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The map label for this gene is ymdC [H]

Identifier: 15603451

GI number: 15603451

Start: 1796968

End: 1798512

Strand: Reverse

Name: ymdC [H]

Synonym: PM1586

Alternate gene names: 15603451

Gene position: 1798512-1796968 (Counterclockwise)

Preceding gene: 15603452

Following gene: 15603450

Centisome position: 79.67

GC content: 41.81

Gene sequence:

>1545_bases
ATGCTGATCGTGATTATCAAAAAACTGTTTCTTTTACTCGCCCTGATTCTGTTTAGCCTCGTGATACTTGCCCTAATAAG
CTACCAACGATTACCCACATCCGATCGTCCAATCAGTACGCATCCTCCCCTTAATCCCAACGGGCTGTTAGCACGCCATA
TCTTGCCGCAAGTTGCCCAACATCCCAACTTAACGGGATTGTATCCTTTAGGCGATGGGAAAGATGCCTTTCTCGCTCGC
TTGGCGCTCAGCGAACATGCCGAACATACACTCGACTTACAGTATTATATTTGGCATAACGATGTGTCTGGTCACTTACT
CTTACAAAGTCTATATAAAGCCGCAGTCCGCGGAGTAAAAGTCCGTTTATTATTGGACGACAATAATACCAAAGGCATGG
ACACGATCTTGGCTTCACTCAATGCACACCCTAATATCCAAATCCGCTTATTCAATCCCTTTATGCAACGTCAATATCGT
TGGTTAGGCTTTTTGAGCGACTTTTTTAGACTCAATCGTCGTATGCACAATAAGTCCTTCACCGCAGATGGCGTCATGAG
TATTCTTGGCGGGCGTAATATTGGTGATGAATATTTTGATGTGGGTAATGGTGTATTATTTGCTGATCTTGATGTTGCCG
CAACCGGCGCCGTCGTTACACACATTCAGACTGATTTTGATCGCTATTGGAATAGCCCATCAAGTTATCCTTTAGAAAGC
ATTATCATACGCGATCCTATTACGCCTTTTAATCCGTTGCCTGCATTAGATGATGAAACCCAAACTTATTTAAAACAACT
CACTGAACTGCCCTTTGCTAAAAGCTTAAAAGCAGGCACCTTAGCTTTTACATGGGCAGAGGCAGAATTAATCAGCGATG
ATCCTAAAAAGGCACTAGGCAAATCATTGATTCAAGACAGTGTCTTAGCACATATTGCTCCCACAATGTTAAATGCGAAA
AACAACTTAATCATTGTGTCGCCTTATTTTGTACCAACCCATGTTGGTGTGGATTTCTTAAGTCGTATCAGCCAGACTGG
CACACAGGTTTCCATTCTAACCAATTCACTGGAAGCAACCGATGTTAGCATTGTACATTCTGGTTATGCTAAACACCGCA
AAACATTGTTACAAAAGCAAATCCAACTGTATGAGCTGAAACCTCATGCAACCATTCAAATGGAATCCTCAGGGCATTTA
TTAAAAGGAGCCAGTAGCGCCAGTTTACATGCCAAAACATTTACTCTTGATAATCGCTATTTATTTGTTGGTTCCTTTAA
TATGGATCCGCGCTCTGCTATGTTGAATACGGAAATGGGATTACTCATTGACAGCCCTGAATTGGCTCGCTTACTCAGTG
ATGGACTGCAACAAAATCAAGCAAATTATGCTTTTTCGGTTAAGTTAAATGAGGCGCAAGCACTGTATTGGGAAACGCAA
GAAAATGGGAAATGGATTCGCTATGAAAATGAGCCACACACCAGTTGGTTTAAGCGTTTTAGTGTGTGGTGTTTATCTTG
GTTACCTGTTGAACATTTGCTATAA

Upstream 100 bases:

>100_bases
ACCAGACAAGTTACAATGGCAAAAGCTTGAAATGATATTCATACCCGCGCGGAGTAATCGCATGTAAACATTGCTCTCGC
ACTCTCAAAAGGTAACTGAC

Downstream 100 bases:

>100_bases
CCTCATCTTTTCCAATGGACATCACATCGGCAAAAAAGATAACCATCATTTTTGGAAAAAATGATGAAAAAATACTCCAA
TTTTGGTTTAAAATACGTAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 514; Mature: 514

Protein sequence:

>514_residues
MLIVIIKKLFLLLALILFSLVILALISYQRLPTSDRPISTHPPLNPNGLLARHILPQVAQHPNLTGLYPLGDGKDAFLAR
LALSEHAEHTLDLQYYIWHNDVSGHLLLQSLYKAAVRGVKVRLLLDDNNTKGMDTILASLNAHPNIQIRLFNPFMQRQYR
WLGFLSDFFRLNRRMHNKSFTADGVMSILGGRNIGDEYFDVGNGVLFADLDVAATGAVVTHIQTDFDRYWNSPSSYPLES
IIIRDPITPFNPLPALDDETQTYLKQLTELPFAKSLKAGTLAFTWAEAELISDDPKKALGKSLIQDSVLAHIAPTMLNAK
NNLIIVSPYFVPTHVGVDFLSRISQTGTQVSILTNSLEATDVSIVHSGYAKHRKTLLQKQIQLYELKPHATIQMESSGHL
LKGASSASLHAKTFTLDNRYLFVGSFNMDPRSAMLNTEMGLLIDSPELARLLSDGLQQNQANYAFSVKLNEAQALYWETQ
ENGKWIRYENEPHTSWFKRFSVWCLSWLPVEHLL

Sequences:

>Translated_514_residues
MLIVIIKKLFLLLALILFSLVILALISYQRLPTSDRPISTHPPLNPNGLLARHILPQVAQHPNLTGLYPLGDGKDAFLAR
LALSEHAEHTLDLQYYIWHNDVSGHLLLQSLYKAAVRGVKVRLLLDDNNTKGMDTILASLNAHPNIQIRLFNPFMQRQYR
WLGFLSDFFRLNRRMHNKSFTADGVMSILGGRNIGDEYFDVGNGVLFADLDVAATGAVVTHIQTDFDRYWNSPSSYPLES
IIIRDPITPFNPLPALDDETQTYLKQLTELPFAKSLKAGTLAFTWAEAELISDDPKKALGKSLIQDSVLAHIAPTMLNAK
NNLIIVSPYFVPTHVGVDFLSRISQTGTQVSILTNSLEATDVSIVHSGYAKHRKTLLQKQIQLYELKPHATIQMESSGHL
LKGASSASLHAKTFTLDNRYLFVGSFNMDPRSAMLNTEMGLLIDSPELARLLSDGLQQNQANYAFSVKLNEAQALYWETQ
ENGKWIRYENEPHTSWFKRFSVWCLSWLPVEHLL
>Mature_514_residues
MLIVIIKKLFLLLALILFSLVILALISYQRLPTSDRPISTHPPLNPNGLLARHILPQVAQHPNLTGLYPLGDGKDAFLAR
LALSEHAEHTLDLQYYIWHNDVSGHLLLQSLYKAAVRGVKVRLLLDDNNTKGMDTILASLNAHPNIQIRLFNPFMQRQYR
WLGFLSDFFRLNRRMHNKSFTADGVMSILGGRNIGDEYFDVGNGVLFADLDVAATGAVVTHIQTDFDRYWNSPSSYPLES
IIIRDPITPFNPLPALDDETQTYLKQLTELPFAKSLKAGTLAFTWAEAELISDDPKKALGKSLIQDSVLAHIAPTMLNAK
NNLIIVSPYFVPTHVGVDFLSRISQTGTQVSILTNSLEATDVSIVHSGYAKHRKTLLQKQIQLYELKPHATIQMESSGHL
LKGASSASLHAKTFTLDNRYLFVGSFNMDPRSAMLNTEMGLLIDSPELARLLSDGLQQNQANYAFSVKLNEAQALYWETQ
ENGKWIRYENEPHTSWFKRFSVWCLSWLPVEHLL

Specific function: Unknown

COG id: COG1502

COG function: function code I; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PLD phosphodiesterase domains [H]

Homologues:

Organism=Escherichia coli, GI87081826, Length=472, Percent_Identity=48.3050847457627, Blast_Score=413, Evalue=1e-116,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001736 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57883; Mature: 57883

Theoretical pI: Translated: 7.39; Mature: 7.39

Prosite motif: PS50035 PLD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIVIIKKLFLLLALILFSLVILALISYQRLPTSDRPISTHPPLNPNGLLARHILPQVAQ
CEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHC
HPNLTGLYPLGDGKDAFLARLALSEHAEHTLDLQYYIWHNDVSGHLLLQSLYKAAVRGVK
CCCCCEEEECCCCHHHHHHHHHHHHCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHCCEE
VRLLLDDNNTKGMDTILASLNAHPNIQIRLFNPFMQRQYRWLGFLSDFFRLNRRMHNKSF
EEEEEECCCCCCHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCC
TADGVMSILGGRNIGDEYFDVGNGVLFADLDVAATGAVVTHIQTDFDRYWNSPSSYPLES
CHHHHHHHHCCCCCCHHHHHCCCCEEEEECCHHHCCCEEEHHHHHHHHHCCCCCCCCHHE
IIIRDPITPFNPLPALDDETQTYLKQLTELPFAKSLKAGTLAFTWAEAELISDDPKKALG
EEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCHHCCCCCEEEEEEEHHHHHCCCHHHHHH
KSLIQDSVLAHIAPTMLNAKNNLIIVSPYFVPTHVGVDFLSRISQTGTQVSILTNSLEAT
HHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCC
DVSIVHSGYAKHRKTLLQKQIQLYELKPHATIQMESSGHLLKGASSASLHAKTFTLDNRY
EEEHHHCCHHHHHHHHHHHHHHHEEECCCEEEEECCCCCEEECCCCCCEEEEEEEECCEE
LFVGSFNMDPRSAMLNTEMGLLIDSPELARLLSDGLQQNQANYAFSVKLNEAQALYWETQ
EEEEECCCCHHHHHHCCCCCEEECCHHHHHHHHHHHHCCCCCEEEEEEECCCEEEEEEEC
ENGKWIRYENEPHTSWFKRFSVWCLSWLPVEHLL
CCCCEEEECCCCCHHHHHHHHHHHHHHCCHHHCC
>Mature Secondary Structure
MLIVIIKKLFLLLALILFSLVILALISYQRLPTSDRPISTHPPLNPNGLLARHILPQVAQ
CEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHC
HPNLTGLYPLGDGKDAFLARLALSEHAEHTLDLQYYIWHNDVSGHLLLQSLYKAAVRGVK
CCCCCEEEECCCCHHHHHHHHHHHHCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHCCEE
VRLLLDDNNTKGMDTILASLNAHPNIQIRLFNPFMQRQYRWLGFLSDFFRLNRRMHNKSF
EEEEEECCCCCCHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCC
TADGVMSILGGRNIGDEYFDVGNGVLFADLDVAATGAVVTHIQTDFDRYWNSPSSYPLES
CHHHHHHHHCCCCCCHHHHHCCCCEEEEECCHHHCCCEEEHHHHHHHHHCCCCCCCCHHE
IIIRDPITPFNPLPALDDETQTYLKQLTELPFAKSLKAGTLAFTWAEAELISDDPKKALG
EEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCHHCCCCCEEEEEEEHHHHHCCCHHHHHH
KSLIQDSVLAHIAPTMLNAKNNLIIVSPYFVPTHVGVDFLSRISQTGTQVSILTNSLEAT
HHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCC
DVSIVHSGYAKHRKTLLQKQIQLYELKPHATIQMESSGHLLKGASSASLHAKTFTLDNRY
EEEHHHCCHHHHHHHHHHHHHHHEEECCCEEEEECCCCCEEECCCCCCEEEEEEEECCEE
LFVGSFNMDPRSAMLNTEMGLLIDSPELARLLSDGLQQNQANYAFSVKLNEAQALYWETQ
EEEEECCCCHHHHHHCCCCCEEECCHHHHHHHHHHHHCCCCCEEEEEEECCCEEEEEEEC
ENGKWIRYENEPHTSWFKRFSVWCLSWLPVEHLL
CCCCEEEECCCCCHHHHHHHHHHHHHHCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]