| Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
|---|---|
| Accession | NC_002663 |
| Length | 2,257,487 |
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The map label for this gene is murR [H]
Identifier: 15603442
GI number: 15603442
Start: 1786275
End: 1787135
Strand: Direct
Name: murR [H]
Synonym: PM1577
Alternate gene names: 15603442
Gene position: 1786275-1787135 (Clockwise)
Preceding gene: 15603439
Following gene: 15603443
Centisome position: 79.13
GC content: 40.42
Gene sequence:
>861_bases ATGGGATTTTTAATTAAGCTGAAACATACTTATCCTTCGCTTTCCCCGAATGAACAGCGAATTGCAGACTTTATTTTAAA ACACCCACACGAAGTAAAATCTTCTTCATCAAAAGCGTTAGCAAATCAAATTGCCGTGAGCCAATCTGCGATCATTAAGT TTAGCCAGAAGTTAGGCGCGGATAAATTTAGTGATTTCAAACTGGCGATTAGTGAGGCATTGATTCGTCAAGAGACACAG TCAGAACCGCGTGTCCATTTACACGACAGTATTACCGATAAAGACGATTTAAGTGAAATTGCAGAAAAACTGTTTGTAGA AAAACAACAGGCATTGAAAGAAAGTTTAAGTTTGAACGCGATTCCTTATGTTGCGCGTGTGGTTGAGCAGCTCATGCAGG CGAAACGTATTCAGTTGATGGGCATTGGGAATTCTGCGTTAGTAGCTAAAGATTTCTTTTATAAATTAACGAAAATTGGT TTGCCCGTTGTGACCGAAACGGATACTCATGCTTCTTTAGCAATGAGCCAGAGTTTAACGCCACAAGATATTCTTTTTTT GATTTCGTTTTCTGGACGCCACCGCGAAATTTTATTGGCGGCAGAGAATGCCAAAGCTCGCCAGATTAAAATAATCGCGT TGACGGCGTTAACGACTAATCCATTGCATGAATTAGCAGATTATTTACTCTATTCGGTTGCCGATGAGTCCACGTTTCGT AGTTCGTCCATTGCTTCACGAACAGCACAGCATGCAATAACAGACTTGTTATTTATGGGTATCTTGCAACAGAAAGAACA TGCCAATGACCTGATTTTAGAAAGCCGTGCCTTGATTGGTCAACTGAACAAAGGACGTTAG
Upstream 100 bases:
>100_bases TTTACTTTGGATTATTTTATTCCAAAATACCTCAATAATGGAGATTATTTATTCATTCTGTGAGCTTGCTCACTTTTTAT TCTTATACGGGAGCTGCCCT
Downstream 100 bases:
>100_bases GACAAGCCAAAAAGTGCGGTGTTTTTTTGGATTTTTTTGTTAAGTGCAAGAGGTATGTGTTCTTTAACAATTTCTTTACA AGAAAGCAGGAGCATGATAA
Product: hypothetical protein
Products: NA
Alternate protein names: MurPQ operon repressor [H]
Number of amino acids: Translated: 286; Mature: 285
Protein sequence:
>286_residues MGFLIKLKHTYPSLSPNEQRIADFILKHPHEVKSSSSKALANQIAVSQSAIIKFSQKLGADKFSDFKLAISEALIRQETQ SEPRVHLHDSITDKDDLSEIAEKLFVEKQQALKESLSLNAIPYVARVVEQLMQAKRIQLMGIGNSALVAKDFFYKLTKIG LPVVTETDTHASLAMSQSLTPQDILFLISFSGRHREILLAAENAKARQIKIIALTALTTNPLHELADYLLYSVADESTFR SSSIASRTAQHAITDLLFMGILQQKEHANDLILESRALIGQLNKGR
Sequences:
>Translated_286_residues MGFLIKLKHTYPSLSPNEQRIADFILKHPHEVKSSSSKALANQIAVSQSAIIKFSQKLGADKFSDFKLAISEALIRQETQ SEPRVHLHDSITDKDDLSEIAEKLFVEKQQALKESLSLNAIPYVARVVEQLMQAKRIQLMGIGNSALVAKDFFYKLTKIG LPVVTETDTHASLAMSQSLTPQDILFLISFSGRHREILLAAENAKARQIKIIALTALTTNPLHELADYLLYSVADESTFR SSSIASRTAQHAITDLLFMGILQQKEHANDLILESRALIGQLNKGR >Mature_285_residues GFLIKLKHTYPSLSPNEQRIADFILKHPHEVKSSSSKALANQIAVSQSAIIKFSQKLGADKFSDFKLAISEALIRQETQS EPRVHLHDSITDKDDLSEIAEKLFVEKQQALKESLSLNAIPYVARVVEQLMQAKRIQLMGIGNSALVAKDFFYKLTKIGL PVVTETDTHASLAMSQSLTPQDILFLISFSGRHREILLAAENAKARQIKIIALTALTTNPLHELADYLLYSVADESTFRS SSIASRTAQHAITDLLFMGILQQKEHANDLILESRALIGQLNKGR
Specific function: Represses the expression of the murPQ operon involved in the uptake and degradation of N-acetylmuramic acid (MurNAc). Binds to two adjacent inverted repeats within the operator region. MurNAc 6-phosphate, the substrate of murQ, is the specific inducer tha
COG id: COG1737
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 SIS domain [H]
Homologues:
Organism=Escherichia coli, GI1788767, Length=264, Percent_Identity=42.0454545454545, Blast_Score=214, Evalue=4e-57, Organism=Escherichia coli, GI87082130, Length=283, Percent_Identity=39.2226148409894, Blast_Score=191, Evalue=3e-50, Organism=Escherichia coli, GI87082369, Length=286, Percent_Identity=25.5244755244755, Blast_Score=94, Evalue=1e-20, Organism=Escherichia coli, GI1788159, Length=263, Percent_Identity=28.8973384030418, Blast_Score=92, Evalue=3e-20,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022821 - InterPro: IPR000281 - InterPro: IPR001347 - InterPro: IPR011991 [H]
Pfam domain/function: PF01418 HTH_6; PF01380 SIS [H]
EC number: NA
Molecular weight: Translated: 31802; Mature: 31671
Theoretical pI: Translated: 9.25; Mature: 9.25
Prosite motif: PS51071 HTH_RPIR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFLIKLKHTYPSLSPNEQRIADFILKHPHEVKSSSSKALANQIAVSQSAIIKFSQKLGA CCEEEEEECCCCCCCCCHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCC DKFSDFKLAISEALIRQETQSEPRVHLHDSITDKDDLSEIAEKLFVEKQQALKESLSLNA CCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC IPYVARVVEQLMQAKRIQLMGIGNSALVAKDFFYKLTKIGLPVVTETDTHASLAMSQSLT HHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHCCCC PQDILFLISFSGRHREILLAAENAKARQIKIIALTALTTNPLHELADYLLYSVADESTFR HHHEEEEEECCCCCEEEEEEECCCCCEEEEEEEEEEECCCHHHHHHHHHHHHHHCCHHHH SSSIASRTAQHAITDLLFMGILQQKEHANDLILESRALIGQLNKGR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure GFLIKLKHTYPSLSPNEQRIADFILKHPHEVKSSSSKALANQIAVSQSAIIKFSQKLGA CEEEEEECCCCCCCCCHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCC DKFSDFKLAISEALIRQETQSEPRVHLHDSITDKDDLSEIAEKLFVEKQQALKESLSLNA CCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC IPYVARVVEQLMQAKRIQLMGIGNSALVAKDFFYKLTKIGLPVVTETDTHASLAMSQSLT HHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHCCCC PQDILFLISFSGRHREILLAAENAKARQIKIIALTALTTNPLHELADYLLYSVADESTFR HHHEEEEEECCCCCEEEEEEECCCCCEEEEEEEEEEECCCHHHHHHHHHHHHHHCCHHHH SSSIASRTAQHAITDLLFMGILQQKEHANDLILESRALIGQLNKGR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA