| Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
|---|---|
| Accession | NC_002663 |
| Length | 2,257,487 |
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The map label for this gene is yjgR [H]
Identifier: 15603300
GI number: 15603300
Start: 1620927
End: 1622426
Strand: Reverse
Name: yjgR [H]
Synonym: PM1435
Alternate gene names: 15603300
Gene position: 1622426-1620927 (Counterclockwise)
Preceding gene: 15603302
Following gene: 15603298
Centisome position: 71.87
GC content: 44.0
Gene sequence:
>1500_bases ATGCAATATCTTTTATCGCAAACAGAACAAGGACAACAACTGGGGATCACCGCCAAAATGGCAAATCGACATGGTTTAAT TGCGGGAGCAACCGGGACTGGGAAAACGGTTACCTTACGTACCATGGCAGAAGCTTTTAGTGATGACGGTGTGCCGGTCT TTTTAGTGGATGTCAAAGGCGATTTATCTGGTTTAGTCAAAGCCGGTCAATTTCAAGGAAAAATTGCTGAGCGTATTGAG CAATTTGGCTTGGGTGGCGAAGGCTACCTTAATGGCTATCCTGTTTCATTTTGGGATGTGTTTGGCGAAACGGGTATTCC GCTTCGTACTACAATTTCAGAAATGGGACCTTTACTGTTATCGCGTCTTTTAAATCTGAATGCCACGCAAGAAGGGCTAT TGAATTTAGTGTTCCGTGTTGCAGATGATAAAGGGTTATTGCTGATAGATTTAAAAGATTTACGTGCGATGTTGAAATAT GTAGCAGACAATGCCAAAACGTTCCAATTGGAATACGGTAATGTTTCAGCTGCCAGTGTGGGGGCGATTCAGCGTGCCTT GCTTACCCTTGAAAATCAAGGGGCTGCAAATTTGTTTGGCGAGCCCGCACTGAATTTAGAAGATTGGTTACAAACGCGAG ATGGGCGTGGTGTCATCAATGTGCTGAATTCGGAAAAATTAATTAATTCACCAAAAATGTACAGTGCCTTTTTACTCTGG CTCATGTCAGAGTTATTCGAGACTTTACCTGAAGTCGGTGATCCGGAAAAGCCGAAATTTGTGATGTTCTTTGATGAAGC ACATTTATTGTTTGATGGTGCCCCCGCCGTGTTGGTGGATAAAGTGGAACAAGTGGTGCGTTTAATTCGTTCTAAAGGCG TTGGTGTGTATTTTGTGACGCAAAACCCATTAGATTTGCCGGATACGGTGTTAGGTCAGCTTGGTAACCGTGTACAGCAC GCCTTACGTGCCTTCACGCCACGAGATCAAAAAGCGGTAAAAGCTGCCGCCGAAACGTTCCGCACTAATCCAAAGATTAA TGTAACGGAAACGATCACCAGTCTTGGTGTGGGACAAGCGTTGGTGTCTTTTTTGGATGAAAAAGGGATGCCGATCCCCG TCGAAGTAGCGTTTATTTTCCCGCCACGTAGCCAGCTAAAACCGATTGCACAAGAAGAACGCGATGCTTGGGTTAAAGAC GATGATATTTATCCTTTTTACCGTGAATTGATTGATAATGAGTCTGCCTTTGAAGTGTTAAATCAACAAGCAGATCTTGC TGCTGTTGCGCAAAAGCAAGCAGAGCAAGCACAACAAGAAGAGGAAAGTGGTTTAATGGGCAGTTTAAGTCGCATGATTT TTGGTACGAAAAAACGCGGTGAGAAACTGACTGTGACAGAAGAAATTGTTAGTGGTGTGGCGAAATCAGTTGGACGTAGC ATCCGTACTCAAGTGACCAAGCAAATCATGCGTGGTATTTTGGGGGCATTGAAGAAATAA
Upstream 100 bases:
>100_bases TCAATTTGTGAGTCATTCGTGATTTTTGCTTTTCACATTTTGACCCGCTTGTTTTTTTTCCTTATGATGAACCGATCATT TTTTGTTTAAGGGCAATTTT
Downstream 100 bases:
>100_bases AGTGCGGTCATTTTTAAGCAAGTTTTACGAGACGTGTTGAAGTCATCGACAAAAAACGCGGTTTGATTCAATATCAAACC GCGTTTTTGTCTTCTAATGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 499; Mature: 499
Protein sequence:
>499_residues MQYLLSQTEQGQQLGITAKMANRHGLIAGATGTGKTVTLRTMAEAFSDDGVPVFLVDVKGDLSGLVKAGQFQGKIAERIE QFGLGGEGYLNGYPVSFWDVFGETGIPLRTTISEMGPLLLSRLLNLNATQEGLLNLVFRVADDKGLLLIDLKDLRAMLKY VADNAKTFQLEYGNVSAASVGAIQRALLTLENQGAANLFGEPALNLEDWLQTRDGRGVINVLNSEKLINSPKMYSAFLLW LMSELFETLPEVGDPEKPKFVMFFDEAHLLFDGAPAVLVDKVEQVVRLIRSKGVGVYFVTQNPLDLPDTVLGQLGNRVQH ALRAFTPRDQKAVKAAAETFRTNPKINVTETITSLGVGQALVSFLDEKGMPIPVEVAFIFPPRSQLKPIAQEERDAWVKD DDIYPFYRELIDNESAFEVLNQQADLAAVAQKQAEQAQQEEESGLMGSLSRMIFGTKKRGEKLTVTEEIVSGVAKSVGRS IRTQVTKQIMRGILGALKK
Sequences:
>Translated_499_residues MQYLLSQTEQGQQLGITAKMANRHGLIAGATGTGKTVTLRTMAEAFSDDGVPVFLVDVKGDLSGLVKAGQFQGKIAERIE QFGLGGEGYLNGYPVSFWDVFGETGIPLRTTISEMGPLLLSRLLNLNATQEGLLNLVFRVADDKGLLLIDLKDLRAMLKY VADNAKTFQLEYGNVSAASVGAIQRALLTLENQGAANLFGEPALNLEDWLQTRDGRGVINVLNSEKLINSPKMYSAFLLW LMSELFETLPEVGDPEKPKFVMFFDEAHLLFDGAPAVLVDKVEQVVRLIRSKGVGVYFVTQNPLDLPDTVLGQLGNRVQH ALRAFTPRDQKAVKAAAETFRTNPKINVTETITSLGVGQALVSFLDEKGMPIPVEVAFIFPPRSQLKPIAQEERDAWVKD DDIYPFYRELIDNESAFEVLNQQADLAAVAQKQAEQAQQEEESGLMGSLSRMIFGTKKRGEKLTVTEEIVSGVAKSVGRS IRTQVTKQIMRGILGALKK >Mature_499_residues MQYLLSQTEQGQQLGITAKMANRHGLIAGATGTGKTVTLRTMAEAFSDDGVPVFLVDVKGDLSGLVKAGQFQGKIAERIE QFGLGGEGYLNGYPVSFWDVFGETGIPLRTTISEMGPLLLSRLLNLNATQEGLLNLVFRVADDKGLLLIDLKDLRAMLKY VADNAKTFQLEYGNVSAASVGAIQRALLTLENQGAANLFGEPALNLEDWLQTRDGRGVINVLNSEKLINSPKMYSAFLLW LMSELFETLPEVGDPEKPKFVMFFDEAHLLFDGAPAVLVDKVEQVVRLIRSKGVGVYFVTQNPLDLPDTVLGQLGNRVQH ALRAFTPRDQKAVKAAAETFRTNPKINVTETITSLGVGQALVSFLDEKGMPIPVEVAFIFPPRSQLKPIAQEERDAWVKD DDIYPFYRELIDNESAFEVLNQQADLAAVAQKQAEQAQQEEESGLMGSLSRMIFGTKKRGEKLTVTEEIVSGVAKSVGRS IRTQVTKQIMRGILGALKK
Specific function: Unknown
COG id: COG0433
COG function: function code R; Predicted ATPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli yjiB [H]
Homologues:
Organism=Escherichia coli, GI1790714, Length=483, Percent_Identity=55.6935817805383, Blast_Score=518, Evalue=1e-148,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008571 [H]
Pfam domain/function: PF05872 DUF853 [H]
EC number: NA
Molecular weight: Translated: 54765; Mature: 54765
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQYLLSQTEQGQQLGITAKMANRHGLIAGATGTGKTVTLRTMAEAFSDDGVPVFLVDVKG CCCHHCCCCCCCCCCEEEEECCCCCEEEECCCCCCEEEHHHHHHHHCCCCCEEEEEECCC DLSGLVKAGQFQGKIAERIEQFGLGGEGYLNGYPVSFWDVFGETGIPLRTTISEMGPLLL CHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHH SRLLNLNATQEGLLNLVFRVADDKGLLLIDLKDLRAMLKYVADNAKTFQLEYGNVSAASV HHHHCCCCCHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHCCCEEEEEECCCCCHHHH GAIQRALLTLENQGAANLFGEPALNLEDWLQTRDGRGVINVLNSEKLINSPKMYSAFLLW HHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEECCCHHHHCCCHHHHHHHHH LMSELFETLPEVGDPEKPKFVMFFDEAHLLFDGAPAVLVDKVEQVVRLIRSKGVGVYFVT HHHHHHHHHHCCCCCCCCEEEEEECCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEE QNPLDLPDTVLGQLGNRVQHALRAFTPRDQKAVKAAAETFRTNPKINVTETITSLGVGQA CCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH LVSFLDEKGMPIPVEVAFIFPPRSQLKPIAQEERDAWVKDDDIYPFYRELIDNESAFEVL HHHHHHHCCCCCEEEEEEEECCHHHCCCHHHHHHCCCCCCCCCCHHHHHHHCCHHHHHHH NQQADLAAVAQKQAEQAQQEEESGLMGSLSRMIFGTKKRGEKLTVTEEIVSGVAKSVGRS HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHH IRTQVTKQIMRGILGALKK HHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MQYLLSQTEQGQQLGITAKMANRHGLIAGATGTGKTVTLRTMAEAFSDDGVPVFLVDVKG CCCHHCCCCCCCCCCEEEEECCCCCEEEECCCCCCEEEHHHHHHHHCCCCCEEEEEECCC DLSGLVKAGQFQGKIAERIEQFGLGGEGYLNGYPVSFWDVFGETGIPLRTTISEMGPLLL CHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHH SRLLNLNATQEGLLNLVFRVADDKGLLLIDLKDLRAMLKYVADNAKTFQLEYGNVSAASV HHHHCCCCCHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHCCCEEEEEECCCCCHHHH GAIQRALLTLENQGAANLFGEPALNLEDWLQTRDGRGVINVLNSEKLINSPKMYSAFLLW HHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEECCCHHHHCCCHHHHHHHHH LMSELFETLPEVGDPEKPKFVMFFDEAHLLFDGAPAVLVDKVEQVVRLIRSKGVGVYFVT HHHHHHHHHHCCCCCCCCEEEEEECCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEE QNPLDLPDTVLGQLGNRVQHALRAFTPRDQKAVKAAAETFRTNPKINVTETITSLGVGQA CCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH LVSFLDEKGMPIPVEVAFIFPPRSQLKPIAQEERDAWVKDDDIYPFYRELIDNESAFEVL HHHHHHHCCCCCEEEEEEEECCHHHCCCHHHHHHCCCCCCCCCCHHHHHHHCCHHHHHHH NQQADLAAVAQKQAEQAQQEEESGLMGSLSRMIFGTKKRGEKLTVTEEIVSGVAKSVGRS HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHH IRTQVTKQIMRGILGALKK HHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503 [H]