Click here to switch to the map view.

The map label for this gene is ycaL [H]

Identifier: 15603055

GI number: 15603055

Start: 1384711

End: 1385484

Strand: Reverse

Name: ycaL [H]

Synonym: PM1190

Alternate gene names: 15603055

Gene position: 1385484-1384711 (Counterclockwise)

Preceding gene: 15603056

Following gene: 15603048

Centisome position: 61.37

GC content: 43.8

Gene sequence:

>774_bases
ATGATGAAATTGACTAAAAGGTTACTATGGGTGCCTGCTTTCGCCTTGATATTGCATGCTTGTGCGGATTCTGCCAGCAT
TAATCAATACTCTGCGTCTTCTTATCGACAAACGATTAATGAGGCTCGTAGTAAAGGTGTGTTAGATACGTCCTCTGCTA
CGGCCAAACGTATCCATGCGATATTCAATAAAATGGTGCCTTATGCGAATGCAGAAAATCAGACAGGGCAACCTTTCCAT
TGGCAGATGAGTGTAATCAAATCAAAAGAATTAAATGCTTGGGCGATGCCGGGCGGCAAAATGGCATTCTATACGGGATT
AGTGGATACATTGCAATTAACCAATGATGAAATTGCGACAGTGATTGGTCATGAAATGGCACATGCGCTGAAAGAGCATG
GTAAGAAAAAAGTCAATATGGGGCAATTTACGGATGTGTTAGCACAAGTCAGTCATATTGCACTTTCTAGTGCAATTGGT
AGTGATGGCAGTGCGATGGTGGTTGGTTTGACCAAAGATTGGGCGCTAGATAAACCTTATTCACGTAGCAATGAAACCGA
AGCGGATGAGGTTGGACTTATGTTGATGGCAAAATCCGGCTTTAATCCACAGGCTGCTCCTCGTGTGTGGGAAAAAATGC
AACGGGCATCATCAGGCAGCCGTGGTGTATTAGCTGCGTTATCTTCTACCCACCCAAACGATGCAGAACGCCAGAAAAAT
TTATTACGCCTCATGCCAAAAGCCATGGAGCTCTACCAGAATGCAGCAAAATAA

Upstream 100 bases:

>100_bases
AGAAATTTTAGATTCATTTGAACGTGCAAAAAAATAACATTTTTGTTTTAATACCGCTTGAAAGAGCGGTATTTTTTTAT
CTAAATTGAGTGAGGACTTT

Downstream 100 bases:

>100_bases
TTATTTCGCTTCGCTTTGATAAATAAAAGAAAATGGGTTAATCCATAAAATTTGGATTAACCCATTTTCATTATAAGCTA
TCAATAAATCCTTGTTAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MMKLTKRLLWVPAFALILHACADSASINQYSASSYRQTINEARSKGVLDTSSATAKRIHAIFNKMVPYANAENQTGQPFH
WQMSVIKSKELNAWAMPGGKMAFYTGLVDTLQLTNDEIATVIGHEMAHALKEHGKKKVNMGQFTDVLAQVSHIALSSAIG
SDGSAMVVGLTKDWALDKPYSRSNETEADEVGLMLMAKSGFNPQAAPRVWEKMQRASSGSRGVLAALSSTHPNDAERQKN
LLRLMPKAMELYQNAAK

Sequences:

>Translated_257_residues
MMKLTKRLLWVPAFALILHACADSASINQYSASSYRQTINEARSKGVLDTSSATAKRIHAIFNKMVPYANAENQTGQPFH
WQMSVIKSKELNAWAMPGGKMAFYTGLVDTLQLTNDEIATVIGHEMAHALKEHGKKKVNMGQFTDVLAQVSHIALSSAIG
SDGSAMVVGLTKDWALDKPYSRSNETEADEVGLMLMAKSGFNPQAAPRVWEKMQRASSGSRGVLAALSSTHPNDAERQKN
LLRLMPKAMELYQNAAK
>Mature_257_residues
MMKLTKRLLWVPAFALILHACADSASINQYSASSYRQTINEARSKGVLDTSSATAKRIHAIFNKMVPYANAENQTGQPFH
WQMSVIKSKELNAWAMPGGKMAFYTGLVDTLQLTNDEIATVIGHEMAHALKEHGKKKVNMGQFTDVLAQVSHIALSSAIG
SDGSAMVVGLTKDWALDKPYSRSNETEADEVGLMLMAKSGFNPQAAPRVWEKMQRASSGSRGVLAALSSTHPNDAERQKN
LLRLMPKAMELYQNAAK

Specific function: Unknown

COG id: COG0501

COG function: function code O; Zn-dependent protease with chaperone function

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M48B family [H]

Homologues:

Organism=Homo sapiens, GI21686999, Length=177, Percent_Identity=28.2485875706215, Blast_Score=94, Evalue=2e-19,
Organism=Escherichia coli, GI87081800, Length=259, Percent_Identity=26.6409266409266, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI87082185, Length=208, Percent_Identity=29.3269230769231, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI1788840, Length=222, Percent_Identity=27.4774774774775, Blast_Score=68, Evalue=6e-13,
Organism=Saccharomyces cerevisiae, GI6322940, Length=240, Percent_Identity=29.5833333333333, Blast_Score=100, Evalue=2e-22,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915 [H]

Pfam domain/function: PF01435 Peptidase_M48 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 28153; Mature: 28153

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKLTKRLLWVPAFALILHACADSASINQYSASSYRQTINEARSKGVLDTSSATAKRIHA
CCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
IFNKMVPYANAENQTGQPFHWQMSVIKSKELNAWAMPGGKMAFYTGLVDTLQLTNDEIAT
HHHHHCCCCCCCCCCCCCEEHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHCCHHHHH
VIGHEMAHALKEHGKKKVNMGQFTDVLAQVSHIALSSAIGSDGSAMVVGLTKDWALDKPY
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCC
SRSNETEADEVGLMLMAKSGFNPQAAPRVWEKMQRASSGSRGVLAALSSTHPNDAERQKN
CCCCCCCHHHHCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEHHCCCCCHHHHHHH
LLRLMPKAMELYQNAAK
HHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MMKLTKRLLWVPAFALILHACADSASINQYSASSYRQTINEARSKGVLDTSSATAKRIHA
CCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
IFNKMVPYANAENQTGQPFHWQMSVIKSKELNAWAMPGGKMAFYTGLVDTLQLTNDEIAT
HHHHHCCCCCCCCCCCCCEEHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHCCHHHHH
VIGHEMAHALKEHGKKKVNMGQFTDVLAQVSHIALSSAIGSDGSAMVVGLTKDWALDKPY
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCC
SRSNETEADEVGLMLMAKSGFNPQAAPRVWEKMQRASSGSRGVLAALSSTHPNDAERQKN
CCCCCCCHHHHCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEHHCCCCCHHHHHHH
LLRLMPKAMELYQNAAK
HHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Zn [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 7836281 [H]