Click here to switch to the map view.

The map label for this gene is perM [H]

Identifier: 15602996

GI number: 15602996

Start: 1328492

End: 1329556

Strand: Direct

Name: perM [H]

Synonym: PM1131

Alternate gene names: 15602996

Gene position: 1328492-1329556 (Clockwise)

Preceding gene: 15602989

Following gene: 15603003

Centisome position: 58.85

GC content: 40.38

Gene sequence:

>1065_bases
ATGATCGAAATGTTGAAAAACTGGTATAACAACCGTTTTAGTGATCCACAAGCCATGGGGTTGTTTGCCATCTTACTCTT
TGGTTTTATATCCATTTATTTTTTTAGTCACCTCATTGCACCACTCCTCATCGCTATTGTATTAGCTTATTTATTGGAAT
GGCCAATTCGCGTTCTCACAGAAAAACTCAAGTTTCCACGCCTACTCTCAACTGCCATTATTTTTGGTGGTTTTTTAGGG
TTGATCCTCGTTATCGTATTGGTCTTCATTCCAACGTTATGGACTCAAACCTTGAATTTAGTGACTGATTTGCCACATAT
GTTTAATAAACTCAATGAGTGGTTACTTTCTCTACCTGAACATTATCCCGAGCTAGTGGATTACCAAACCATTGATTCTG
TATTAAGTACTGTCCGCTCCAAAATTCTTGGCTTTGGTGAATCCGCCCTCAAATTCTCCCTGACCTCGTTATTAAGCCTG
GTCACCCTAGGGATTTATGCGTTTTTAGTGCCTTTAATGGTGTTCTTTTTATTAAAAGATAAAACAGAATTAATCGCCAG
TGTAAGCCGTTTCCTTCCGCGTAACCGTACGCTAGCCTCGAGCGTTTGGAAAGAAATGCAACAACAAATTGCGAATTATA
TTCGCGGTAAATTATTCGAAATCATCATTGTCACCGCTGTGACTTACGCGATTTTCATCTTCTTTAACTTAAATTATTCG
TTATTGTTAGCTGTTGCGGTAGGGCTATCCGTGCTCGTGCCTTATATTGGTGCCGTCCTTGTCACGATTCCTATTGCCCT
CGTTGCCGTCGCGCAATTTGGCATCACTCCTACTTTTTGGTATATCATTACTGCCTACGTCATCAGCCAAATTTTAGACG
GTAACTTATTAGTCCCATTCCTTTTTTCTGAAGCCGTCAATTTGCACCCTCTAACCATTATTATCGCGGTATTAATTTTT
GGTGGATTATGGGGCTTTTGGGGCGTTTTCTTCGCTATTCCATTAGCCACTTTAGTCAAAGCTGTGGTGAATGCATGGCC
ATCAACCGAACAAGATACACGTTAA

Upstream 100 bases:

>100_bases
ATGATATATAGTCACGCACATAGAATTTCCTCGCTTAATGATATGATCTTATTAGATTTTACCTTATAATCGCTCAAAAT
GCCTAAATTAAGGATATCTT

Downstream 100 bases:

>100_bases
TTCTGTTTTTCACGCAAAAAATACCGCACTTTTGTGCGGTATTTTTTTATGTTGAAATTAATGTGCGCTATTATCCGTTA
ACGGTTTTATGCTTTCATCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 354; Mature: 354

Protein sequence:

>354_residues
MIEMLKNWYNNRFSDPQAMGLFAILLFGFISIYFFSHLIAPLLIAIVLAYLLEWPIRVLTEKLKFPRLLSTAIIFGGFLG
LILVIVLVFIPTLWTQTLNLVTDLPHMFNKLNEWLLSLPEHYPELVDYQTIDSVLSTVRSKILGFGESALKFSLTSLLSL
VTLGIYAFLVPLMVFFLLKDKTELIASVSRFLPRNRTLASSVWKEMQQQIANYIRGKLFEIIIVTAVTYAIFIFFNLNYS
LLLAVAVGLSVLVPYIGAVLVTIPIALVAVAQFGITPTFWYIITAYVISQILDGNLLVPFLFSEAVNLHPLTIIIAVLIF
GGLWGFWGVFFAIPLATLVKAVVNAWPSTEQDTR

Sequences:

>Translated_354_residues
MIEMLKNWYNNRFSDPQAMGLFAILLFGFISIYFFSHLIAPLLIAIVLAYLLEWPIRVLTEKLKFPRLLSTAIIFGGFLG
LILVIVLVFIPTLWTQTLNLVTDLPHMFNKLNEWLLSLPEHYPELVDYQTIDSVLSTVRSKILGFGESALKFSLTSLLSL
VTLGIYAFLVPLMVFFLLKDKTELIASVSRFLPRNRTLASSVWKEMQQQIANYIRGKLFEIIIVTAVTYAIFIFFNLNYS
LLLAVAVGLSVLVPYIGAVLVTIPIALVAVAQFGITPTFWYIITAYVISQILDGNLLVPFLFSEAVNLHPLTIIIAVLIF
GGLWGFWGVFFAIPLATLVKAVVNAWPSTEQDTR
>Mature_354_residues
MIEMLKNWYNNRFSDPQAMGLFAILLFGFISIYFFSHLIAPLLIAIVLAYLLEWPIRVLTEKLKFPRLLSTAIIFGGFLG
LILVIVLVFIPTLWTQTLNLVTDLPHMFNKLNEWLLSLPEHYPELVDYQTIDSVLSTVRSKILGFGESALKFSLTSLLSL
VTLGIYAFLVPLMVFFLLKDKTELIASVSRFLPRNRTLASSVWKEMQQQIANYIRGKLFEIIIVTAVTYAIFIFFNLNYS
LLLAVAVGLSVLVPYIGAVLVTIPIALVAVAQFGITPTFWYIITAYVISQILDGNLLVPFLFSEAVNLHPLTIIIAVLIF
GGLWGFWGVFFAIPLATLVKAVVNAWPSTEQDTR

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1788838, Length=350, Percent_Identity=56.8571428571429, Blast_Score=398, Evalue=1e-112,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 39847; Mature: 39847

Theoretical pI: Translated: 8.66; Mature: 8.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEMLKNWYNNRFSDPQAMGLFAILLFGFISIYFFSHLIAPLLIAIVLAYLLEWPIRVLT
CHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EKLKFPRLLSTAIIFGGFLGLILVIVLVFIPTLWTQTLNLVTDLPHMFNKLNEWLLSLPE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HYPELVDYQTIDSVLSTVRSKILGFGESALKFSLTSLLSLVTLGIYAFLVPLMVFFLLKD
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KTELIASVSRFLPRNRTLASSVWKEMQQQIANYIRGKLFEIIIVTAVTYAIFIFFNLNYS
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
LLLAVAVGLSVLVPYIGAVLVTIPIALVAVAQFGITPTFWYIITAYVISQILDGNLLVPF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHH
LFSEAVNLHPLTIIIAVLIFGGLWGFWGVFFAIPLATLVKAVVNAWPSTEQDTR
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MIEMLKNWYNNRFSDPQAMGLFAILLFGFISIYFFSHLIAPLLIAIVLAYLLEWPIRVLT
CHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EKLKFPRLLSTAIIFGGFLGLILVIVLVFIPTLWTQTLNLVTDLPHMFNKLNEWLLSLPE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HYPELVDYQTIDSVLSTVRSKILGFGESALKFSLTSLLSLVTLGIYAFLVPLMVFFLLKD
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KTELIASVSRFLPRNRTLASSVWKEMQQQIANYIRGKLFEIIIVTAVTYAIFIFFNLNYS
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
LLLAVAVGLSVLVPYIGAVLVTIPIALVAVAQFGITPTFWYIITAYVISQILDGNLLVPF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHH
LFSEAVNLHPLTIIIAVLIFGGLWGFWGVFFAIPLATLVKAVVNAWPSTEQDTR
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]