPALMNAN
EEEEEEECCCHHEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHCCC
FERLEKYYDFVKMGRNRVANRLVQTIRILPKDDFRYQYVAFIDEENHLLLQSDILDRDGN
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCEEEECCCCCCCCC
LLDQFRVVNLYIGDGLQGLAEYLENIVFPPLLIDKKEETTPTFHWQTSWLPQGFVKINQA
HHHHEEEEEEEECCCHHHHHHHHHHHCCCCEEECCCCCCCCEEEEECCCCCCHHHHHHHH
VGLDDERHIESQLYSDGLFSFTLYVSDPIAEVNLDNTWKQGTYTIYSEMINGKEITFVGQ
CCCCHHHHHHHHHHCCCCEEEEEEECCCCEECCCCCCCCCCHHHHHHHHCCCCEEEEEEC
LPISTAKRIVQDIQFKK
CCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]