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The map label for this gene is yggU [C]

Identifier: 15603178

GI number: 15603178

Start: 1506945

End: 1507244

Strand: Reverse

Name: yggU [C]

Synonym: PM1313

Alternate gene names: 15603178

Gene position: 1507244-1506945 (Counterclockwise)

Preceding gene: 15603179

Following gene: 15603176

Centisome position: 66.77

GC content: 42.33

Gene sequence:

>300_bases
GTGACACAGCTACCCGCAGTAGAAAAACAAGAAGAACACTTACGGTTGCGGATTTTTCTGCAACCGAAAGCCAGTAAAGA
TCAGATCGTCGGTTTACACGACAATGAACTCAAAATCACCATCACCGCCCCGCCGATTGACGGACAAGCTAACGCCCACT
TACTCAAATTTTTAAGCAAAACCTTTAAAGTGCCGAAAAGTAGCATTGTCTTGGAAAAAGGTGAGCTAAATAGACATAAA
CAGATTCTGATTCCTAATCCGAAAGTGATCCCAACCGAAGTGAATGTCTTATTGAAGTGA

Upstream 100 bases:

>100_bases
TTCTTTTCCTATTAAATAGTTTATTAGGCGATCTCTTCGATGTGTACTGGGCATTAGCCAGTTACTAAAAAGTGCGGTCG
ATTGTTAGGAAATTTGCGTT

Downstream 100 bases:

>100_bases
TTCTGTTTAGAAATCCGATCTCTAGTAGAGCGACACTGTAATAGGCTTGTAACCATGTAAAACGTACTGAAATTGAGCGT
CAACGCTGCTTAACATGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 99; Mature: 98

Protein sequence:

>99_residues
MTQLPAVEKQEEHLRLRIFLQPKASKDQIVGLHDNELKITITAPPIDGQANAHLLKFLSKTFKVPKSSIVLEKGELNRHK
QILIPNPKVIPTEVNVLLK

Sequences:

>Translated_99_residues
MTQLPAVEKQEEHLRLRIFLQPKASKDQIVGLHDNELKITITAPPIDGQANAHLLKFLSKTFKVPKSSIVLEKGELNRHK
QILIPNPKVIPTEVNVLLK
>Mature_98_residues
TQLPAVEKQEEHLRLRIFLQPKASKDQIVGLHDNELKITITAPPIDGQANAHLLKFLSKTFKVPKSSIVLEKGELNRHKQ
ILIPNPKVIPTEVNVLLK

Specific function: Unknown

COG id: COG1872

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0235 family

Homologues:

Organism=Escherichia coli, GI87082189, Length=95, Percent_Identity=58.9473684210526, Blast_Score=121, Evalue=8e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1313_PASMU (Q9CLC6)

Other databases:

- EMBL:   AE004439
- RefSeq:   NP_246251.1
- ProteinModelPortal:   Q9CLC6
- SMR:   Q9CLC6
- GeneID:   1244660
- GenomeReviews:   AE004439_GR
- KEGG:   pmu:PM1313
- NMPDR:   fig|272843.1.peg.1314
- HOGENOM:   HBG472132
- OMA:   KASRDKI
- ProtClustDB:   PRK05090
- BioCyc:   PMUL272843:PM1313-MONOMER
- HAMAP:   MF_00634
- InterPro:   IPR005228
- InterPro:   IPR003746
- Gene3D:   G3DSA:3.30.1200.10
- TIGRFAMs:   TIGR00251

Pfam domain/function: PF02594 DUF167; SSF69786 DUF167

EC number: NA

Molecular weight: Translated: 11188; Mature: 11057

Theoretical pI: Translated: 10.50; Mature: 10.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQLPAVEKQEEHLRLRIFLQPKASKDQIVGLHDNELKITITAPPIDGQANAHLLKFLSK
CCCCCCCCCCCCCEEEEEEECCCCCCCCEEEECCCCEEEEEECCCCCCCCCHHHHHHHHH
TFKVPKSSIVLEKGELNRHKQILIPNPKVIPTEVNVLLK
HHCCCCCCEEEECCCCCCCCEEEECCCCEECCEEEEEEC
>Mature Secondary Structure 
TQLPAVEKQEEHLRLRIFLQPKASKDQIVGLHDNELKITITAPPIDGQANAHLLKFLSK
CCCCCCCCCCCCEEEEEEECCCCCCCCEEEECCCCEEEEEECCCCCCCCCHHHHHHHHH
TFKVPKSSIVLEKGELNRHKQILIPNPKVIPTEVNVLLK
HHCCCCCCEEEECCCCCCCCEEEECCCCEECCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11248100