Click here to switch to the map view.

The map label for this gene is dsbD_2 [C]

Identifier: 15603571

GI number: 15603571

Start: 1913905

End: 1914633

Strand: Direct

Name: dsbD_2 [C]

Synonym: PM1706

Alternate gene names: 15603571

Gene position: 1913905-1914633 (Clockwise)

Preceding gene: 15603570

Following gene: 15603575

Centisome position: 84.78

GC content: 44.86

Gene sequence:

>729_bases
ATGGATATCAGTGTCACCGTTTTAGGCTTAAGTTTACTGGCAGGATTGCTTACTACTCTTTCCCCATGTGTTTTACCTAT
TCTGCCAATTGTCGCCTCTTCCGCCATGGCAAAACGGAAAGTCGGCTTATTTACCCTAGCCTTTGGTATGGCAATTTCTT
TTACCCTAGTTGGTACGGTCATTGCGTCTATCGGTTTAGCATTAGGTCTCAATAGCGAATATTTACGTTATGGCGCGGCG
ATCTTGATGCTGTTAGTCGCCTTCTGGCTACTCAGCTCACGCTTACAAGCCTTGTTGAGTCGCTACACATCACTGCTCAC
TGGAAAAGGGGAAGCTTGGTTAAGTGGCTTTAACCCAGAGTCCGCGACAGGACAATTTTTTGTTGGTTTATTGCTAGGTA
TTGTTTGGGCACCTTGTATTGGTCCAACTTTAGGTGCCGCAATAGCGCTTGCTAGCCAAGGAGAAGCCCTTGCCAGTGTA
GCAATTGTGATGGTGATCTTCAGCTTAGGCGCGGTGATTCCATTAATTGCGATTGGATTACTCTCTCGCCAATTTTTCCG
TGAAAAACGTGAAAGCCTCGCTAATGCGGGACAAAAAGGACGTATTGTGATGGGATGGAGTTTGTTAGTGGTAGGCTTAC
TGGTCTTAACAGGCTTTGATAAACAAATTGAAATCTGGCTCGTTGAATTAAGTCCAGAATGGCTAACTAACTTAACAACC
CGCTTTTAA

Upstream 100 bases:

>100_bases
TCTGTTTAACCAAGGCAAAGAAGTACGCCGCAGTATTGCTGAAACAAGCGAAGACGGTTTGCGTCGTTTTATCACCCTCC
CATAAGGAAACTGACATAAT

Downstream 100 bases:

>100_bases
CTCTTAAAAAGTGCGCTACGTTTTTTCACATTATGATTAACGCAACGAAAAAAGGGCTGTTTATACAGCCCTTAAATCAC
GAATAAAACGATTATTCTAC

Product: DsbD

Products: DsbDoxidized; DsbGreduced [C]

Alternate protein names: Cytochrome C Biogenesis Protein; Cytochrome C-Type Biogenesis Protein; Cytochrome C Biogenesis Protein Transmembrane Protein; Membrane Assocaited Cytochrome C-Type Biogenesis Protein; ThiolDisulfide Interchange Protein

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MDISVTVLGLSLLAGLLTTLSPCVLPILPIVASSAMAKRKVGLFTLAFGMAISFTLVGTVIASIGLALGLNSEYLRYGAA
ILMLLVAFWLLSSRLQALLSRYTSLLTGKGEAWLSGFNPESATGQFFVGLLLGIVWAPCIGPTLGAAIALASQGEALASV
AIVMVIFSLGAVIPLIAIGLLSRQFFREKRESLANAGQKGRIVMGWSLLVVGLLVLTGFDKQIEIWLVELSPEWLTNLTT
RF

Sequences:

>Translated_242_residues
MDISVTVLGLSLLAGLLTTLSPCVLPILPIVASSAMAKRKVGLFTLAFGMAISFTLVGTVIASIGLALGLNSEYLRYGAA
ILMLLVAFWLLSSRLQALLSRYTSLLTGKGEAWLSGFNPESATGQFFVGLLLGIVWAPCIGPTLGAAIALASQGEALASV
AIVMVIFSLGAVIPLIAIGLLSRQFFREKRESLANAGQKGRIVMGWSLLVVGLLVLTGFDKQIEIWLVELSPEWLTNLTT
RF
>Mature_242_residues
MDISVTVLGLSLLAGLLTTLSPCVLPILPIVASSAMAKRKVGLFTLAFGMAISFTLVGTVIASIGLALGLNSEYLRYGAA
ILMLLVAFWLLSSRLQALLSRYTSLLTGKGEAWLSGFNPESATGQFFVGLLLGIVWAPCIGPTLGAAIALASQGEALASV
AIVMVIFSLGAVIPLIAIGLLSRQFFREKRESLANAGQKGRIVMGWSLLVVGLLVLTGFDKQIEIWLVELSPEWLTNLTT
RF

Specific function: Required To Facilitate The Formation Of Correct Disulfide Bonds In Some Periplasmic Proteins And For The Assembly Of The Periplasmic C-Type Cytochromes. Acts By Transferring Electrons From Cytoplasmic Thioredoxin To The Periplasm, Thereby Maintaining The

COG id: COG0785

COG function: function code O; Cytochrome c biogenesis protein

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.8.1.8 [C]

Molecular weight: Translated: 25654; Mature: 25654

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDISVTVLGLSLLAGLLTTLSPCVLPILPIVASSAMAKRKVGLFTLAFGMAISFTLVGTV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IASIGLALGLNSEYLRYGAAILMLLVAFWLLSSRLQALLSRYTSLLTGKGEAWLSGFNPE
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCC
SATGQFFVGLLLGIVWAPCIGPTLGAAIALASQGEALASVAIVMVIFSLGAVIPLIAIGL
CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LSRQFFREKRESLANAGQKGRIVMGWSLLVVGLLVLTGFDKQIEIWLVELSPEWLTNLTT
HHHHHHHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHCCCCEEEEEEEEECHHHHHHHHC
RF
CC
>Mature Secondary Structure
MDISVTVLGLSLLAGLLTTLSPCVLPILPIVASSAMAKRKVGLFTLAFGMAISFTLVGTV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IASIGLALGLNSEYLRYGAAILMLLVAFWLLSSRLQALLSRYTSLLTGKGEAWLSGFNPE
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCC
SATGQFFVGLLLGIVWAPCIGPTLGAAIALASQGEALASVAIVMVIFSLGAVIPLIAIGL
CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LSRQFFREKRESLANAGQKGRIVMGWSLLVVGLLVLTGFDKQIEIWLVELSPEWLTNLTT
HHHHHHHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHCCCCEEEEEEEEECHHHHHHHHC
RF
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DsbGoxidized; DsbDreduced/thiol:disulfide reductase [C]

Specific reaction: DsbDreduced/thiol:disulfide reductase + DsbCoxidized = DsbDoxidized + DsbCreduced DsbGoxidized + DsbDreduced/thiol:disulfide reductase = DsbGreduced + DsbDoxidized [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA