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The map label for this gene is ygfA [C]

Identifier: 15603586

GI number: 15603586

Start: 1931440

End: 1932012

Strand: Reverse

Name: ygfA [C]

Synonym: PM1721

Alternate gene names: 15603586

Gene position: 1932012-1931440 (Counterclockwise)

Preceding gene: 15603587

Following gene: 15603584

Centisome position: 85.58

GC content: 40.66

Gene sequence:

>573_bases
ATGAATACTGATTCTCTGCTTCGCCAAAAAATTCGAAATGACATTCGAAAACGTCGTCAAAAACTCACCGCACTTGAGCA
ACAACAAGCCGAACAGTCTATTACACAACAAGCATTGCAGCTGATTACACAGAAAAAAGCAAACACAGTAGCGCTTTATT
TATCTTTCGATGGAGAAGTATCTACTCAGCAGCTCATTACGTGTTTATGGCAGCAAGGCATACAAGTTGCTGTACCTGTT
TTGCATCCTTTTTGTCCGGGGCATTTGTTGTTTTTACGCTATCATCCAGAATCGGTTATGTATAAGAATTCATTTGGTAT
TTTAGAACCTCAACTCAATGTTCAAGACGTTGTGCCAATAAGCGCGCTAGAGATAATTTTTACGCCTCTTGTTGCTTTCG
ATAAACAAGGTAATCGTCTTGGAATGGGCGGGGGATTTTATGATCGCACGTTACAAGGTTGGCAGGAAAAATCCTTTATC
CCTGTAGGACTTGCACATGCCTGTCAATTTGTTGAGCATTTACCTAGCCAAGCTTGGGATATGCCACTTGCACAGATTTT
GATTGCAGAATAA

Upstream 100 bases:

>100_bases
AGAAGCCTAAAAATAGTTATAACTGATTCCCTTGAACCGTTGGGTTCAAGGACTGAGACTTGCAGCGGCATCTCGGGTTC
TTCCCTTACAACCAATATCC

Downstream 100 bases:

>100_bases
ATGACATAAAAAAATAGGACAAAGTGTAACGCTCGTCCTATTTTTAAATCATGATTTATTGTTTTAATAAGCCTTCAGGC
TCCGCCGGTTTTTCGATTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MNTDSLLRQKIRNDIRKRRQKLTALEQQQAEQSITQQALQLITQKKANTVALYLSFDGEVSTQQLITCLWQQGIQVAVPV
LHPFCPGHLLFLRYHPESVMYKNSFGILEPQLNVQDVVPISALEIIFTPLVAFDKQGNRLGMGGGFYDRTLQGWQEKSFI
PVGLAHACQFVEHLPSQAWDMPLAQILIAE

Sequences:

>Translated_190_residues
MNTDSLLRQKIRNDIRKRRQKLTALEQQQAEQSITQQALQLITQKKANTVALYLSFDGEVSTQQLITCLWQQGIQVAVPV
LHPFCPGHLLFLRYHPESVMYKNSFGILEPQLNVQDVVPISALEIIFTPLVAFDKQGNRLGMGGGFYDRTLQGWQEKSFI
PVGLAHACQFVEHLPSQAWDMPLAQILIAE
>Mature_190_residues
MNTDSLLRQKIRNDIRKRRQKLTALEQQQAEQSITQQALQLITQKKANTVALYLSFDGEVSTQQLITCLWQQGIQVAVPV
LHPFCPGHLLFLRYHPESVMYKNSFGILEPQLNVQDVVPISALEIIFTPLVAFDKQGNRLGMGGGFYDRTLQGWQEKSFI
PVGLAHACQFVEHLPSQAWDMPLAQILIAE

Specific function: Unknown

COG id: COG0212

COG function: function code H; 5-formyltetrahydrofolate cyclo-ligase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 5-formyltetrahydrofolate cyclo-ligase family [H]

Homologues:

Organism=Homo sapiens, GI5453746, Length=192, Percent_Identity=27.6041666666667, Blast_Score=79, Evalue=3e-15,
Organism=Escherichia coli, GI1789278, Length=173, Percent_Identity=53.1791907514451, Blast_Score=192, Evalue=9e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002698 [H]

Pfam domain/function: PF01812 5-FTHF_cyc-lig [H]

EC number: NA

Molecular weight: Translated: 21541; Mature: 21541

Theoretical pI: Translated: 7.56; Mature: 7.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTDSLLRQKIRNDIRKRRQKLTALEQQQAEQSITQQALQLITQKKANTVALYLSFDGEV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCC
STQQLITCLWQQGIQVAVPVLHPFCPGHLLFLRYHPESVMYKNSFGILEPQLNVQDVVPI
CHHHHHHHHHHCCCEEEHHHHCCCCCCEEEEEEECCCHHEEECCCCCCCCCCCHHHCCCH
SALEIIFTPLVAFDKQGNRLGMGGGFYDRTLQGWQEKSFIPVGLAHACQFVEHLPSQAWD
HHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHC
MPLAQILIAE
CCHHHHHCCC
>Mature Secondary Structure
MNTDSLLRQKIRNDIRKRRQKLTALEQQQAEQSITQQALQLITQKKANTVALYLSFDGEV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCC
STQQLITCLWQQGIQVAVPVLHPFCPGHLLFLRYHPESVMYKNSFGILEPQLNVQDVVPI
CHHHHHHHHHHCCCEEEHHHHCCCCCCEEEEEEECCCHHEEECCCCCCCCCCCHHHCCCH
SALEIIFTPLVAFDKQGNRLGMGGGFYDRTLQGWQEKSFIPVGLAHACQFVEHLPSQAWD
HHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHC
MPLAQILIAE
CCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]