Click here to switch to the map view.

The map label for this gene is rseC [C]

Identifier: 15603651

GI number: 15603651

Start: 2010973

End: 2011404

Strand: Reverse

Name: rseC [C]

Synonym: PM1786

Alternate gene names: 15603651

Gene position: 2011404-2010973 (Counterclockwise)

Preceding gene: 15603652

Following gene: 15603650

Centisome position: 89.1

GC content: 40.51

Gene sequence:

>432_bases
ATGTTAAAAGAAACAGCCATTGTGATTGACTACCAATCCGGCATGGCAAAAGTAAAATGTCAATCACAAAGTGCTTGTGG
AGCTTGTGCAGCACAAAACGCCTGTGGCGCCTCCGCTCTCTCTGAACTCACTGGAGAAAAGGGAGAGCACATTTTTTGGA
TTGAAACCATTACTCCACTAAAAGTGGGGCAACGGGTTGAAATTGGTTTAGAAGAGCGTTCGTTAATTTTCTCCGCGCTC
ATCATTTATATTGTTCCTCTACTTACTATTCTCGTCAGCACGTTTCTCGCGGAAAAACTGTTCTCTCATGAATTAATCAG
CGCTTTATTTATCTTTATTTGCACAGCATTGTCCTTTCTCGCCATTCGCACATACAGTAAAAGGTTAAAGAAGAAACACC
ACTACCAACCTATTTTATTAAGAGTTTTGTAA

Upstream 100 bases:

>100_bases
AAATGATCAATGGCAAAGAAATTACCTTTGTTGGTCAATTACCGATTTCCACCGCAAAACGTATCGTGCAAGATATTCAG
TTCAAAAAGTAAGGCATAAC

Downstream 100 bases:

>100_bases
TCTTAACGAATCCTTTATAATGCACAGAAATTTAAAAATAGGATAATTTTATGCCGTTTATGTTAGGTATTACAGGCTAT
AGTGGAAGTGGCAAAACCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MLKETAIVIDYQSGMAKVKCQSQSACGACAAQNACGASALSELTGEKGEHIFWIETITPLKVGQRVEIGLEERSLIFSAL
IIYIVPLLTILVSTFLAEKLFSHELISALFIFICTALSFLAIRTYSKRLKKKHHYQPILLRVL

Sequences:

>Translated_143_residues
MLKETAIVIDYQSGMAKVKCQSQSACGACAAQNACGASALSELTGEKGEHIFWIETITPLKVGQRVEIGLEERSLIFSAL
IIYIVPLLTILVSTFLAEKLFSHELISALFIFICTALSFLAIRTYSKRLKKKHHYQPILLRVL
>Mature_143_residues
MLKETAIVIDYQSGMAKVKCQSQSACGACAAQNACGASALSELTGEKGEHIFWIETITPLKVGQRVEIGLEERSLIFSAL
IIYIVPLLTILVSTFLAEKLFSHELISALFIFICTALSFLAIRTYSKRLKKKHHYQPILLRVL

Specific function: Seems To Modulate The Activity Of Rpoe (Sigma-E). [C]

COG id: COG3086

COG function: function code T; Positive regulator of sigma E activity

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rseC family [H]

Homologues:

Organism=Escherichia coli, GI1788923, Length=142, Percent_Identity=33.8028169014084, Blast_Score=95, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007359 [H]

Pfam domain/function: PF04246 RseC_MucC [H]

EC number: NA

Molecular weight: Translated: 15873; Mature: 15873

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKETAIVIDYQSGMAKVKCQSQSACGACAAQNACGASALSELTGEKGEHIFWIETITPL
CCCCCEEEEEECCCCCEEEECCCCHHHHHHHCCCCCHHHHHHHCCCCCCEEEEEECCCCH
KVGQRVEIGLEERSLIFSALIIYIVPLLTILVSTFLAEKLFSHELISALFIFICTALSFL
HCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIRTYSKRLKKKHHYQPILLRVL
HHHHHHHHHHHHHCCCHHHEEEC
>Mature Secondary Structure
MLKETAIVIDYQSGMAKVKCQSQSACGACAAQNACGASALSELTGEKGEHIFWIETITPL
CCCCCEEEEEECCCCCEEEECCCCHHHHHHHCCCCCHHHHHHHCCCCCCEEEEEECCCCH
KVGQRVEIGLEERSLIFSALIIYIVPLLTILVSTFLAEKLFSHELISALFIFICTALSFL
HCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIRTYSKRLKKKHHYQPILLRVL
HHHHHHHHHHHHHCCCHHHEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]