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The map label for this gene is ygeA [H]

Identifier: 15603491

GI number: 15603491

Start: 1837457

End: 1838149

Strand: Reverse

Name: ygeA [H]

Synonym: PM1626

Alternate gene names: 15603491

Gene position: 1838149-1837457 (Counterclockwise)

Preceding gene: 15603492

Following gene: 15603490

Centisome position: 81.42

GC content: 38.53

Gene sequence:

>693_bases
ATGAAAACTCTCGGTATTATCGGCGGTATGTCGCCTGAAAGCACAGTGACTTATTACCGCTTAATCAACCAGTTAATTAA
CCAAGCCAAAAGTGGAAATCACAGCGCACCATTAGTGATGGTTAATGTGGAATTTGAACAAATTGTATGTTTACAGAAAC
AAGGTGAATGGCATAAGGCGGGGGAAATACTAGCCACTGCGGCAAAAAAATTGACGCAAATAGGTGCCGAAGGGATTTTA
TTAGCCACCAATACTATGCACAAAGTTGCACCACAAATTATTGACGTAATTGATGTGCCTTTTCTCCATATTATTGATGC
CACAGCAAAAGCCATTAAAATAAAAAATTTGACGCAAGTCGCGTTATTAGGCACGCAATTTACAATGCAAGATCCGTTCT
ATCGTGATCTTTTACTGCATCATGGTATTACGCCTCTTGTGCCAAACCAGAAACAGCAACAAGAAATTCATCGTATTATT
TTTACAGAACTTTGTGTCGGACAAATCAAACCTGAATCGAAACAATTTTATCTTGATGTCATTAATGACTTAGCCAAACA
AGGTGCCCAAGGTGTGATTTTAGGTTGTACCGAAATTGGCTTATTGATTAATCAACAAGACGCAACACTGCCATTTTTCG
ATACAACAACATTACATGCACAGGCTGCAGCTGAATTTATTCTGACGGAATAA

Upstream 100 bases:

>100_bases
AAGTGACCGCGCTTTCGCTTTACTGACGAATCAATTAAGTAAAGTGTACGATGTGTTAGCTATTCATCAAGTACGTGCAT
AAAAATATAAGAGGACGAGC

Downstream 100 bases:

>100_bases
TTTCTGATCAACCGAGCAAAGAGGACACACCGTTGCGCCTGTAGAGAAAATGATACACATTTTCTATTAATACTTAGTCA
ATATTGGTGGAATATTGATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MKTLGIIGGMSPESTVTYYRLINQLINQAKSGNHSAPLVMVNVEFEQIVCLQKQGEWHKAGEILATAAKKLTQIGAEGIL
LATNTMHKVAPQIIDVIDVPFLHIIDATAKAIKIKNLTQVALLGTQFTMQDPFYRDLLLHHGITPLVPNQKQQQEIHRII
FTELCVGQIKPESKQFYLDVINDLAKQGAQGVILGCTEIGLLINQQDATLPFFDTTTLHAQAAAEFILTE

Sequences:

>Translated_230_residues
MKTLGIIGGMSPESTVTYYRLINQLINQAKSGNHSAPLVMVNVEFEQIVCLQKQGEWHKAGEILATAAKKLTQIGAEGIL
LATNTMHKVAPQIIDVIDVPFLHIIDATAKAIKIKNLTQVALLGTQFTMQDPFYRDLLLHHGITPLVPNQKQQQEIHRII
FTELCVGQIKPESKQFYLDVINDLAKQGAQGVILGCTEIGLLINQQDATLPFFDTTTLHAQAAAEFILTE
>Mature_230_residues
MKTLGIIGGMSPESTVTYYRLINQLINQAKSGNHSAPLVMVNVEFEQIVCLQKQGEWHKAGEILATAAKKLTQIGAEGIL
LATNTMHKVAPQIIDVIDVPFLHIIDATAKAIKIKNLTQVALLGTQFTMQDPFYRDLLLHHGITPLVPNQKQQQEIHRII
FTELCVGQIKPESKQFYLDVINDLAKQGAQGVILGCTEIGLLINQQDATLPFFDTTTLHAQAAAEFILTE

Specific function: Unknown

COG id: COG1794

COG function: function code M; Aspartate racemase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aspartate/glutamate racemases family [H]

Homologues:

Organism=Escherichia coli, GI1789205, Length=230, Percent_Identity=51.304347826087, Blast_Score=236, Evalue=9e-64,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015942
- InterPro:   IPR001920
- InterPro:   IPR018187
- InterPro:   IPR004380 [H]

Pfam domain/function: PF01177 Asp_Glu_race [H]

EC number: NA

Molecular weight: Translated: 25378; Mature: 25378

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS00924 ASP_GLU_RACEMASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTLGIIGGMSPESTVTYYRLINQLINQAKSGNHSAPLVMVNVEFEQIVCLQKQGEWHKA
CCCEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECHHHHHEECCCCCHHHH
GEILATAAKKLTQIGAEGILLATNTMHKVAPQIIDVIDVPFLHIIDATAKAIKIKNLTQV
HHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHEECCCHHEE
ALLGTQFTMQDPFYRDLLLHHGITPLVPNQKQQQEIHRIIFTELCVGQIKPESKQFYLDV
EHCCCEECCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
INDLAKQGAQGVILGCTEIGLLINQQDATLPFFDTTTLHAQAAAEFILTE
HHHHHHCCCCEEEEEEEHCCEEEECCCCCCCEECCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKTLGIIGGMSPESTVTYYRLINQLINQAKSGNHSAPLVMVNVEFEQIVCLQKQGEWHKA
CCCEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECHHHHHEECCCCCHHHH
GEILATAAKKLTQIGAEGILLATNTMHKVAPQIIDVIDVPFLHIIDATAKAIKIKNLTQV
HHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHEECCCHHEE
ALLGTQFTMQDPFYRDLLLHHGITPLVPNQKQQQEIHRIIFTELCVGQIKPESKQFYLDV
EHCCCEECCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
INDLAKQGAQGVILGCTEIGLLINQQDATLPFFDTTTLHAQAAAEFILTE
HHHHHHCCCCEEEEEEEHCCEEEECCCCCCCEECCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 6350602; 2836407; 9278503 [H]