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The map label for this gene is rfaQ [C]

Identifier: 15603159

GI number: 15603159

Start: 1488853

End: 1489899

Strand: Reverse

Name: rfaQ [C]

Synonym: PM1294

Alternate gene names: 15603159

Gene position: 1489899-1488853 (Counterclockwise)

Preceding gene: 15603160

Following gene: 15603157

Centisome position: 66.0

GC content: 42.02

Gene sequence:

>1047_bases
ATGCAAAAATTGTTAGTCGTGCGCAACGATAAACTCGGCGATTTTATGTTAGCTTGGCCGGCATTTGCGATGCTTAAGCA
ATCGAATCCTAGCTTAAAACTGACCGCACTTGTACCGAACTATACCGCAGACCTTGCTCGTCTGTGTCCGTATTTAGATG
ACGTGATTATTGATGTGGGTAAGAAGGCAGATAAAGCCGACCAACTGAAAACCTTACAAGCCATTAAAGCTGTGAAATTT
GATGCATCGATTAACTTTTTTTCAGATAAATACAATGCGTTGTTAGTCTGGAAAGCAGGGATTCCTTTCCGTTTAGCGCC
AGCCACCAAATTAATTCAATTTTTATACAATCATCGCGTCACGCAACGCCGTTCAAAATCGTTAAAACCTGAATTCGAAT
ATAATTTGGATCTTGCTCGTGCATTTTTACAAAAAACGCACTGCCCAATCGTGGAACCAACACCGCCGTATTTAACCTTT
GAGCAAAATGCCGTACAACATCAACGCGAAATGCTCAGTCAAACGCTTGGTCTAGCGTTAGAAAAAAAATGGATTTTTGT
TCATAGTGGATCAGGCGGTTCAGCGACGAATTTATCGTTAGAGCAATATGCACAACTCATTTTGGGTTTATTAAGTCAAT
TTGATTGCCAAATCGTGCTGACAGCAGGTCCTAATGAAAGTGAGAAAGCCCATTCACTTGCTAACTTGGTCAATCATCAC
AATGTGGTGGTTTATGATAAAAATGCAGGGCTAGTGGATTTTGCGCGTTCGTTAGCTTGCGCGGATCTGTTTATTGCCGG
CTCAACGGGTCCGCTACATTTAAGTGCGGCGCTGAATATTCCAACCATTGGATTTTATCCGAGTCGTCGTTCTGCGACCC
CTTTACGTTGGCAACCAATTAATGACCCTACTAAACATCTCGCTTTTTCCCCACAAACACAGGATAGAGAGAAACAAATG
GATCTGAGTCTCATTGATATTGATCAGGTATTAACACAAGCGATTCCCTTTGTGAAGACAATGTGGAAGCTTGAGCAAGC
ACAGTAA

Upstream 100 bases:

>100_bases
TCAAAGGACCATCAACTGACAAAGGTAACATTTACAATTAAATTTTGTGCAGAAAAAGAGTAGAATACTGAAACATGTTC
CCTTTAATTGAGAATAAAAA

Downstream 100 bases:

>100_bases
TGTGGCTTGCACGACCCAACCAATTGACACAGCAAACAGTACGGTACCAATTCCCAGTTTGCCTCCTAATAGAAACCCCA
ATACGCAAACACTAACCTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 348; Mature: 348

Protein sequence:

>348_residues
MQKLLVVRNDKLGDFMLAWPAFAMLKQSNPSLKLTALVPNYTADLARLCPYLDDVIIDVGKKADKADQLKTLQAIKAVKF
DASINFFSDKYNALLVWKAGIPFRLAPATKLIQFLYNHRVTQRRSKSLKPEFEYNLDLARAFLQKTHCPIVEPTPPYLTF
EQNAVQHQREMLSQTLGLALEKKWIFVHSGSGGSATNLSLEQYAQLILGLLSQFDCQIVLTAGPNESEKAHSLANLVNHH
NVVVYDKNAGLVDFARSLACADLFIAGSTGPLHLSAALNIPTIGFYPSRRSATPLRWQPINDPTKHLAFSPQTQDREKQM
DLSLIDIDQVLTQAIPFVKTMWKLEQAQ

Sequences:

>Translated_348_residues
MQKLLVVRNDKLGDFMLAWPAFAMLKQSNPSLKLTALVPNYTADLARLCPYLDDVIIDVGKKADKADQLKTLQAIKAVKF
DASINFFSDKYNALLVWKAGIPFRLAPATKLIQFLYNHRVTQRRSKSLKPEFEYNLDLARAFLQKTHCPIVEPTPPYLTF
EQNAVQHQREMLSQTLGLALEKKWIFVHSGSGGSATNLSLEQYAQLILGLLSQFDCQIVLTAGPNESEKAHSLANLVNHH
NVVVYDKNAGLVDFARSLACADLFIAGSTGPLHLSAALNIPTIGFYPSRRSATPLRWQPINDPTKHLAFSPQTQDREKQM
DLSLIDIDQVLTQAIPFVKTMWKLEQAQ
>Mature_348_residues
MQKLLVVRNDKLGDFMLAWPAFAMLKQSNPSLKLTALVPNYTADLARLCPYLDDVIIDVGKKADKADQLKTLQAIKAVKF
DASINFFSDKYNALLVWKAGIPFRLAPATKLIQFLYNHRVTQRRSKSLKPEFEYNLDLARAFLQKTHCPIVEPTPPYLTF
EQNAVQHQREMLSQTLGLALEKKWIFVHSGSGGSATNLSLEQYAQLILGLLSQFDCQIVLTAGPNESEKAHSLANLVNHH
NVVVYDKNAGLVDFARSLACADLFIAGSTGPLHLSAALNIPTIGFYPSRRSATPLRWQPINDPTKHLAFSPQTQDREKQM
DLSLIDIDQVLTQAIPFVKTMWKLEQAQ

Specific function: Lipopolysaccharide core biosynthesis. [C]

COG id: COG0859

COG function: function code M; ADP-heptose:LPS heptosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002201 [H]

Pfam domain/function: PF01075 Glyco_transf_9 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 39015; Mature: 39015

Theoretical pI: Translated: 9.26; Mature: 9.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKLLVVRNDKLGDFMLAWPAFAMLKQSNPSLKLTALVPNYTADLARLCPYLDDVIIDVG
CCCEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCC
KKADKADQLKTLQAIKAVKFDASINFFSDKYNALLVWKAGIPFRLAPATKLIQFLYNHRV
CCCCHHHHHHHHHHHHHHEECCEEEEECCCCCEEEEEECCCCEEECCHHHHHHHHHHHHH
TQRRSKSLKPEFEYNLDLARAFLQKTHCPIVEPTPPYLTFEQNAVQHQREMLSQTLGLAL
HHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHCCEE
EKKWIFVHSGSGGSATNLSLEQYAQLILGLLSQFDCQIVLTAGPNESEKAHSLANLVNHH
EEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHCC
NVVVYDKNAGLVDFARSLACADLFIAGSTGPLHLSAALNIPTIGFYPSRRSATPLRWQPI
EEEEEECCCCHHHHHHHHHHHHEEEECCCCCEEEEEEECCCEECCCCCCCCCCCEEEECC
NDPTKHLAFSPQTQDREKQMDLSLIDIDQVLTQAIPFVKTMWKLEQAQ
CCHHHHCEECCCCCCHHHHCCCEEECHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQKLLVVRNDKLGDFMLAWPAFAMLKQSNPSLKLTALVPNYTADLARLCPYLDDVIIDVG
CCCEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCC
KKADKADQLKTLQAIKAVKFDASINFFSDKYNALLVWKAGIPFRLAPATKLIQFLYNHRV
CCCCHHHHHHHHHHHHHHEECCEEEEECCCCCEEEEEECCCCEEECCHHHHHHHHHHHHH
TQRRSKSLKPEFEYNLDLARAFLQKTHCPIVEPTPPYLTFEQNAVQHQREMLSQTLGLAL
HHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHCCEE
EKKWIFVHSGSGGSATNLSLEQYAQLILGLLSQFDCQIVLTAGPNESEKAHSLANLVNHH
EEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHCC
NVVVYDKNAGLVDFARSLACADLFIAGSTGPLHLSAALNIPTIGFYPSRRSATPLRWQPI
EEEEEECCCCHHHHHHHHHHHHEEEECCCCCEEEEEEECCCEECCCCCCCCCCCEEEECC
NDPTKHLAFSPQTQDREKQMDLSLIDIDQVLTQAIPFVKTMWKLEQAQ
CCHHHHCEECCCCCCHHHHCCCEEECHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Transferring other glycosyl groups [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]