| Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
|---|---|
| Accession | NC_002663 |
| Length | 2,257,487 |
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The map label for this gene is 15603431
Identifier: 15603431
GI number: 15603431
Start: 1773304
End: 1774017
Strand: Direct
Name: 15603431
Synonym: PM1566
Alternate gene names: NA
Gene position: 1773304-1774017 (Clockwise)
Preceding gene: 15603430
Following gene: 15603432
Centisome position: 78.55
GC content: 38.8
Gene sequence:
>714_bases ATGACATTAAAACATCTTGCTTGGATATTCCTTGCGTTACCAATTGCGCTGAATGCGCAACCTGTAGACAATAAACTACA ACATAATCAAGTTCAGTTCAGTGCTGAAGTGGTCAAAGAAATTGATAAAGATGAGTTGCAAGTAACACTTTATTTACAAG AAGAAGGGAAAGATGCGAGCGCATTAAATCAACTCATTGTGGCACGTATGAATCAGGCGCTTGATGCCGTGAAAAAACAC AGTACAGTACAGGTTGTTTCTCAACAACGTTACACACAAGTGCGTTATGGAAAAGAGGGGAAACAAAATGGTTGGATTGA TCGCGCTGAAATCGTGCTAAAAAGTCAAGATATGCCAATGTTGTCGAAACTGGTGGCAGAGTTAAATGAGCATTTTAAAA TTGGCGGTATGTATGCCACCGTGTCTGAAGAAAGTTTAGCGCGTGTGGAAAAAGAAATGACCGAAGCTGTATTGCAAAAG TTTGAGCAAAAAGCACAATTGATTCAGTCTTTAATGAAAGCAAAAGGTTATCGTTTAATTGAATTGGATTTATCTCCTCA TGATGTGATGGGCTCAACAAGAAGCTATGCGGTATCGATGAAAAGTAAAGACGCTTTTTATAGTTCTTCTGCAGATCACG AAATGGCCCTTGAAGGTGGCAAAACAAAATTAAGAGCCGTTGTGCAAGCGAAAATTGAATTAATCAACGATTAG
Upstream 100 bases:
>100_bases CCGCACTTTTGGCAACCTGTTGAAAGTGCGGTTTTATTTTGAACTATTTTGTTTACTTTCTGCCTAACAAAGAGTGACTT TACATCATAGGAAAAACGTT
Downstream 100 bases:
>100_bases CTTTCTAAGCAATGATATTTCTTATACAATACACGAATTCATTCGCGAAAAATTGGAGTAATAATGAAAATTGCAAAAAA TGTTGTAGTGAGCATTGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 237; Mature: 236
Protein sequence:
>237_residues MTLKHLAWIFLALPIALNAQPVDNKLQHNQVQFSAEVVKEIDKDELQVTLYLQEEGKDASALNQLIVARMNQALDAVKKH STVQVVSQQRYTQVRYGKEGKQNGWIDRAEIVLKSQDMPMLSKLVAELNEHFKIGGMYATVSEESLARVEKEMTEAVLQK FEQKAQLIQSLMKAKGYRLIELDLSPHDVMGSTRSYAVSMKSKDAFYSSSADHEMALEGGKTKLRAVVQAKIELIND
Sequences:
>Translated_237_residues MTLKHLAWIFLALPIALNAQPVDNKLQHNQVQFSAEVVKEIDKDELQVTLYLQEEGKDASALNQLIVARMNQALDAVKKH STVQVVSQQRYTQVRYGKEGKQNGWIDRAEIVLKSQDMPMLSKLVAELNEHFKIGGMYATVSEESLARVEKEMTEAVLQK FEQKAQLIQSLMKAKGYRLIELDLSPHDVMGSTRSYAVSMKSKDAFYSSSADHEMALEGGKTKLRAVVQAKIELIND >Mature_236_residues TLKHLAWIFLALPIALNAQPVDNKLQHNQVQFSAEVVKEIDKDELQVTLYLQEEGKDASALNQLIVARMNQALDAVKKHS TVQVVSQQRYTQVRYGKEGKQNGWIDRAEIVLKSQDMPMLSKLVAELNEHFKIGGMYATVSEESLARVEKEMTEAVLQKF EQKAQLIQSLMKAKGYRLIELDLSPHDVMGSTRSYAVSMKSKDAFYSSSADHEMALEGGKTKLRAVVQAKIELIND
Specific function: Unknown
COG id: COG3471
COG function: function code S; Predicted periplasmic/secreted protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26707; Mature: 26576
Theoretical pI: Translated: 7.18; Mature: 7.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLKHLAWIFLALPIALNAQPVDNKLQHNQVQFSAEVVKEIDKDELQVTLYLQEEGKDAS CCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHH ALNQLIVARMNQALDAVKKHSTVQVVSQQRYTQVRYGKEGKQNGWIDRAEIVLKSQDMPM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHEECCCCCHH LSKLVAELNEHFKIGGMYATVSEESLARVEKEMTEAVLQKFEQKAQLIQSLMKAKGYRLI HHHHHHHHHHCEEECCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE ELDLSPHDVMGSTRSYAVSMKSKDAFYSSSADHEMALEGGKTKLRAVVQAKIELIND EEECCCHHHCCCCHHEEEEECCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure TLKHLAWIFLALPIALNAQPVDNKLQHNQVQFSAEVVKEIDKDELQVTLYLQEEGKDAS CHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHH ALNQLIVARMNQALDAVKKHSTVQVVSQQRYTQVRYGKEGKQNGWIDRAEIVLKSQDMPM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHEECCCCCHH LSKLVAELNEHFKIGGMYATVSEESLARVEKEMTEAVLQKFEQKAQLIQSLMKAKGYRLI HHHHHHHHHHCEEECCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE ELDLSPHDVMGSTRSYAVSMKSKDAFYSSSADHEMALEGGKTKLRAVVQAKIELIND EEECCCHHHCCCCHHEEEEECCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA