| Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
|---|---|
| Accession | NC_002663 |
| Length | 2,257,487 |
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The map label for this gene is 15603054
Identifier: 15603054
GI number: 15603054
Start: 1384146
End: 1384616
Strand: Direct
Name: 15603054
Synonym: PM1189
Alternate gene names: NA
Gene position: 1384146-1384616 (Clockwise)
Preceding gene: 15603053
Following gene: 15603057
Centisome position: 61.31
GC content: 41.61
Gene sequence:
>471_bases ATGACTGAAAAACGGCTTGCCCAAATCAGTGTTGTACTGAGTACAATCATCATCATGACTTATGCTTTTCTCAGTAGCTA TTTTTTAAATAAGCCACTCAATTTGTCTTCTGCTGACTTAATGTACTTTGCGCTATCCAATCTTCTCTCTCTTAGCTTGC CTTTCGTTTGCGCTTGGTTCCCCTATCTTTTTGTCCGTCCTGCCGCGGTAACAGGAAGCGCCCTATCTGCGTTTGGATTG TTTCTTTTCTTCGCGATAACAAGCAGTACTATGGATGATCCTAAAGGCGCTGCCGCAATATGGGTGATTTATTTTTTCTG GCTTATTGGTGCTGCACTGGCTGGAGTTTATCCTGCATTATTTAAACCTCACTTTTTTACTAAGACCGCTACTCGTGCAC TGGTATTAAGTGCCTTATTTACTGTCGTTGTCAGTTTTATCATTGGGTTTTTGATTAGTCGGATCGCCTAA
Upstream 100 bases:
>100_bases TACTTATCTAGGACATCTTTCATAAAAACTTGTGCATTTTTTATCTTCCTATTAGGATATCTAACGATTATCTTCTGCTC ATCAATAAGGTAAATAAAAA
Downstream 100 bases:
>100_bases CAAGGATTTATTGATAGCTTATAATGAAAATGGGTTAATCCAAATTTTATGGATTAACCCATTTTCTTTTATTTATCAAA GCGAAGCGAAATAATTATTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 156; Mature: 155
Protein sequence:
>156_residues MTEKRLAQISVVLSTIIIMTYAFLSSYFLNKPLNLSSADLMYFALSNLLSLSLPFVCAWFPYLFVRPAAVTGSALSAFGL FLFFAITSSTMDDPKGAAAIWVIYFFWLIGAALAGVYPALFKPHFFTKTATRALVLSALFTVVVSFIIGFLISRIA
Sequences:
>Translated_156_residues MTEKRLAQISVVLSTIIIMTYAFLSSYFLNKPLNLSSADLMYFALSNLLSLSLPFVCAWFPYLFVRPAAVTGSALSAFGL FLFFAITSSTMDDPKGAAAIWVIYFFWLIGAALAGVYPALFKPHFFTKTATRALVLSALFTVVVSFIIGFLISRIA >Mature_155_residues TEKRLAQISVVLSTIIIMTYAFLSSYFLNKPLNLSSADLMYFALSNLLSLSLPFVCAWFPYLFVRPAAVTGSALSAFGLF LFFAITSSTMDDPKGAAAIWVIYFFWLIGAALAGVYPALFKPHFFTKTATRALVLSALFTVVVSFIIGFLISRIA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1189_PASMU (Q9CLN1)
Other databases:
- EMBL: AE004439 - RefSeq: NP_246126.1 - GeneID: 1244536 - GenomeReviews: AE004439_GR - KEGG: pmu:PM1189 - NMPDR: fig|272843.1.peg.1189 - BioCyc: PMUL272843:PM1189-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17151; Mature: 17019
Theoretical pI: Translated: 9.94; Mature: 9.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xc96ff74)-; HASH(0xe038a98)-; HASH(0xe3c4648)-; HASH(0xe4237c4)-; HASH(0xdfa8f34)-;
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEKRLAQISVVLSTIIIMTYAFLSSYFLNKPLNLSSADLMYFALSNLLSLSLPFVCAWF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH PYLFVRPAAVTGSALSAFGLFLFFAITSSTMDDPKGAAAIWVIYFFWLIGAALAGVYPAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH FKPHFFTKTATRALVLSALFTVVVSFIIGFLISRIA HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH >Mature Secondary Structure TEKRLAQISVVLSTIIIMTYAFLSSYFLNKPLNLSSADLMYFALSNLLSLSLPFVCAWF CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH PYLFVRPAAVTGSALSAFGLFLFFAITSSTMDDPKGAAAIWVIYFFWLIGAALAGVYPAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH FKPHFFTKTATRALVLSALFTVVVSFIIGFLISRIA HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11248100