| Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
|---|---|
| Accession | NC_002663 |
| Length | 2,257,487 |
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The map label for this gene is yhaZ [H]
Identifier: 15603615
GI number: 15603615
Start: 1972519
End: 1973256
Strand: Reverse
Name: yhaZ [H]
Synonym: PM1750
Alternate gene names: 15603615
Gene position: 1973256-1972519 (Counterclockwise)
Preceding gene: 15603616
Following gene: 15603614
Centisome position: 87.41
GC content: 35.77
Gene sequence:
>738_bases ATGGCTAAAAAACTCAAAGATTATTATGATGTGGAATATTTGAAGCACTTGTCCAATTTACTTACAAAGGAATCTCCCTC TTTCGATCAGGATCGATTTTTAGATTTAACCAAGTCAATTCATGAACTGGAATTTAGTCAAAGACAGGAACGGATTGCAA CAGCACTTTATGAAGCGTTTGATTTGAGTTATGAAGAGACCCTTTCCGTATTTTATAAAATATTAGGCCCGATATTGAAA GGAAACAGTGGCGCGTTTACGGAAGGTTGGTGGCTATGGCCAATCGGAAGATATGTAGAAATTTACGGAGACAGTCATTT TGAAGTAAGCGTAAATTTCAGCAAAGCGCTTACCAAGCGATTTACCTCGGAGTACTGCATGCGCATGCTCATTAAAAAAT ACCCGGAAGAATCTATGAAAATTCTACTGGACTGGAGTACGGACGAGAATGAAAGAGTGAGAAGACTTTCCTCTGAGTGC CTAAGAATACGATTACCTTGGGCAAAAAAATTATATACGGCATTGGAATATTTTGATCAATATTTTGAAATACTAAGTAA CCTAAAAGATGACAAAGATAAATACATTCAAAAAAGTGTCGCCAATAATTTAAACGACTTATACAAAGAGAAGTCAGAAA AGTTTTATGAAATTATCAATGCTTGGGAAAAGGAAGAAATGAGTAAGGAATGCCGTTGGGTCATAAAACATGGTTCACGC AATGTAGCAAAAAATTAA
Upstream 100 bases:
>100_bases AATTTTTTAGCAACAACGGGATTAAGATTAAACTTACTTTAATGGAAACGAGTGGATAGTGAGAATTCGATTAGGATGCT GCTAGAAGGAATAATAGAAA
Downstream 100 bases:
>100_bases ACACGCTGAACATTGGTTCCAAAGCTTGAGCGGGCAGCTGAAGGTAAAATTTGAAACGCGGTTTAAAGCACAGCAGATCA AAGAGATTATCTTAAAATGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 245; Mature: 244
Protein sequence:
>245_residues MAKKLKDYYDVEYLKHLSNLLTKESPSFDQDRFLDLTKSIHELEFSQRQERIATALYEAFDLSYEETLSVFYKILGPILK GNSGAFTEGWWLWPIGRYVEIYGDSHFEVSVNFSKALTKRFTSEYCMRMLIKKYPEESMKILLDWSTDENERVRRLSSEC LRIRLPWAKKLYTALEYFDQYFEILSNLKDDKDKYIQKSVANNLNDLYKEKSEKFYEIINAWEKEEMSKECRWVIKHGSR NVAKN
Sequences:
>Translated_245_residues MAKKLKDYYDVEYLKHLSNLLTKESPSFDQDRFLDLTKSIHELEFSQRQERIATALYEAFDLSYEETLSVFYKILGPILK GNSGAFTEGWWLWPIGRYVEIYGDSHFEVSVNFSKALTKRFTSEYCMRMLIKKYPEESMKILLDWSTDENERVRRLSSEC LRIRLPWAKKLYTALEYFDQYFEILSNLKDDKDKYIQKSVANNLNDLYKEKSEKFYEIINAWEKEEMSKECRWVIKHGSR NVAKN >Mature_244_residues AKKLKDYYDVEYLKHLSNLLTKESPSFDQDRFLDLTKSIHELEFSQRQERIATALYEAFDLSYEETLSVFYKILGPILKG NSGAFTEGWWLWPIGRYVEIYGDSHFEVSVNFSKALTKRFTSEYCMRMLIKKYPEESMKILLDWSTDENERVRRLSSECL RIRLPWAKKLYTALEYFDQYFEILSNLKDDKDKYIQKSVANNLNDLYKEKSEKFYEIINAWEKEEMSKECRWVIKHGSRN VAKN
Specific function: Unknown
COG id: COG4335
COG function: function code L; DNA alkylation repair enzyme
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HEAT repeat [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011989 - InterPro: IPR016024 - InterPro: IPR000357 - InterPro: IPR021133 [H]
Pfam domain/function: PF02985 HEAT [H]
EC number: NA
Molecular weight: Translated: 29377; Mature: 29246
Theoretical pI: Translated: 6.94; Mature: 6.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKKLKDYYDVEYLKHLSNLLTKESPSFDQDRFLDLTKSIHELEFSQRQERIATALYEAF CCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DLSYEETLSVFYKILGPILKGNSGAFTEGWWLWPIGRYVEIYGDSHFEVSVNFSKALTKR CCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCHHHHHEEECCCEEEEEECHHHHHHHH FTSEYCMRMLIKKYPEESMKILLDWSTDENERVRRLSSECLRIRLPWAKKLYTALEYFDQ HHHHHHHHHHHHHCCHHHHEEEEECCCCHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHH YFEILSNLKDDKDKYIQKSVANNLNDLYKEKSEKFYEIINAWEKEEMSKECRWVIKHGSR HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC NVAKN CCCCC >Mature Secondary Structure AKKLKDYYDVEYLKHLSNLLTKESPSFDQDRFLDLTKSIHELEFSQRQERIATALYEAF CCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DLSYEETLSVFYKILGPILKGNSGAFTEGWWLWPIGRYVEIYGDSHFEVSVNFSKALTKR CCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCHHHHHEEECCCEEEEEECHHHHHHHH FTSEYCMRMLIKKYPEESMKILLDWSTDENERVRRLSSECLRIRLPWAKKLYTALEYFDQ HHHHHHHHHHHHHCCHHHHEEEEECCCCHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHH YFEILSNLKDDKDKYIQKSVANNLNDLYKEKSEKFYEIINAWEKEEMSKECRWVIKHGSR HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC NVAKN CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]