| Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
|---|---|
| Accession | NC_002663 |
| Length | 2,257,487 |
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The map label for this gene is hisD
Identifier: 15603063
GI number: 15603063
Start: 1392120
End: 1393406
Strand: Direct
Name: hisD
Synonym: PM1198
Alternate gene names: 15603063
Gene position: 1392120-1393406 (Clockwise)
Preceding gene: 15603062
Following gene: 15603064
Centisome position: 61.67
GC content: 45.61
Gene sequence:
>1287_bases ATGCAAACACTTATTTGGAATACGTTAAATTCAGCACAAAAACAAGCTGCACTTTCTCGCCCAGCTCAAGCCGTTGGTGA ACAAATTACGCAAGCCGTGAATGCGATCAAAAGCAATGTCATCAACAATGGGGATAAGGCATTATTTGAACTTGCGGAAA AATTCGATAAGACCACATTAGAAAGCCTTGTCATCTCAAAAGCCCAAGTTGAGCAAGCGAGCCAGCGTATTGCGACGGAA TTAAAACAAGCGATTCAAACCGCCAAAGGCAATATTGAACGTTTCCACCAAGCACAAAAAAACCAAACGGTGGATCTGGA AACCCAAGCCGGTGTGCGTTGCCAAGTCGTTACTCGCCCCATTCAAAACGTCGGTTTATATATCCCCGGTGGCTCTGCTC CACTGTTTTCCACAGTGTTAATGCTTGCCGTCCCTGCCAAAATTGCTGGCTGTAAAACCATTGTGCTGTGTTCCCCACCA CCTATTGCCGATGAAATTCTTTACACCGCCAATTTATGTGGTGTTGAAACCATTTATGCCATTGGAGGTGCTCAAGCCAT TTTTGCCATGGCAAACGGCACGGAAAGCGTGCAGAAAGTGGATAAAATTTTCGGTCCGGGCAATGCCTTTGTCACCGAAG CCAAACGTCAAGTATTACAACAAGGCACTGCGATTGATATGCCAGCCGGTCCCTCTGAAGTGTTAGTGATTGCTGATGAA TTTGCCGATCCAGATTTTGTCGCCAGCGATTTACTTTCCCAAGCAGAACATGGCTCAGACAGCCAAGTGATTTTAGTCAC TAACTGTGAAACGTTGGCAAAACAGACCGCACTTTCCATTGAGCAACAACTGGCTCGTTTACCAAGAGCAGAAACGGCTC GTAAGGCACTTGCTCACAGTCGCACCTTTATCGCCGAAGATCTGCAACAATGTGTAGAAATTAGTAATGCTTATGCGCCT GAACACTTGGTCGTACAGGTGGAAAATGCGCGTAACTTACTGCCGTTTTTAGATAACGCCGGCTCAATTTTCTTAGGGGC ATATTCGCCTGAAAGTATGGGCGATTATGCTAGTGGTACCAATCACGTTCTACCGACCTACGGCTATACTCGCACCCATT CAAGTTTAGGTTTAGCCGATTTTAGCAAACGGATGACAGTACAAGAACTCACCCCACAAGGCTTTAAAGATCTCGCGAAC ACGGTGATGTTAATGGCAGAAGCAGAACAATTAGAAGCGCATAAGCAAGCAGTGGCAATTCGTTTAGAGAAATTAACTCA GGAGTAA
Upstream 100 bases:
>100_bases GCATTAAAATGGTGGGATTGGGAGATTGAGAAAATCACGCGTAATCTTGACTTTTTAACTGGCAAAATCAGTGACCCGAT TGAGTAATCAAGGAAACAAT
Downstream 100 bases:
>100_bases GTCATGTCAATTTCATCACTTTCACGCAAAAATATTCAAGCCTTAACGCCGTATCAATCGGCTCGGCGATTAGGCGGCAA GGGCGATATTTGGTTAAATG
Product: histidinol dehydrogenase
Products: NA
Alternate protein names: HDH
Number of amino acids: Translated: 428; Mature: 428
Protein sequence:
>428_residues MQTLIWNTLNSAQKQAALSRPAQAVGEQITQAVNAIKSNVINNGDKALFELAEKFDKTTLESLVISKAQVEQASQRIATE LKQAIQTAKGNIERFHQAQKNQTVDLETQAGVRCQVVTRPIQNVGLYIPGGSAPLFSTVLMLAVPAKIAGCKTIVLCSPP PIADEILYTANLCGVETIYAIGGAQAIFAMANGTESVQKVDKIFGPGNAFVTEAKRQVLQQGTAIDMPAGPSEVLVIADE FADPDFVASDLLSQAEHGSDSQVILVTNCETLAKQTALSIEQQLARLPRAETARKALAHSRTFIAEDLQQCVEISNAYAP EHLVVQVENARNLLPFLDNAGSIFLGAYSPESMGDYASGTNHVLPTYGYTRTHSSLGLADFSKRMTVQELTPQGFKDLAN TVMLMAEAEQLEAHKQAVAIRLEKLTQE
Sequences:
>Translated_428_residues MQTLIWNTLNSAQKQAALSRPAQAVGEQITQAVNAIKSNVINNGDKALFELAEKFDKTTLESLVISKAQVEQASQRIATE LKQAIQTAKGNIERFHQAQKNQTVDLETQAGVRCQVVTRPIQNVGLYIPGGSAPLFSTVLMLAVPAKIAGCKTIVLCSPP PIADEILYTANLCGVETIYAIGGAQAIFAMANGTESVQKVDKIFGPGNAFVTEAKRQVLQQGTAIDMPAGPSEVLVIADE FADPDFVASDLLSQAEHGSDSQVILVTNCETLAKQTALSIEQQLARLPRAETARKALAHSRTFIAEDLQQCVEISNAYAP EHLVVQVENARNLLPFLDNAGSIFLGAYSPESMGDYASGTNHVLPTYGYTRTHSSLGLADFSKRMTVQELTPQGFKDLAN TVMLMAEAEQLEAHKQAVAIRLEKLTQE >Mature_428_residues MQTLIWNTLNSAQKQAALSRPAQAVGEQITQAVNAIKSNVINNGDKALFELAEKFDKTTLESLVISKAQVEQASQRIATE LKQAIQTAKGNIERFHQAQKNQTVDLETQAGVRCQVVTRPIQNVGLYIPGGSAPLFSTVLMLAVPAKIAGCKTIVLCSPP PIADEILYTANLCGVETIYAIGGAQAIFAMANGTESVQKVDKIFGPGNAFVTEAKRQVLQQGTAIDMPAGPSEVLVIADE FADPDFVASDLLSQAEHGSDSQVILVTNCETLAKQTALSIEQQLARLPRAETARKALAHSRTFIAEDLQQCVEISNAYAP EHLVVQVENARNLLPFLDNAGSIFLGAYSPESMGDYASGTNHVLPTYGYTRTHSSLGLADFSKRMTVQELTPQGFKDLAN TVMLMAEAEQLEAHKQAVAIRLEKLTQE
Specific function: Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
COG id: COG0141
COG function: function code E; Histidinol dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the histidinol dehydrogenase family
Homologues:
Organism=Escherichia coli, GI1788331, Length=425, Percent_Identity=64.9411764705882, Blast_Score=561, Evalue=1e-161, Organism=Saccharomyces cerevisiae, GI6319819, Length=422, Percent_Identity=49.7630331753554, Blast_Score=397, Evalue=1e-111,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HISX_PASMU (Q9CLM4)
Other databases:
- EMBL: AE004439 - RefSeq: NP_246135.1 - ProteinModelPortal: Q9CLM4 - SMR: Q9CLM4 - GeneID: 1244545 - GenomeReviews: AE004439_GR - KEGG: pmu:PM1198 - NMPDR: fig|272843.1.peg.1198 - HOGENOM: HBG329596 - OMA: LDAHKNA - ProtClustDB: PRK00877 - BioCyc: PMUL272843:PM1198-MONOMER - BRENDA: 1.1.1.23 - HAMAP: MF_01024 - InterPro: IPR016161 - InterPro: IPR022695 - InterPro: IPR001692 - InterPro: IPR012131 - PANTHER: PTHR21256:SF2 - PIRSF: PIRSF000099 - PRINTS: PR00083 - TIGRFAMs: TIGR00069
Pfam domain/function: PF00815 Histidinol_dh; SSF53720 Aldehyde_DH/Histidinol_DH
EC number: =1.1.1.23
Molecular weight: Translated: 46150; Mature: 46150
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: PS00611 HISOL_DEHYDROGENASE
Important sites: ACT_SITE 321-321 ACT_SITE 322-322 BINDING 127-127 BINDING 185-185 BINDING 208-208 BINDING 232-232 BINDING 254-254 BINDING 257-257 BINDING 322-322 BINDING 355-355 BINDING 409-409 BINDING 414-414
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTLIWNTLNSAQKQAALSRPAQAVGEQITQAVNAIKSNVINNGDKALFELAEKFDKTTL CCCEEHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH ESLVISKAQVEQASQRIATELKQAIQTAKGNIERFHQAQKNQTVDLETQAGVRCQVVTRP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCEEEECCCCCEEEEEECC IQNVGLYIPGGSAPLFSTVLMLAVPAKIAGCKTIVLCSPPPIADEILYTANLCGVETIYA HHHCCEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCHHHHHH IGGAQAIFAMANGTESVQKVDKIFGPGNAFVTEAKRQVLQQGTAIDMPAGPSEVLVIADE HCCHHHEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEECCCCCCCCEEEEECC FADPDFVASDLLSQAEHGSDSQVILVTNCETLAKQTALSIEQQLARLPRAETARKALAHS CCCCHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH RTFIAEDLQQCVEISNAYAPEHLVVQVENARNLLPFLDNAGSIFLGAYSPESMGDYASGT HHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHCCCCCEEEECCCCCCCCCCCCCC NHVLPTYGYTRTHSSLGLADFSKRMTVQELTPQGFKDLANTVMLMAEAEQLEAHKQAVAI CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RLEKLTQE HHHHHHCC >Mature Secondary Structure MQTLIWNTLNSAQKQAALSRPAQAVGEQITQAVNAIKSNVINNGDKALFELAEKFDKTTL CCCEEHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH ESLVISKAQVEQASQRIATELKQAIQTAKGNIERFHQAQKNQTVDLETQAGVRCQVVTRP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCEEEECCCCCEEEEEECC IQNVGLYIPGGSAPLFSTVLMLAVPAKIAGCKTIVLCSPPPIADEILYTANLCGVETIYA HHHCCEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCHHHHHH IGGAQAIFAMANGTESVQKVDKIFGPGNAFVTEAKRQVLQQGTAIDMPAGPSEVLVIADE HCCHHHEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEECCCCCCCCEEEEECC FADPDFVASDLLSQAEHGSDSQVILVTNCETLAKQTALSIEQQLARLPRAETARKALAHS CCCCHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH RTFIAEDLQQCVEISNAYAPEHLVVQVENARNLLPFLDNAGSIFLGAYSPESMGDYASGT HHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHCCCCCEEEECCCCCCCCCCCCCC NHVLPTYGYTRTHSSLGLADFSKRMTVQELTPQGFKDLANTVMLMAEAEQLEAHKQAVAI CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RLEKLTQE HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11248100