Click here to switch to the map view.

The map label for this gene is hslR [H]

Identifier: 15603411

GI number: 15603411

Start: 1749281

End: 1749703

Strand: Direct

Name: hslR [H]

Synonym: PM1546

Alternate gene names: 15603411

Gene position: 1749281-1749703 (Clockwise)

Preceding gene: 15603410

Following gene: 15603412

Centisome position: 77.49

GC content: 41.13

Gene sequence:

>423_bases
ATGGCGAAAAAGAATAACTGGCATGAAAAAGAGGATGATGTTCGCCTAGATAAATGGCTTTGGGCTGCCCGTTTTTATAA
AACACGTACTTTAGCAAAAGACATGATTGATGGCGGTAAAGTGCATTATAATGGGCAGCGCACGAAACCCAATAAAACGG
TTGAAATTGGTTGTGTGATCAAACTTCGTCAAGGTAATGACGAAAAAGAAGTGGAAGTGCTTGCGCTTTCTACGCAACGT
CGTGGGGCGCCAGAAGCACAATTGTTGTATCAAGAAACAGAAAAAAGCATTGAACAACGTGCGAAAATGGCGATTGCACG
TAAGATTAATGCATTAACGATGCCGCATCCTGATCGTCGCCCGAATAAAAAAGAGCGGCGTGATTTATTGAAATTTAAAC
ATCAAGATAGCTTTTCATCTTGA

Upstream 100 bases:

>100_bases
TACAGTTGGCGTGGAAAATCCAGACAGCAGTTTGCCAAACAAACGGTTCAAACGACATTTTTCAGTCAACAATTACCGCA
CTTTAGTGGAGTAAATAACA

Downstream 100 bases:

>100_bases
TGATGTGATTTACCTACTTTTCTTATTAAAGAAAGGAATATGGGGAAGCTGTGTGCTTGCCCTTAACCTGAATAAAGGCT
TTTTATGACAGACAACACAG

Product: hypothetical protein

Products: NA

Alternate protein names: HSP15 [H]

Number of amino acids: Translated: 140; Mature: 139

Protein sequence:

>140_residues
MAKKNNWHEKEDDVRLDKWLWAARFYKTRTLAKDMIDGGKVHYNGQRTKPNKTVEIGCVIKLRQGNDEKEVEVLALSTQR
RGAPEAQLLYQETEKSIEQRAKMAIARKINALTMPHPDRRPNKKERRDLLKFKHQDSFSS

Sequences:

>Translated_140_residues
MAKKNNWHEKEDDVRLDKWLWAARFYKTRTLAKDMIDGGKVHYNGQRTKPNKTVEIGCVIKLRQGNDEKEVEVLALSTQR
RGAPEAQLLYQETEKSIEQRAKMAIARKINALTMPHPDRRPNKKERRDLLKFKHQDSFSS
>Mature_139_residues
AKKNNWHEKEDDVRLDKWLWAARFYKTRTLAKDMIDGGKVHYNGQRTKPNKTVEIGCVIKLRQGNDEKEVEVLALSTQRR
GAPEAQLLYQETEKSIEQRAKMAIARKINALTMPHPDRRPNKKERRDLLKFKHQDSFSS

Specific function: Involved in the recycling of free 50S ribosomal subunits that still carry a nascent chain. Binds RNA more specifically than DNA. Binds with very high affinity to the free 50S ribosomal subunit. Does not bind it when it is part of the 70S ribosome [H]

COG id: COG1188

COG function: function code J; Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S4 RNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789803, Length=125, Percent_Identity=72, Blast_Score=196, Evalue=4e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002942 [H]

Pfam domain/function: PF01479 S4 [H]

EC number: NA

Molecular weight: Translated: 16445; Mature: 16314

Theoretical pI: Translated: 10.57; Mature: 10.57

Prosite motif: PS50889 S4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKKNNWHEKEDDVRLDKWLWAARFYKTRTLAKDMIDGGKVHYNGQRTKPNKTVEIGCVI
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCEEEEEEEE
KLRQGNDEKEVEVLALSTQRRGAPEAQLLYQETEKSIEQRAKMAIARKINALTMPHPDRR
EECCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PNKKERRDLLKFKHQDSFSS
CCHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
AKKNNWHEKEDDVRLDKWLWAARFYKTRTLAKDMIDGGKVHYNGQRTKPNKTVEIGCVI
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCEEEEEEEE
KLRQGNDEKEVEVLALSTQRRGAPEAQLLYQETEKSIEQRAKMAIARKINALTMPHPDRR
EECCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PNKKERRDLLKFKHQDSFSS
CCHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]