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The map label for this gene is rpiA_1 [H]

Identifier: 15603510

GI number: 15603510

Start: 1854276

End: 1854731

Strand: Reverse

Name: rpiA_1 [H]

Synonym: PM1645

Alternate gene names: 15603510

Gene position: 1854731-1854276 (Counterclockwise)

Preceding gene: 15603511

Following gene: 15603509

Centisome position: 82.16

GC content: 40.79

Gene sequence:

>456_bases
ATGAAAATCGCCATTGGCTGTGATGATGCGGCTTATAATTTGAAGGTGGAATTAATTAAGTTTTTAACTTCCCTTGGCAT
TGAATGTGATGATTTTGGTGCGGGTGCTGGTGATACAACACTGTATCCGAATGTTGCTGAGAAAGTCGCAATCGCTGTCG
CAAAAGGAGAATATGACAGAGGCATTTTAACCTGTGGAACAGGAATTGGTATGTGCATTACTGCGAATAAGATTCCTGGG
ATTCGTGCTGCTGTGTGTCATGATGTTTTTTCTGCAGAGCGAGCAAGAAAGAGTAATGATGCGCAGATTATTTGTTTTGG
TGAAAGGGTTATCGGTGTCGAATTGGCCAAAGCATTATTAAAAACGTGGTTAGCGTGTGACTTCGCAGGTGGTGGTTCTA
CACCTAAAGTTGCGCAAATTAATGAAATTGATTCTAAATATCATCGCTCTTTATAG

Upstream 100 bases:

>100_bases
TTTAAGAACAGGAATTATTAATATTATTGCTACAACCGCCAGCAACATTAACACAATTTTGAGTTTAACGAAAAGTTAAG
ATACTGATAAGGAGCTAAAA

Downstream 100 bases:

>100_bases
CGATATTAGAATTGAATGTGTTCTTATTTTAACAATAGGGTGTGACTTATGAAAAAACTTAATCTTATTTCTTCTGCGAT
AGTATTAACAATGTTTTCTA

Product: hypothetical protein

Products: NA

Alternate protein names: Phosphoriboisomerase B [H]

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MKIAIGCDDAAYNLKVELIKFLTSLGIECDDFGAGAGDTTLYPNVAEKVAIAVAKGEYDRGILTCGTGIGMCITANKIPG
IRAAVCHDVFSAERARKSNDAQIICFGERVIGVELAKALLKTWLACDFAGGGSTPKVAQINEIDSKYHRSL

Sequences:

>Translated_151_residues
MKIAIGCDDAAYNLKVELIKFLTSLGIECDDFGAGAGDTTLYPNVAEKVAIAVAKGEYDRGILTCGTGIGMCITANKIPG
IRAAVCHDVFSAERARKSNDAQIICFGERVIGVELAKALLKTWLACDFAGGGSTPKVAQINEIDSKYHRSL
>Mature_151_residues
MKIAIGCDDAAYNLKVELIKFLTSLGIECDDFGAGAGDTTLYPNVAEKVAIAVAKGEYDRGILTCGTGIGMCITANKIPG
IRAAVCHDVFSAERARKSNDAQIICFGERVIGVELAKALLKTWLACDFAGGGSTPKVAQINEIDSKYHRSL

Specific function: In addition to its activity on D-ribose 5-phosphate it probably also has activity on D-allose 6-phosphate [H]

COG id: COG0698

COG function: function code G; Ribose 5-phosphate isomerase RpiB

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lacAB/rpiB family [H]

Homologues:

Organism=Escherichia coli, GI1790528, Length=145, Percent_Identity=44.8275862068966, Blast_Score=137, Evalue=4e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003500
- InterPro:   IPR004785 [H]

Pfam domain/function: PF02502 LacAB_rpiB [H]

EC number: =5.3.1.6 [H]

Molecular weight: Translated: 16001; Mature: 16001

Theoretical pI: Translated: 6.48; Mature: 6.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
4.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIAIGCDDAAYNLKVELIKFLTSLGIECDDFGAGAGDTTLYPNVAEKVAIAVAKGEYDR
CEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHEEEEEECCCCCC
GILTCGTGIGMCITANKIPGIRAAVCHDVFSAERARKSNDAQIICFGERVIGVELAKALL
CEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCEEHHHHHHHHHH
KTWLACDFAGGGSTPKVAQINEIDSKYHRSL
HHHHHEECCCCCCCCCEEHHHHHHHHHHHCC
>Mature Secondary Structure
MKIAIGCDDAAYNLKVELIKFLTSLGIECDDFGAGAGDTTLYPNVAEKVAIAVAKGEYDR
CEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHEEEEEECCCCCC
GILTCGTGIGMCITANKIPGIRAAVCHDVFSAERARKSNDAQIICFGERVIGVELAKALL
CEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCEEHHHHHHHHHH
KTWLACDFAGGGSTPKVAQINEIDSKYHRSL
HHHHHEECCCCCCCCCEEHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8576032; 7610040; 9278503; 1840580; 7984428; 9401019 [H]