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The map label for this gene is yiaO [C]

Identifier: 15603509

GI number: 15603509

Start: 1853250

End: 1854227

Strand: Reverse

Name: yiaO [C]

Synonym: PM1644

Alternate gene names: 15603509

Gene position: 1854227-1853250 (Counterclockwise)

Preceding gene: 15603510

Following gene: 15603508

Centisome position: 82.14

GC content: 35.38

Gene sequence:

>978_bases
ATGAAAAAACTTAATCTTATTTCTTCTGCGATAGTATTAACAATGTTTTCTAGTGCGTCTATTGCGGCCAGCAACTACAC
ATTTGCTTTGAGTCATTATGGTTCACCAAGTGATACAGTGACAAAAGCGACAGAGTTAATGGCAAAAAGAGCGCATGAAT
TATCTAATGGTCGCATTACCATAAAATTACATCCGAATAGTGAATTAGGTAATTCAGGTGCACAAATTGATGGTGTGCGT
ATGGGGACAATTGATATTGTGGTTGTGGGAAATCCATATTATACCACTTTCAATGAAGAGCTAAATTTACTTGATTTACC
TTTCTTATTCCGTGATGAAACACATGTTGAAAAAGTTTTAGCAGGCGATGTTGGTGAGCATTTGTTAGCTTCTTTTGAAA
AAGTGGGGCTTAAAGGTCTAGCGTTTTATGAAGTCGGCTTTAGAGATATTACCAATAATAAACGCCCTATCAGCACAGTC
AAAGATTTATCCCATTTGAAATTAAGAACAACACCAAATCCAGCACATATTTCTGCATTTAAAGAATGGGGCGTGAATCC
AACACCAATGCCATTTAATGAAGTCTATTTTTCTTTAAAAACAGGGGTCATCGATGGTCAAGAGAACCCAGTTCATCATA
TTTATAACAATAACTTACAAGAAGTTCAAAAATATCTTTCTCTGACTCACCATGCCTATACAGCCGCGCCAATGACCATG
AATTTAGATACCTTTAATTCTTTGGATAAAGAAACGCAGCGTATTTTATTACAAGTGGCTAAAGAGGGGGCAGAGTTAGA
AAAACAACTCAACATTGAAGAGAATAAAATTTATCTTGGTAAATTAAAAGAACAAGGAATGGAAATTGAGTATTCCCCAG
ATACGGCGTCATTCCAAGAAGGTGCTAAAAAAGCATGGCATGATTATGCGAAAAAATTTGGTGACAAATTAATTAATAAA
GTGGTTGAAACTCAATAA

Upstream 100 bases:

>100_bases
TAAAGTTGCGCAAATTAATGAAATTGATTCTAAATATCATCGCTCTTTATAGCGATATTAGAATTGAATGTGTTCTTATT
TTAACAATAGGGTGTGACTT

Downstream 100 bases:

>100_bases
TAGGTAAAAGGCTACTAGTAAATAGTAGCCATTTTTACATTCAAGAGGGAATTATGATTGAACGTTATAATAAATTTATT
AGTAATACTTTCCTTTCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MKKLNLISSAIVLTMFSSASIAASNYTFALSHYGSPSDTVTKATELMAKRAHELSNGRITIKLHPNSELGNSGAQIDGVR
MGTIDIVVVGNPYYTTFNEELNLLDLPFLFRDETHVEKVLAGDVGEHLLASFEKVGLKGLAFYEVGFRDITNNKRPISTV
KDLSHLKLRTTPNPAHISAFKEWGVNPTPMPFNEVYFSLKTGVIDGQENPVHHIYNNNLQEVQKYLSLTHHAYTAAPMTM
NLDTFNSLDKETQRILLQVAKEGAELEKQLNIEENKIYLGKLKEQGMEIEYSPDTASFQEGAKKAWHDYAKKFGDKLINK
VVETQ

Sequences:

>Translated_325_residues
MKKLNLISSAIVLTMFSSASIAASNYTFALSHYGSPSDTVTKATELMAKRAHELSNGRITIKLHPNSELGNSGAQIDGVR
MGTIDIVVVGNPYYTTFNEELNLLDLPFLFRDETHVEKVLAGDVGEHLLASFEKVGLKGLAFYEVGFRDITNNKRPISTV
KDLSHLKLRTTPNPAHISAFKEWGVNPTPMPFNEVYFSLKTGVIDGQENPVHHIYNNNLQEVQKYLSLTHHAYTAAPMTM
NLDTFNSLDKETQRILLQVAKEGAELEKQLNIEENKIYLGKLKEQGMEIEYSPDTASFQEGAKKAWHDYAKKFGDKLINK
VVETQ
>Mature_325_residues
MKKLNLISSAIVLTMFSSASIAASNYTFALSHYGSPSDTVTKATELMAKRAHELSNGRITIKLHPNSELGNSGAQIDGVR
MGTIDIVVVGNPYYTTFNEELNLLDLPFLFRDETHVEKVLAGDVGEHLLASFEKVGLKGLAFYEVGFRDITNNKRPISTV
KDLSHLKLRTTPNPAHISAFKEWGVNPTPMPFNEVYFSLKTGVIDGQENPVHHIYNNNLQEVQKYLSLTHHAYTAAPMTM
NLDTFNSLDKETQRILLQVAKEGAELEKQLNIEENKIYLGKLKEQGMEIEYSPDTASFQEGAKKAWHDYAKKFGDKLINK
VVETQ

Specific function: Unknown

COG id: COG1638

COG function: function code G; TRAP-type C4-dicarboxylate transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 7 family [H]

Homologues:

Organism=Escherichia coli, GI1790004, Length=289, Percent_Identity=40.8304498269896, Blast_Score=226, Evalue=2e-60,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018389
- InterPro:   IPR004682 [H]

Pfam domain/function: PF03480 SBP_bac_7 [H]

EC number: NA

Molecular weight: Translated: 36377; Mature: 36377

Theoretical pI: Translated: 6.66; Mature: 6.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLNLISSAIVLTMFSSASIAASNYTFALSHYGSPSDTVTKATELMAKRAHELSNGRIT
CCCHHHHHHHHHHHHHCCCCEEECCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEE
IKLHPNSELGNSGAQIDGVRMGTIDIVVVGNPYYTTFNEELNLLDLPFLFRDETHVEKVL
EEECCCCCCCCCCCEECCEEECEEEEEEECCCEEEEECCCCCEEECCHHCCCHHHHHHHH
AGDVGEHLLASFEKVGLKGLAFYEVGFRDITNNKRPISTVKDLSHLKLRTTPNPAHISAF
HHHHHHHHHHHHHHCCCCEEEEEECCCHHHCCCCCCHHHHHHHHHEEEECCCCHHHHHHH
KEWGVNPTPMPFNEVYFSLKTGVIDGQENPVHHIYNNNLQEVQKYLSLTHHAYTAAPMTM
HHCCCCCCCCCHHHHHEEHCCCEECCCCCCCHHHHCCCHHHHHHHHHHHHHHHCCCCEEE
NLDTFNSLDKETQRILLQVAKEGAELEKQLNIEENKIYLGKLKEQGMEIEYSPDTASFQE
ECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHCCCEEEECCCCCHHHH
GAKKAWHDYAKKFGDKLINKVVETQ
HHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKLNLISSAIVLTMFSSASIAASNYTFALSHYGSPSDTVTKATELMAKRAHELSNGRIT
CCCHHHHHHHHHHHHHCCCCEEECCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEE
IKLHPNSELGNSGAQIDGVRMGTIDIVVVGNPYYTTFNEELNLLDLPFLFRDETHVEKVL
EEECCCCCCCCCCCEECCEEECEEEEEEECCCEEEEECCCCCEEECCHHCCCHHHHHHHH
AGDVGEHLLASFEKVGLKGLAFYEVGFRDITNNKRPISTVKDLSHLKLRTTPNPAHISAF
HHHHHHHHHHHHHHCCCCEEEEEECCCHHHCCCCCCHHHHHHHHHEEEECCCCHHHHHHH
KEWGVNPTPMPFNEVYFSLKTGVIDGQENPVHHIYNNNLQEVQKYLSLTHHAYTAAPMTM
HHCCCCCCCCCHHHHHEEHCCCEECCCCCCCHHHHCCCHHHHHHHHHHHHHHHCCCCEEE
NLDTFNSLDKETQRILLQVAKEGAELEKQLNIEENKIYLGKLKEQGMEIEYSPDTASFQE
ECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHCCCEEEECCCCCHHHH
GAKKAWHDYAKKFGDKLINKVVETQ
HHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]