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The map label for this gene is yidJ [H]

Identifier: 15603547

GI number: 15603547

Start: 1889312

End: 1890673

Strand: Direct

Name: yidJ [H]

Synonym: PM1682

Alternate gene names: 15603547

Gene position: 1889312-1890673 (Clockwise)

Preceding gene: 15603546

Following gene: 15603548

Centisome position: 83.69

GC content: 42.8

Gene sequence:

>1362_bases
ATGACTAGACCTAATATTATTTTTTATTTCACTGACCAACAGCGTTGGGATACCGTGGGTGCTTATGGGCAACCACTTGA
TATTACACCAACATTAGATAAATTAGCCGAGGATGGTGTGGTGTTTGAAGAAGCCTACTCTTCACAACCGGTTTGTGGTC
CTTGTCGTTCAATTTTCCAAACGGGATTATACCCAACCGAAACGGGCTGTTTCCGTAATAATATTGCTCTTCCAGAAGGG
GTTAAAACCATCGCAGATTATTTTAATGAAAATGATTATGACACTGCCTATATTGGCAAATGGCATCTAGCCAGTGATGG
CGAACTCGAAGAAGAGCCAACGATTGATTACACCACCAGTGCGATTCCACCAGAACGTCGTGGCGGATATAAAGGCTTTT
GGCGAGCCTCAGATGTCTTAGAATTCACCTCTCACGGCTATGACGGTTATGTTTTTGACGAGAATATGAACAAGTGTGAA
TTCAAAGGCTATCGCGTTGATTGTATTACCGACTTTGCGCTGGAATATCTCGATCAATATCAAGGCGATAAACCGTTTTT
CATGACCATCTCACATATTGAACCTCATCACCAAAACGATCGTCATTGCTATGAAGGACCGGATGGCTCAAAAATCCGTT
TCAAAGATTTTGAGTTACCAAAAGATTTAGCAGAATTAAAAGGTAATGCGGCAGAAATGTATCCTGATTACCTTGGCTGC
TGCCGTAGCTTAGATGACAACTTAGCGCGTTTAATTGAGAAATTAAAAGAGAAAGGACTCTATGACAATACCATTATTGT
CTTCGCCTCTGATCATGGTTCGCACTTTATGACTCGCAACACTGATGAAAACCTCAATGGTTATGATGACTATAAACGCT
CTTGCCATTCTTCTGCGTTGCATGTCCCGCTGGTCATTGCTGGCGGTGCATTTAAAGGCGGAAAACGCGTCAAAGACTTA
GTCAGTACCGCAAGTTTGCCAAAAACCTTCCTTGCCATGGCGGGCATTGATGTGGGCGATGCGATGATTGGTGAAAACCT
ACAAGACGTGGTAGAAAATAACATTCCAAACCGAGTAAATGAAGTGTTCGCACAAATCAGCGAAAGCCGAGTAGGTCGCT
GTATCCGCACAGAAAAATACTTATATAGTGTTTTCGCACCGAATAAACATGGTGGTGTACACGCGGGCAGTGATGTATAT
CAAGAAGACTTCCTCTATGATTTAGAGAAAGACCCTTATGAGCTCAATAACCTCGTGCGTGATCCTGCCTACGAGCAAGT
ACGTGTTGAATTACGTGAAAAACTCTGTGAGCATATGCTAAAAGCAAAAGAAGAACGTCCAACGATTCTTCCTGCCGCGT
AA

Upstream 100 bases:

>100_bases
TTCTCACTGGCGTTCTGTATCTTAATCTTAGTAACCATCATGAGCATTGTGTTCAATAATTACAAAAAAGCGAAAAAGGG
CTATTAAACGAGGAAGCATT

Downstream 100 bases:

>100_bases
CACGATAATAAAAGAAGATCATGCTGATCCAAAAAGCCTGATCTTCTTGTCTTTTTGACGTTTCATCTCCTCGGATGTCT
ATCCATTTTGCGCTTATCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 453; Mature: 452

Protein sequence:

>453_residues
MTRPNIIFYFTDQQRWDTVGAYGQPLDITPTLDKLAEDGVVFEEAYSSQPVCGPCRSIFQTGLYPTETGCFRNNIALPEG
VKTIADYFNENDYDTAYIGKWHLASDGELEEEPTIDYTTSAIPPERRGGYKGFWRASDVLEFTSHGYDGYVFDENMNKCE
FKGYRVDCITDFALEYLDQYQGDKPFFMTISHIEPHHQNDRHCYEGPDGSKIRFKDFELPKDLAELKGNAAEMYPDYLGC
CRSLDDNLARLIEKLKEKGLYDNTIIVFASDHGSHFMTRNTDENLNGYDDYKRSCHSSALHVPLVIAGGAFKGGKRVKDL
VSTASLPKTFLAMAGIDVGDAMIGENLQDVVENNIPNRVNEVFAQISESRVGRCIRTEKYLYSVFAPNKHGGVHAGSDVY
QEDFLYDLEKDPYELNNLVRDPAYEQVRVELREKLCEHMLKAKEERPTILPAA

Sequences:

>Translated_453_residues
MTRPNIIFYFTDQQRWDTVGAYGQPLDITPTLDKLAEDGVVFEEAYSSQPVCGPCRSIFQTGLYPTETGCFRNNIALPEG
VKTIADYFNENDYDTAYIGKWHLASDGELEEEPTIDYTTSAIPPERRGGYKGFWRASDVLEFTSHGYDGYVFDENMNKCE
FKGYRVDCITDFALEYLDQYQGDKPFFMTISHIEPHHQNDRHCYEGPDGSKIRFKDFELPKDLAELKGNAAEMYPDYLGC
CRSLDDNLARLIEKLKEKGLYDNTIIVFASDHGSHFMTRNTDENLNGYDDYKRSCHSSALHVPLVIAGGAFKGGKRVKDL
VSTASLPKTFLAMAGIDVGDAMIGENLQDVVENNIPNRVNEVFAQISESRVGRCIRTEKYLYSVFAPNKHGGVHAGSDVY
QEDFLYDLEKDPYELNNLVRDPAYEQVRVELREKLCEHMLKAKEERPTILPAA
>Mature_452_residues
TRPNIIFYFTDQQRWDTVGAYGQPLDITPTLDKLAEDGVVFEEAYSSQPVCGPCRSIFQTGLYPTETGCFRNNIALPEGV
KTIADYFNENDYDTAYIGKWHLASDGELEEEPTIDYTTSAIPPERRGGYKGFWRASDVLEFTSHGYDGYVFDENMNKCEF
KGYRVDCITDFALEYLDQYQGDKPFFMTISHIEPHHQNDRHCYEGPDGSKIRFKDFELPKDLAELKGNAAEMYPDYLGCC
RSLDDNLARLIEKLKEKGLYDNTIIVFASDHGSHFMTRNTDENLNGYDDYKRSCHSSALHVPLVIAGGAFKGGKRVKDLV
STASLPKTFLAMAGIDVGDAMIGENLQDVVENNIPNRVNEVFAQISESRVGRCIRTEKYLYSVFAPNKHGGVHAGSDVYQ
EDFLYDLEKDPYELNNLVRDPAYEQVRVELREKLCEHMLKAKEERPTILPAA

Specific function: Unknown

COG id: COG3119

COG function: function code P; Arylsulfatase A and related enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sulfatase family [H]

Homologues:

Organism=Homo sapiens, GI109389362, Length=365, Percent_Identity=26.5753424657534, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI38569407, Length=305, Percent_Identity=24.9180327868852, Blast_Score=84, Evalue=3e-16,
Organism=Homo sapiens, GI38569405, Length=513, Percent_Identity=21.8323586744639, Blast_Score=84, Evalue=3e-16,
Organism=Homo sapiens, GI59797060, Length=436, Percent_Identity=24.0825688073394, Blast_Score=81, Evalue=2e-15,
Organism=Homo sapiens, GI146229331, Length=443, Percent_Identity=22.5733634311512, Blast_Score=79, Evalue=7e-15,
Organism=Homo sapiens, GI146229329, Length=443, Percent_Identity=22.5733634311512, Blast_Score=79, Evalue=7e-15,
Organism=Homo sapiens, GI6005990, Length=443, Percent_Identity=22.5733634311512, Blast_Score=79, Evalue=7e-15,
Organism=Homo sapiens, GI146229324, Length=443, Percent_Identity=22.5733634311512, Blast_Score=79, Evalue=7e-15,
Organism=Homo sapiens, GI4503899, Length=114, Percent_Identity=29.8245614035088, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI157266309, Length=118, Percent_Identity=34.7457627118644, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI53831991, Length=114, Percent_Identity=35.9649122807018, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI31742482, Length=111, Percent_Identity=34.2342342342342, Blast_Score=71, Evalue=2e-12,
Organism=Escherichia coli, GI1790112, Length=483, Percent_Identity=29.1925465838509, Blast_Score=149, Evalue=3e-37,
Organism=Escherichia coli, GI87081924, Length=328, Percent_Identity=29.2682926829268, Blast_Score=107, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI17568795, Length=380, Percent_Identity=25, Blast_Score=82, Evalue=8e-16,
Organism=Caenorhabditis elegans, GI17559078, Length=217, Percent_Identity=26.2672811059908, Blast_Score=75, Evalue=7e-14,
Organism=Drosophila melanogaster, GI281366397, Length=439, Percent_Identity=26.1958997722096, Blast_Score=111, Evalue=8e-25,
Organism=Drosophila melanogaster, GI281366395, Length=439, Percent_Identity=26.1958997722096, Blast_Score=111, Evalue=8e-25,
Organism=Drosophila melanogaster, GI24666163, Length=439, Percent_Identity=26.1958997722096, Blast_Score=111, Evalue=8e-25,
Organism=Drosophila melanogaster, GI24666175, Length=289, Percent_Identity=26.2975778546713, Blast_Score=102, Evalue=4e-22,
Organism=Drosophila melanogaster, GI281363223, Length=286, Percent_Identity=26.5734265734266, Blast_Score=98, Evalue=1e-20,
Organism=Drosophila melanogaster, GI24666109, Length=305, Percent_Identity=28.8524590163934, Blast_Score=91, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017849
- InterPro:   IPR017850
- InterPro:   IPR000917 [H]

Pfam domain/function: PF00884 Sulfatase [H]

EC number: 3.1.6.- [C]

Molecular weight: Translated: 51450; Mature: 51319

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRPNIIFYFTDQQRWDTVGAYGQPLDITPTLDKLAEDGVVFEEAYSSQPVCGPCRSIFQ
CCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHCCCEEHHHHCCCCCCHHHHHHHH
TGLYPTETGCFRNNIALPEGVKTIADYFNENDYDTAYIGKWHLASDGELEEEPTIDYTTS
CCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCCCCEECC
AIPPERRGGYKGFWRASDVLEFTSHGYDGYVFDENMNKCEFKGYRVDCITDFALEYLDQY
CCCCHHCCCCCCCHHHHHHHHHHHCCCCCEEECCCCCCEECCCEEEHHHHHHHHHHHHHH
QGDKPFFMTISHIEPHHQNDRHCYEGPDGSKIRFKDFELPKDLAELKGNAAEMYPDYLGC
CCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHCCCHHHHCHHHHHH
CRSLDDNLARLIEKLKEKGLYDNTIIVFASDHGSHFMTRNTDENLNGYDDYKRSCHSSAL
HHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEECCCCCCCCCHHHHHHHHHCCCC
HVPLVIAGGAFKGGKRVKDLVSTASLPKTFLAMAGIDVGDAMIGENLQDVVENNIPNRVN
EEEEEEECCCCCCCHHHHHHHHHHCCHHHHHHHHCCCCCHHHHCCCHHHHHHCCCCHHHH
EVFAQISESRVGRCIRTEKYLYSVFAPNKHGGVHAGSDVYQEDFLYDLEKDPYELNNLVR
HHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHC
DPAYEQVRVELREKLCEHMLKAKEERPTILPAA
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
TRPNIIFYFTDQQRWDTVGAYGQPLDITPTLDKLAEDGVVFEEAYSSQPVCGPCRSIFQ
CCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHCCCEEHHHHCCCCCCHHHHHHHH
TGLYPTETGCFRNNIALPEGVKTIADYFNENDYDTAYIGKWHLASDGELEEEPTIDYTTS
CCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCCCCEECC
AIPPERRGGYKGFWRASDVLEFTSHGYDGYVFDENMNKCEFKGYRVDCITDFALEYLDQY
CCCCHHCCCCCCCHHHHHHHHHHHCCCCCEEECCCCCCEECCCEEEHHHHHHHHHHHHHH
QGDKPFFMTISHIEPHHQNDRHCYEGPDGSKIRFKDFELPKDLAELKGNAAEMYPDYLGC
CCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHCCCHHHHCHHHHHH
CRSLDDNLARLIEKLKEKGLYDNTIIVFASDHGSHFMTRNTDENLNGYDDYKRSCHSSAL
HHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEECCCCCCCCCHHHHHHHHHCCCC
HVPLVIAGGAFKGGKRVKDLVSTASLPKTFLAMAGIDVGDAMIGENLQDVVENNIPNRVN
EEEEEEECCCCCCCHHHHHHHHHHCCHHHHHHHHCCCCCHHHHCCCHHHHHHCCCCHHHH
EVFAQISESRVGRCIRTEKYLYSVFAPNKHGGVHAGSDVYQEDFLYDLEKDPYELNNLVR
HHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHC
DPAYEQVRVELREKLCEHMLKAKEERPTILPAA
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds; Sulfuric ester hydrolases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]