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The map label for this gene is tonB

Identifier: 15603053

GI number: 15603053

Start: 1383216

End: 1383986

Strand: Direct

Name: tonB

Synonym: PM1188

Alternate gene names: 15603053

Gene position: 1383216-1383986 (Clockwise)

Preceding gene: 15603052

Following gene: 15603054

Centisome position: 61.27

GC content: 43.19

Gene sequence:

>771_bases
ATGATAGATAAAAGTCGTTCTTGCATCGGGTTTGCAATTTCATTGCTTTTTCACGCAAGTTTTGTCTCTTTCCTGTATTG
GATTGTACAAAAAGACGATGACAGCGCGAATGGATTTGCTGCCGATATCATCTCAACTCATATTTCCATGGAAATGCTGG
CGGCTACCGTTTTAGAAGAACCAGAGCCGGAACCAGAGCCGGCGCCTCCGGTAGTAGAACCTGAACTGCCAAAAGAAGAA
GTCGCAGATCCGACGGTAAAACCTGAGCCACCAAAAGAACCCGAAAAACCAAAAGAGCCTGAAAAGCCAAAAGAGAAACC
GAAGGAAAAACCAAAAGAAAAGCCGAAAAAACCGAAGAAAGAACAACGTGATTTACCAAAGTCAGATCGCCAAATTGATT
CTAATTCATCGATCAATCAACAAGCGACCACAACAGGTAACATCACAACCAATAATCCGAATCTGGTCGGTAAAGGTAAT
AGCACAGATGAAGTCAATGCTTATCGCTCGGCTTTACGCAGAGAAATTGAAAAACATAAACGCTATCCAAACCGTGCACG
CATGATGCGCAAACAAGGTGTGGTAACAATCACGTTCCATCTTAATAATGCAGGCGTAATTAGTAATGCGCGAATCAGCA
AATCTTCTGGCTCAGAAGAATTAGATAACGCTGCACTGGTAGCTGTCAATAATGCCCGTCCAATTGGTCCACTGCCTGCA
GGTATGCCAAATGAAGTGAGCGTTCCTGTCAGTTTCAGAATCACAAATTAA

Upstream 100 bases:

>100_bases
CAAAATCCAGTTTCCAAGATTTCGTTTCTATCACTGATATTATGGCTAAAAATGAAATTAAAAATGTCGCTATCGTGACG
GTTAAAGAAAAGGCACCTCA

Downstream 100 bases:

>100_bases
AAAAGTGCGGTAAAATTTACCGCACTTTTTTCTCTCTATTAGAATTACTCTCATTTGTGTACTTATCTAGGACATCTTTC
ATAAAAACTTGTGCATTTTT

Product: TonB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MIDKSRSCIGFAISLLFHASFVSFLYWIVQKDDDSANGFAADIISTHISMEMLAATVLEEPEPEPEPAPPVVEPELPKEE
VADPTVKPEPPKEPEKPKEPEKPKEKPKEKPKEKPKKPKKEQRDLPKSDRQIDSNSSINQQATTTGNITTNNPNLVGKGN
STDEVNAYRSALRREIEKHKRYPNRARMMRKQGVVTITFHLNNAGVISNARISKSSGSEELDNAALVAVNNARPIGPLPA
GMPNEVSVPVSFRITN

Sequences:

>Translated_256_residues
MIDKSRSCIGFAISLLFHASFVSFLYWIVQKDDDSANGFAADIISTHISMEMLAATVLEEPEPEPEPAPPVVEPELPKEE
VADPTVKPEPPKEPEKPKEPEKPKEKPKEKPKEKPKKPKKEQRDLPKSDRQIDSNSSINQQATTTGNITTNNPNLVGKGN
STDEVNAYRSALRREIEKHKRYPNRARMMRKQGVVTITFHLNNAGVISNARISKSSGSEELDNAALVAVNNARPIGPLPA
GMPNEVSVPVSFRITN
>Mature_256_residues
MIDKSRSCIGFAISLLFHASFVSFLYWIVQKDDDSANGFAADIISTHISMEMLAATVLEEPEPEPEPAPPVVEPELPKEE
VADPTVKPEPPKEPEKPKEPEKPKEKPKEKPKEKPKKPKKEQRDLPKSDRQIDSNSSINQQATTTGNITTNNPNLVGKGN
STDEVNAYRSALRREIEKHKRYPNRARMMRKQGVVTITFHLNNAGVISNARISKSSGSEELDNAALVAVNNARPIGPLPA
GMPNEVSVPVSFRITN

Specific function: Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requirin

COG id: COG0810

COG function: function code M; Periplasmic protein TonB, links inner and outer membranes

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein; Periplasmic side

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): TONB_PASMU (Q9ZH79)

Other databases:

- EMBL:   AF070473
- EMBL:   AE004439
- RefSeq:   NP_246125.1
- ProteinModelPortal:   Q9ZH79
- GeneID:   1244535
- GenomeReviews:   AE004439_GR
- KEGG:   pmu:PM1188
- NMPDR:   fig|272843.1.peg.1188
- HOGENOM:   HBG495371
- OMA:   IDSSANV
- ProtClustDB:   CLSK870390
- BioCyc:   PMUL272843:PM1188-MONOMER
- InterPro:   IPR003538
- InterPro:   IPR006260
- PRINTS:   PR01374
- TIGRFAMs:   TIGR01352

Pfam domain/function: PF03544 TonB

EC number: NA

Molecular weight: Translated: 28306; Mature: 28306

Theoretical pI: Translated: 8.44; Mature: 8.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xb997c34)-;

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDKSRSCIGFAISLLFHASFVSFLYWIVQKDDDSANGFAADIISTHISMEMLAATVLEE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC
PEPEPEPAPPVVEPELPKEEVADPTVKPEPPKEPEKPKEPEKPKEKPKEKPKEKPKKPKK
CCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHCHHHCCCCCCH
EQRDLPKSDRQIDSNSSINQQATTTGNITTNNPNLVGKGNSTDEVNAYRSALRREIEKHK
HHHCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEECCCCCHHHHHHHHHHHHHHHHHH
RYPNRARMMRKQGVVTITFHLNNAGVISNARISKSSGSEELDNAALVAVNNARPIGPLPA
CCCHHHHHHHHCCCEEEEEEECCCCEECCCEECCCCCCHHHCCEEEEEECCCCCCCCCCC
GMPNEVSVPVSFRITN
CCCCCEECEEEEEECH
>Mature Secondary Structure
MIDKSRSCIGFAISLLFHASFVSFLYWIVQKDDDSANGFAADIISTHISMEMLAATVLEE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC
PEPEPEPAPPVVEPELPKEEVADPTVKPEPPKEPEKPKEPEKPKEKPKEKPKEKPKKPKK
CCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHCHHHCCCCCCH
EQRDLPKSDRQIDSNSSINQQATTTGNITTNNPNLVGKGNSTDEVNAYRSALRREIEKHK
HHHCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEECCCCCHHHHHHHHHHHHHHHHHH
RYPNRARMMRKQGVVTITFHLNNAGVISNARISKSSGSEELDNAALVAVNNARPIGPLPA
CCCHHHHHHHHCCCEEEEEEECCCCEECCCEECCCCCCHHHCCEEEEEECCCCCCCCCCC
GMPNEVSVPVSFRITN
CCCCCEECEEEEEECH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11248100