| Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
|---|---|
| Accession | NC_002663 |
| Length | 2,257,487 |
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The map label for this gene is yegM [C]
Identifier: 15602999
GI number: 15602999
Start: 1333193
End: 1334356
Strand: Reverse
Name: yegM [C]
Synonym: PM1134
Alternate gene names: 15602999
Gene position: 1334356-1333193 (Counterclockwise)
Preceding gene: 15603000
Following gene: 15602998
Centisome position: 59.11
GC content: 42.01
Gene sequence:
>1164_bases ATGAAAATCATTCTCGGCGTTATTGTCTTACTTTTTGCTGGGGTCATTATTTTTAATGTGATCAAAGGCAAAATGATTGA AAAATTTATTGCGGGTGCTGGGGAAAAAATTTATCCCGTAACTGCAATGACTATTCAGCCTCAGCAATGGACACCCGTGA TTGAAACCACTGGCATTGTGCGTCCTAATCAGGGTGCGATGTTAAGTGCACAGACATCAGGTACAGTACAGCAAGTCTTA GTTCAATCTGGACAGCACGTGAAGAAAGGCGAGGTGTTAGTGGTATTAGACAGTTCAGTAGAACTAGCGAATCTGAAAGC ATCCCAAGCTCAACTTTTATCTGTGAAAGCTACATACCAACGTTATTTAAGTTTGTATAAAACCAAGAGCGTGTCGCAAC AAGAACTTGATAATGCGAAATCTGCCTATGAAGCATTAGAGTCAAATATCGCTGCTTTAAAAGCGGGCATTGCACGTCGT CAGATTTTGGCGCCTTTTGATGGACAAACAGGTATTGTGAAAGTCAACGTCGGGCAATATGTCAATCCAGGAATGGAAAT TGTGCGTGTTGAAGACACCAGTAGTATGAAAATTGATTTCGCCCTTTCACAAACGGAATTGGAACACTTACATGTTGGAC AAAAAGTGACAGCGACTGCCGATGCGCGTAGTGGTGAAACCTTTGCGGCAAAGATTACTGCCATTGAACCTGCGATCAGC GCAACAACAGGGTTAATTGATGTACAAGCCACCTTTGAACCAGAAGATGGACGTAAACTCCTTTCTGGTATGTTTACTCG CTTACGGGTTGCTTTGCCGACAAAATATGATCAAGTCGTTGTGCCACAAGTCGCGATTAATTACAACATGTATGGGGAAA TTGCTTATATTCTTAGCGAACTTTCTGCAGAAGAGCGTGAAACATTAGTCGCACGACAGGATTTCGACCGCGAAAAAATT GACAATGCCTATCGGGTTAAACAAGTCACTGTATTTACCCAAGATCGTCAAGGGATTTATGCCCAGTTAAAAGGGGAAGA AATTAAACCCGGTGATAAAATTGTAACCGGTGGACAACAAAATTTAAGTAATGGCAGTTTAGTACTCGTCGCTGATAAAG CCGGGGTGGGAACCATGCAACCTGCTGTAAAAAATAACCTATAA
Upstream 100 bases:
>100_bases CATGGTGTGCTATTCAAAAATAATTTATCTTTTAATTTTACGGAGTTTTTGTATGAGTGTGACTCAAGCAAATCAACCAA AACGATCTCATTCGATTGCC
Downstream 100 bases:
>100_bases AGTGCGGTTCCAAAGAGGAAAAATTTGATGAACTACGCCTTATTATTAAAACAACTTGAACAAATTCTAGAACCTGAAAC CTATATCATTTCAAGAATGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 387; Mature: 387
Protein sequence:
>387_residues MKIILGVIVLLFAGVIIFNVIKGKMIEKFIAGAGEKIYPVTAMTIQPQQWTPVIETTGIVRPNQGAMLSAQTSGTVQQVL VQSGQHVKKGEVLVVLDSSVELANLKASQAQLLSVKATYQRYLSLYKTKSVSQQELDNAKSAYEALESNIAALKAGIARR QILAPFDGQTGIVKVNVGQYVNPGMEIVRVEDTSSMKIDFALSQTELEHLHVGQKVTATADARSGETFAAKITAIEPAIS ATTGLIDVQATFEPEDGRKLLSGMFTRLRVALPTKYDQVVVPQVAINYNMYGEIAYILSELSAEERETLVARQDFDREKI DNAYRVKQVTVFTQDRQGIYAQLKGEEIKPGDKIVTGGQQNLSNGSLVLVADKAGVGTMQPAVKNNL
Sequences:
>Translated_387_residues MKIILGVIVLLFAGVIIFNVIKGKMIEKFIAGAGEKIYPVTAMTIQPQQWTPVIETTGIVRPNQGAMLSAQTSGTVQQVL VQSGQHVKKGEVLVVLDSSVELANLKASQAQLLSVKATYQRYLSLYKTKSVSQQELDNAKSAYEALESNIAALKAGIARR QILAPFDGQTGIVKVNVGQYVNPGMEIVRVEDTSSMKIDFALSQTELEHLHVGQKVTATADARSGETFAAKITAIEPAIS ATTGLIDVQATFEPEDGRKLLSGMFTRLRVALPTKYDQVVVPQVAINYNMYGEIAYILSELSAEERETLVARQDFDREKI DNAYRVKQVTVFTQDRQGIYAQLKGEEIKPGDKIVTGGQQNLSNGSLVLVADKAGVGTMQPAVKNNL >Mature_387_residues MKIILGVIVLLFAGVIIFNVIKGKMIEKFIAGAGEKIYPVTAMTIQPQQWTPVIETTGIVRPNQGAMLSAQTSGTVQQVL VQSGQHVKKGEVLVVLDSSVELANLKASQAQLLSVKATYQRYLSLYKTKSVSQQELDNAKSAYEALESNIAALKAGIARR QILAPFDGQTGIVKVNVGQYVNPGMEIVRVEDTSSMKIDFALSQTELEHLHVGQKVTATADARSGETFAAKITAIEPAIS ATTGLIDVQATFEPEDGRKLLSGMFTRLRVALPTKYDQVVVPQVAINYNMYGEIAYILSELSAEERETLVARQDFDREKI DNAYRVKQVTVFTQDRQGIYAQLKGEEIKPGDKIVTGGQQNLSNGSLVLVADKAGVGTMQPAVKNNL
Specific function: Unknown
COG id: COG0845
COG function: function code M; Membrane-fusion protein
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]
Homologues:
Organism=Escherichia coli, GI87082036, Length=311, Percent_Identity=28.6173633440514, Blast_Score=89, Evalue=4e-19, Organism=Escherichia coli, GI1789929, Length=322, Percent_Identity=25.1552795031056, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI87081796, Length=287, Percent_Identity=26.4808362369338, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI1789665, Length=277, Percent_Identity=25.9927797833935, Blast_Score=62, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006143 [H]
Pfam domain/function: PF00529 HlyD [H]
EC number: NA
Molecular weight: Translated: 42059; Mature: 42059
Theoretical pI: Translated: 8.59; Mature: 8.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIILGVIVLLFAGVIIFNVIKGKMIEKFIAGAGEKIYPVTAMTIQPQQWTPVIETTGIV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCHHHCCCEE RPNQGAMLSAQTSGTVQQVLVQSGQHVKKGEVLVVLDSSVELANLKASQAQLLSVKATYQ ECCCCCEEEECCCCHHHHHHHHCCCCCCCCCEEEEECCCCEEECCCCCHHHHHHHHHHHH RYLSLYKTKSVSQQELDNAKSAYEALESNIAALKAGIARRQILAPFDGQTGIVKVNVGQY HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCEEEEECCCC VNPGMEIVRVEDTSSMKIDFALSQTELEHLHVGQKVTATADARSGETFAAKITAIEPAIS CCCCCEEEEEECCCCEEEEEEECHHHHHHHHCCCEEEEECCCCCCCEEEEEEEEECCCHH ATTGLIDVQATFEPEDGRKLLSGMFTRLRVALPTKYDQVVVPQVAINYNMYGEIAYILSE CCCCEEEEEEEECCCHHHHHHHHHHHHHEEECCCCCCCEEECEEEEECCHHHHHHHHHHH LSAEERETLVARQDFDREKIDNAYRVKQVTVFTQDRQGIYAQLKGEEIKPGDKIVTGGQQ HCHHHHHHHHHHHCCCHHHHCCCEEEEEEEEEECCCCCEEEEECCCCCCCCCEEEECCCC NLSNGSLVLVADKAGVGTMQPAVKNNL CCCCCCEEEEECCCCCCCCCCHHHCCC >Mature Secondary Structure MKIILGVIVLLFAGVIIFNVIKGKMIEKFIAGAGEKIYPVTAMTIQPQQWTPVIETTGIV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCHHHCCCEE RPNQGAMLSAQTSGTVQQVLVQSGQHVKKGEVLVVLDSSVELANLKASQAQLLSVKATYQ ECCCCCEEEECCCCHHHHHHHHCCCCCCCCCEEEEECCCCEEECCCCCHHHHHHHHHHHH RYLSLYKTKSVSQQELDNAKSAYEALESNIAALKAGIARRQILAPFDGQTGIVKVNVGQY HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCEEEEECCCC VNPGMEIVRVEDTSSMKIDFALSQTELEHLHVGQKVTATADARSGETFAAKITAIEPAIS CCCCCEEEEEECCCCEEEEEEECHHHHHHHHCCCEEEEECCCCCCCEEEEEEEEECCCHH ATTGLIDVQATFEPEDGRKLLSGMFTRLRVALPTKYDQVVVPQVAINYNMYGEIAYILSE CCCCEEEEEEEECCCHHHHHHHHHHHHHEEECCCCCCCEEECEEEEECCHHHHHHHHHHH LSAEERETLVARQDFDREKIDNAYRVKQVTVFTQDRQGIYAQLKGEEIKPGDKIVTGGQQ HCHHHHHHHHHHHCCCHHHHCCCEEEEEEEEEECCCCCEEEEECCCCCCCCCEEEECCCC NLSNGSLVLVADKAGVGTMQPAVKNNL CCCCCCEEEEECCCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]